RNA–Protein interactions for RNA: ENST00000631210.1

MECP2-220, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best)

Gene MECP2, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-220ENST00000631210 MINDY2Q8NBR6 621 aa6.55□□□□□ -1.36
MECP2-220ENST00000631210 DMBX1Q8NFW5 382 aa6.55□□□□□ -1.36
MECP2-220ENST00000631210 LINC01006Q8NI28 216 aa6.55□□□□□ -1.36
MECP2-220ENST00000631210 OR10C1Q96KK4 312 aa6.55□□□□□ -1.36
MECP2-220ENST00000631210 RASL11BQ9BPW5 248 aa6.55□□□□□ -1.36
MECP2-220ENST00000631210 FAM103A1Q9BTL3 118 aaKnown RBP6.55□□□□□ -1.36
MECP2-220ENST00000631210 QTRT1Q9BXR0 403 aaKnown RBP6.55□□□□□ -1.36
MECP2-220ENST00000631210 NPFFR1Q9GZQ6 430 aa6.55□□□□□ -1.36
MECP2-220ENST00000631210 OR51J1Q9H342 316 aa6.55□□□□□ -1.36
MECP2-220ENST00000631210 RAB18Q9NP72 206 aa6.55□□□□□ -1.36
MECP2-220ENST00000631210 KIAA1456Q9P272 454 aa6.55□□□□□ -1.36
MECP2-220ENST00000631210 CACNG5Q9UF02 275 aa6.55□□□□□ -1.36
MECP2-220ENST00000631210 FOXA2Q9Y261 457 aaPredicted RBP6.55□□□□□ -1.36
MECP2-220ENST00000631210 IGLC7A0M8Q6 106 aa6.54□□□□□ -1.36
MECP2-220ENST00000631210 ST8SIA3O43173 380 aa6.54□□□□□ -1.36
MECP2-220ENST00000631210 SOX15O60248 233 aa6.54□□□□□ -1.36
MECP2-220ENST00000631210 HKR1P10072 659 aa6.54□□□□□ -1.36
MECP2-220ENST00000631210 SLC25A6P12236 298 aa6.54□□□□□ -1.36
MECP2-220ENST00000631210 CXCL3P19876 107 aa6.54□□□□□ -1.36
MECP2-220ENST00000631210 PPIFP30405 207 aaKnown RBP6.54□□□□□ -1.36
MECP2-220ENST00000631210 MAS1LP35410 378 aa6.54□□□□□ -1.36
MECP2-220ENST00000631210 AKR1C2P52895 323 aa6.54□□□□□ -1.36
MECP2-220ENST00000631210 KRTAP10-3P60369 221 aa6.54□□□□□ -1.36
MECP2-220ENST00000631210 ERVK-16P61578 105 aa6.54□□□□□ -1.36
MECP2-220ENST00000631210 FXYD3Q14802 87 aa6.54□□□□□ -1.36
MECP2-220ENST00000631210 PDLIM3Q53GG5 364 aaPredicted RBP6.54□□□□□ -1.36
MECP2-220ENST00000631210 C10orf99Q6UWK7 81 aa6.54□□□□□ -1.36
MECP2-220ENST00000631210 H2BFWTQ7Z2G1 175 aa6.54□□□□□ -1.36
MECP2-220ENST00000631210 MMD2Q8IY49 270 aa6.54□□□□□ -1.36
MECP2-220ENST00000631210 OR11H7Q8NGC8 314 aa6.54□□□□□ -1.36
MECP2-220ENST00000631210 OR10W1Q8NGF6 305 aa6.54□□□□□ -1.36
MECP2-220ENST00000631210 OR4D5Q8NGN0 318 aa6.54□□□□□ -1.36
MECP2-220ENST00000631210 COQ8AQ8NI60 647 aa6.54□□□□□ -1.36
MECP2-220ENST00000631210 VSTM2AQ8TAG5 236 aa6.54□□□□□ -1.36
MECP2-220ENST00000631210 SRSF12Q8WXF0 261 aaKnown RBP6.54□□□□□ -1.36
MECP2-220ENST00000631210 NOL4LQ96MY1 436 aaPredicted RBP6.54□□□□□ -1.36
MECP2-220ENST00000631210 PHB2Q99623 299 aa6.54□□□□□ -1.36
MECP2-220ENST00000631210 AIFM2Q9BRQ8 373 aa6.54□□□□□ -1.36
MECP2-220ENST00000631210 PRSS22Q9GZN4 317 aa6.54□□□□□ -1.36
MECP2-220ENST00000631210 NDUFA4L2Q9NRX3 87 aa6.54□□□□□ -1.36
MECP2-220ENST00000631210 COA4Q9NYJ1 87 aa6.54□□□□□ -1.36
MECP2-220ENST00000631210 LINC00527Q9UJ94 153 aa6.54□□□□□ -1.36
MECP2-220ENST00000631210 ZNF580Q9UK33 172 aa6.54□□□□□ -1.36
MECP2-220ENST00000631210 TMED3Q9Y3Q3 217 aa6.54□□□□□ -1.36
MECP2-220ENST00000631210 A0A1B0GU03 582 aa6.53□□□□□ -1.36
MECP2-220ENST00000631210 A0A1B0GVG6 124 aa6.53□□□□□ -1.36
MECP2-220ENST00000631210 TMEM89A2RUT3 159 aa6.53□□□□□ -1.36
MECP2-220ENST00000631210 HMX3A6NHT5 357 aa6.53□□□□□ -1.36
MECP2-220ENST00000631210 G3V318 75 aa6.53□□□□□ -1.36
MECP2-220ENST00000631210 CREBL2O60519 120 aaPredicted RBP6.53□□□□□ -1.36
MECP2-220ENST00000631210 RBMXL2O75526 392 aaKnown RBP6.53□□□□□ -1.36
MECP2-220ENST00000631210 SIX6O95475 246 aa6.53□□□□□ -1.36
MECP2-220ENST00000631210 OPN1MWP04001 364 aa6.53□□□□□ -1.36
MECP2-220ENST00000631210 SULT1A3P0DMM9 295 aa6.53□□□□□ -1.36
MECP2-220ENST00000631210 SULT1A4P0DMN0 295 aa6.53□□□□□ -1.36
MECP2-220ENST00000631210 OPN1MW2P0DN77 364 aa6.53□□□□□ -1.36
MECP2-220ENST00000631210 OPN1MW3P0DN78 364 aa6.53□□□□□ -1.36
MECP2-220ENST00000631210 MDKP21741 143 aaPredicted RBP6.53□□□□□ -1.36
MECP2-220ENST00000631210 H2BFSP57053 126 aa6.53□□□□□ -1.36
MECP2-220ENST00000631210 RIPPLY3P57055 190 aa6.53□□□□□ -1.36
MECP2-220ENST00000631210 PROK1P58294 105 aa6.53□□□□□ -1.36
MECP2-220ENST00000631210 HSPE1P61604 102 aaKnown RBP6.53□□□□□ -1.36
MECP2-220ENST00000631210 WT1-ASQ06250 92 aa6.53□□□□□ -1.36
MECP2-220ENST00000631210 SRSF4Q08170 494 aaKnown RBP6.53□□□□□ -1.36
MECP2-220ENST00000631210 FCN2Q15485 313 aa6.53□□□□□ -1.36
MECP2-220ENST00000631210 TNXAQ16473 311 aa6.53□□□□□ -1.36
MECP2-220ENST00000631210 KLK9Q2XQG4 91 aa6.53□□□□□ -1.36
MECP2-220ENST00000631210 CXorf66Q5JRM2 361 aaPredicted RBP6.53□□□□□ -1.36
MECP2-220ENST00000631210 C19orf35Q6ZS72 473 aa6.53□□□□□ -1.36
MECP2-220ENST00000631210 SLC35E3Q7Z769 313 aa6.53□□□□□ -1.36
MECP2-220ENST00000631210 SGMS2Q8NHU3 365 aa6.53□□□□□ -1.36
MECP2-220ENST00000631210 ARPC1AQ92747 370 aa6.53□□□□□ -1.36
MECP2-220ENST00000631210 C11orf1Q9H5F2 150 aa6.53□□□□□ -1.36
MECP2-220ENST00000631210 GPN1Q9HCN4 374 aaPredicted RBP6.53□□□□□ -1.36
MECP2-220ENST00000631210 KLK9Q9UKQ9 250 aa6.53□□□□□ -1.36
MECP2-220ENST00000631210 ZNF257Q9Y2Q1 563 aa6.53□□□□□ -1.36
MECP2-220ENST00000631210 DMRT1Q9Y5R6 373 aa6.53□□□□□ -1.36
MECP2-220ENST00000631210 MSGN1A6NI15 193 aa6.52□□□□□ -1.37
MECP2-220ENST00000631210 INS-IGF2F8WCM5 200 aa6.52□□□□□ -1.37
MECP2-220ENST00000631210 ATG12O94817 140 aa6.52□□□□□ -1.37
MECP2-220ENST00000631210 NXPH3O95157 252 aa6.52□□□□□ -1.37
MECP2-220ENST00000631210 APELAP0DMC3 54 aa6.52□□□□□ -1.37
MECP2-220ENST00000631210 AREGP15514 252 aa6.52□□□□□ -1.37
MECP2-220ENST00000631210 VDAC2P45880 294 aaPredicted RBP6.52□□□□□ -1.37
MECP2-220ENST00000631210 RPL27AP46776 148 aaKnown RBP6.52□□□□□ -1.37
MECP2-220ENST00000631210 MFAP2P55001 183 aa6.52□□□□□ -1.37
MECP2-220ENST00000631210 GNB1P62873 340 aa6.52□□□□□ -1.37
MECP2-220ENST00000631210 PRCDQ00LT1 54 aa6.52□□□□□ -1.37
MECP2-220ENST00000631210 ID3Q02535 119 aa6.52□□□□□ -1.37
MECP2-220ENST00000631210 TNFRSF9Q07011 255 aa6.52□□□□□ -1.37
MECP2-220ENST00000631210 KIAA0141Q14154 515 aaPredicted RBP6.52□□□□□ -1.37
MECP2-220ENST00000631210 SMCO1Q147U7 214 aa6.52□□□□□ -1.37
MECP2-220ENST00000631210 PLGLAQ15195 96 aa6.52□□□□□ -1.37
MECP2-220ENST00000631210 SPINK9Q5DT21 86 aa6.52□□□□□ -1.37
MECP2-220ENST00000631210 TCTEX1D4Q5JR98 221 aa6.52□□□□□ -1.37
MECP2-220ENST00000631210 C9orf152Q5JTZ5 239 aa6.52□□□□□ -1.37
MECP2-220ENST00000631210 STPG2Q8N412 459 aa6.52□□□□□ -1.37
MECP2-220ENST00000631210 ZBTB8BQ8NAP8 495 aaPredicted RBP6.52□□□□□ -1.37
MECP2-220ENST00000631210 LFNGQ8NES3 379 aa6.52□□□□□ -1.37
MECP2-220ENST00000631210 OR5M8Q8NGP6 311 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms