RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 OR4S2Q8NH73 311 aa10□□□□□ -0.81
PNKP-217ENST00000625216 CD300LFQ8TDQ1 290 aa10□□□□□ -0.81
PNKP-217ENST00000625216 PPP1R14BQ96C90 147 aa10□□□□□ -0.81
PNKP-217ENST00000625216 GPR146Q96CH1 333 aa10□□□□□ -0.81
PNKP-217ENST00000625216 C2orf50Q96LR7 162 aa10□□□□□ -0.81
PNKP-217ENST00000625216 COMMD9Q9P000 198 aa10□□□□□ -0.81
PNKP-217ENST00000625216 TSSC4Q9Y5U2 329 aaPredicted RBP10□□□□□ -0.81
PNKP-217ENST00000625216 TCRBV4S1A1TA0A5B7 111 aa9.99□□□□□ -0.81
PNKP-217ENST00000625216 CRYZL1O95825 349 aa9.99□□□□□ -0.81
PNKP-217ENST00000625216 HPRT1P00492 218 aa9.99□□□□□ -0.81
PNKP-217ENST00000625216 IGKV1D-33P01593 117 aa9.99□□□□□ -0.81
PNKP-217ENST00000625216 IGKV1-33P01594 117 aa9.99□□□□□ -0.81
PNKP-217ENST00000625216 APOA2P02652 100 aa9.99□□□□□ -0.81
PNKP-217ENST00000625216 C1QBP02746 253 aa9.99□□□□□ -0.81
PNKP-217ENST00000625216 CD1BP29016 333 aa9.99□□□□□ -0.81
PNKP-217ENST00000625216 G6PCP35575 357 aa9.99□□□□□ -0.81
PNKP-217ENST00000625216 NKX2-5P52952 324 aaPredicted RBP9.99□□□□□ -0.81
PNKP-217ENST00000625216 ZFP69Q49AA0 526 aa9.99□□□□□ -0.81
PNKP-217ENST00000625216 FBLN7Q53RD9 439 aa9.99□□□□□ -0.81
PNKP-217ENST00000625216 KPRPQ5T749 579 aaPredicted RBP9.99□□□□□ -0.81
PNKP-217ENST00000625216 SAMD5Q5TGI4 173 aa9.99□□□□□ -0.81
PNKP-217ENST00000625216 C5orf56Q8N8D9 126 aa9.99□□□□□ -0.81
PNKP-217ENST00000625216 WFDC9Q8NEX5 89 aa9.99□□□□□ -0.81
PNKP-217ENST00000625216 OR11H4Q8NGC9 324 aa9.99□□□□□ -0.81
PNKP-217ENST00000625216 OR8H1Q8NGG4 311 aa9.99□□□□□ -0.81
PNKP-217ENST00000625216 OR2T10Q8NGZ9 312 aa9.99□□□□□ -0.81
PNKP-217ENST00000625216 ASB13Q8WXK3 278 aa9.99□□□□□ -0.81
PNKP-217ENST00000625216 LSM10Q969L4 123 aaKnown RBP9.99□□□□□ -0.81
PNKP-217ENST00000625216 NMES1Q9C002 83 aa9.99□□□□□ -0.81
PNKP-217ENST00000625216 PLEKHA2Q9HB19 425 aa9.99□□□□□ -0.81
PNKP-217ENST00000625216 IGHV3-72A0A0B4J1Y9 119 aa9.98□□□□□ -0.81
PNKP-217ENST00000625216 IGKV1-16P04430 117 aa9.98□□□□□ -0.81
PNKP-217ENST00000625216 HNF4GQ14541 408 aa9.98□□□□□ -0.81
PNKP-217ENST00000625216 RTL8BQ17RB0 113 aa9.98□□□□□ -0.81
PNKP-217ENST00000625216 BEAN1Q3B7T3 259 aa9.98□□□□□ -0.81
PNKP-217ENST00000625216 TCTEX1D4Q5JR98 221 aa9.98□□□□□ -0.81
PNKP-217ENST00000625216 Q6ZRM9 215 aa9.98□□□□□ -0.81
PNKP-217ENST00000625216 C1QL4Q86Z23 238 aa9.98□□□□□ -0.81
PNKP-217ENST00000625216 OR4D5Q8NGN0 318 aa9.98□□□□□ -0.81
PNKP-217ENST00000625216 RNASE11Q8TAA1 199 aaKnown RBP9.98□□□□□ -0.81
PNKP-217ENST00000625216 PPP1R1CQ8WVI7 109 aa9.98□□□□□ -0.81
PNKP-217ENST00000625216 EAF1Q96JC9 268 aaPredicted RBP9.98□□□□□ -0.81
PNKP-217ENST00000625216 SPIN2AQ99865 258 aa9.98□□□□□ -0.81
PNKP-217ENST00000625216 SPIN2BQ9BPZ2 258 aa9.98□□□□□ -0.81
PNKP-217ENST00000625216 PSMB11A5LHX3 300 aa9.97□□□□□ -0.81
PNKP-217ENST00000625216 SH2D7A6NKC9 451 aaPredicted RBP9.97□□□□□ -0.81
PNKP-217ENST00000625216 MARCH11A6NNE9 402 aa9.97□□□□□ -0.81
PNKP-217ENST00000625216 G3V4G9 280 aa9.97□□□□□ -0.81
PNKP-217ENST00000625216 KRASP01116 189 aa9.97□□□□□ -0.81
PNKP-217ENST00000625216 IGHG2P01859 326 aa9.97□□□□□ -0.81
PNKP-217ENST00000625216 OR9G9P0C7N8 305 aa9.97□□□□□ -0.81
PNKP-217ENST00000625216 RRASP10301 218 aa9.97□□□□□ -0.81
PNKP-217ENST00000625216 RAB32Q13637 225 aa9.97□□□□□ -0.81
PNKP-217ENST00000625216 LRRC37A5PQ49AS3 106 aa9.97□□□□□ -0.81
PNKP-217ENST00000625216 TMEM177Q53S58 311 aa9.97□□□□□ -0.81
PNKP-217ENST00000625216 THOC7Q6I9Y2 204 aaKnown RBP9.97□□□□□ -0.81
PNKP-217ENST00000625216 NOXA1Q86UR1 476 aa9.97□□□□□ -0.81
PNKP-217ENST00000625216 PDPNQ86YL7 162 aa9.97□□□□□ -0.81
PNKP-217ENST00000625216 VKORC1L1Q8N0U8 176 aa9.97□□□□□ -0.81
PNKP-217ENST00000625216 COMMD1Q8N668 190 aa9.97□□□□□ -0.81
PNKP-217ENST00000625216 Q8N6K4 173 aa9.97□□□□□ -0.81
PNKP-217ENST00000625216 GSKIPQ9P0R6 139 aa9.97□□□□□ -0.81
PNKP-217ENST00000625216 CACNG5Q9UF02 275 aa9.97□□□□□ -0.81
PNKP-217ENST00000625216 WASHC3Q9Y3C0 194 aa9.97□□□□□ -0.81
PNKP-217ENST00000625216 PRKDCP78527 4128 aaKnown RBP9.96□□□□□ -0.81
PNKP-217ENST00000625216 PIGBOS1A0A0B4J2F0 54 aa9.96□□□□□ -0.82
PNKP-217ENST00000625216 A0A1B0GU03 582 aa9.96□□□□□ -0.82
PNKP-217ENST00000625216 NCBP2LA6PVI3 153 aaKnown RBP9.96□□□□□ -0.82
PNKP-217ENST00000625216 SRRM4A7MD48 611 aaKnown RBP9.96□□□□□ -0.82
PNKP-217ENST00000625216 H0YIZ8 118 aa9.96□□□□□ -0.82
PNKP-217ENST00000625216 H7C2Y5 167 aa9.96□□□□□ -0.82
PNKP-217ENST00000625216 PITX3O75364 302 aa9.96□□□□□ -0.82
PNKP-217ENST00000625216 SCGB1D2O95969 90 aa9.96□□□□□ -0.82
PNKP-217ENST00000625216 MOSP00540 346 aa9.96□□□□□ -0.82
PNKP-217ENST00000625216 MBPP02686 304 aaPredicted RBP9.96□□□□□ -0.82
PNKP-217ENST00000625216 PF4V1P10720 104 aa9.96□□□□□ -0.82
PNKP-217ENST00000625216 SLC25A6P12236 298 aa9.96□□□□□ -0.82
PNKP-217ENST00000625216 NQO2P16083 231 aa9.96□□□□□ -0.82
PNKP-217ENST00000625216 EIF2B2P49770 351 aaKnown RBP9.96□□□□□ -0.82
PNKP-217ENST00000625216 SLC35B1P78383 322 aa9.96□□□□□ -0.82
PNKP-217ENST00000625216 CYCSP99999 105 aaKnown RBP9.96□□□□□ -0.82
PNKP-217ENST00000625216 TAGLNQ01995 201 aaKnown RBP9.96□□□□□ -0.82
PNKP-217ENST00000625216 SMCO1Q147U7 214 aa9.96□□□□□ -0.82
PNKP-217ENST00000625216 POU2AF1Q16633 256 aa9.96□□□□□ -0.82
PNKP-217ENST00000625216 SSX9Q7RTT3 188 aa9.96□□□□□ -0.82
PNKP-217ENST00000625216 REC114Q7Z4M0 266 aa9.96□□□□□ -0.82
PNKP-217ENST00000625216 SLC35E3Q7Z769 313 aa9.96□□□□□ -0.82
PNKP-217ENST00000625216 FOXRED2Q8IWF2 684 aa9.96□□□□□ -0.82
PNKP-217ENST00000625216 GRPEL2Q8TAA5 225 aa9.96□□□□□ -0.82
PNKP-217ENST00000625216 RRNAD1Q96FB5 475 aaKnown RBP9.96□□□□□ -0.82
PNKP-217ENST00000625216 HARBI1Q96MB7 349 aa9.96□□□□□ -0.82
PNKP-217ENST00000625216 ZFP57Q9NU63 452 aa9.96□□□□□ -0.82
PNKP-217ENST00000625216 TMEM140Q9NV12 185 aa9.96□□□□□ -0.82
PNKP-217ENST00000625216 NOTCH3Q9UM47 2321 aa9.96□□□□□ -0.82
PNKP-217ENST00000625216 A0A1W2PRX2 142 aa9.95□□□□□ -0.82
PNKP-217ENST00000625216 K7EPK0 472 aa9.95□□□□□ -0.82
PNKP-217ENST00000625216 ATG12O94817 140 aa9.95□□□□□ -0.82
PNKP-217ENST00000625216 NXPH3O95157 252 aa9.95□□□□□ -0.82
PNKP-217ENST00000625216 MPC2O95563 127 aa9.95□□□□□ -0.82
PNKP-217ENST00000625216 S100A10P60903 97 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms