RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 WDR83OSQ9Y284 106 aa13.3□□□□□ -0.28
LDB3-208ENST00000623007 KLF2Q9Y5W3 355 aaPredicted RBP13.3□□□□□ -0.28
LDB3-208ENST00000623007 LOC105371242A0A075B767 164 aa13.29□□□□□ -0.28
LDB3-208ENST00000623007 BUB1B-PAK6H3BSN5 160 aa13.29□□□□□ -0.28
LDB3-208ENST00000623007 AGPAT2O15120 278 aa13.29□□□□□ -0.28
LDB3-208ENST00000623007 C1QL1O75973 258 aa13.29□□□□□ -0.28
LDB3-208ENST00000623007 SFTA3P0C7M3 94 aa13.29□□□□□ -0.28
LDB3-208ENST00000623007 FHITP49789 147 aa13.29□□□□□ -0.28
LDB3-208ENST00000623007 SUB1P53999 127 aaKnown RBP eCLIP13.29□□□□□ -0.28
LDB3-208ENST00000623007 ACOT6Q3I5F7 207 aaPredicted RBP13.29□□□□□ -0.28
LDB3-208ENST00000623007 SUN5Q8TC36 379 aa13.29□□□□□ -0.28
LDB3-208ENST00000623007 SFT2D1Q8WV19 159 aa13.29□□□□□ -0.28
LDB3-208ENST00000623007 RSG1Q9BU20 258 aa13.29□□□□□ -0.28
LDB3-208ENST00000623007 NPCDR1Q9BY65 106 aa13.29□□□□□ -0.28
LDB3-208ENST00000623007 SLC35B3Q9H1N7 401 aa13.29□□□□□ -0.28
LDB3-208ENST00000623007 UBTD1Q9HAC8 227 aa13.29□□□□□ -0.28
LDB3-208ENST00000623007 RBFOX3A6NFN3 312 aa13.28□□□□□ -0.28
LDB3-208ENST00000623007 CYB5BO43169 146 aa13.28□□□□□ -0.28
LDB3-208ENST00000623007 C2orf83Q53S99 150 aa13.28□□□□□ -0.28
LDB3-208ENST00000623007 KHDC3LQ587J8 217 aa13.28□□□□□ -0.28
LDB3-208ENST00000623007 OR11H6Q8NGC7 330 aa13.28□□□□□ -0.28
LDB3-208ENST00000623007 NKX6-2Q9C056 277 aaPredicted RBP13.28□□□□□ -0.28
LDB3-208ENST00000623007 RPRMQ9NS64 109 aa13.28□□□□□ -0.28
LDB3-208ENST00000623007 INSIG2Q9Y5U4 225 aa13.28□□□□□ -0.28
LDB3-208ENST00000623007 TRAV3A0A0B4J244 114 aa13.28□□□□□ -0.28
LDB3-208ENST00000623007 ENSAO43768 121 aaKnown RBP13.28□□□□□ -0.28
LDB3-208ENST00000623007 HSPB1P04792 205 aaKnown RBP13.28□□□□□ -0.28
LDB3-208ENST00000623007 SP5Q6BEB4 398 aaPredicted RBP13.28□□□□□ -0.28
LDB3-208ENST00000623007 SPSB3Q6PJ21 355 aa13.28□□□□□ -0.28
LDB3-208ENST00000623007 RBMS3Q6XE24 437 aaKnown RBP13.28□□□□□ -0.28
LDB3-208ENST00000623007 OR10G4Q8NGN3 311 aa13.28□□□□□ -0.28
LDB3-208ENST00000623007 RPEQ96AT9 228 aa13.28□□□□□ -0.28
LDB3-208ENST00000623007 ACTR3CQ9C0K3 210 aaPredicted RBP13.28□□□□□ -0.28
LDB3-208ENST00000623007 DIDO1Q9BTC0 2240 aaKnown RBP13.27□□□□□ -0.28
LDB3-208ENST00000623007 CTXND1A0A1B0GTU2 59 aa13.27□□□□□ -0.29
LDB3-208ENST00000623007 OOSP1A8MZH6 123 aa13.27□□□□□ -0.29
LDB3-208ENST00000623007 PRTN3P24158 256 aa13.27□□□□□ -0.29
LDB3-208ENST00000623007 OPRK1P41145 380 aa13.27□□□□□ -0.29
LDB3-208ENST00000623007 COMPP49747 757 aaPredicted RBP13.27□□□□□ -0.29
LDB3-208ENST00000623007 PPT1P50897 306 aa13.27□□□□□ -0.29
LDB3-208ENST00000623007 AKR1C1Q04828 323 aa13.27□□□□□ -0.29
LDB3-208ENST00000623007 MMD2Q8IY49 270 aa13.27□□□□□ -0.29
LDB3-208ENST00000623007 CACNG8Q8WXS5 425 aa13.27□□□□□ -0.29
LDB3-208ENST00000623007 SLC39A9Q9NUM3 307 aa13.27□□□□□ -0.29
LDB3-208ENST00000623007 ONECUT1Q9UBC0 465 aa13.27□□□□□ -0.29
LDB3-208ENST00000623007 TEX50A0A1B0GTY4 177 aa13.26□□□□□ -0.29
LDB3-208ENST00000623007 FAM157AC9JC47 383 aa13.26□□□□□ -0.29
LDB3-208ENST00000623007 PRSS46E5RG02 174 aa13.26□□□□□ -0.29
LDB3-208ENST00000623007 HTR1DP28221 377 aa13.26□□□□□ -0.29
LDB3-208ENST00000623007 TMEM249Q2WGJ8 235 aa13.26□□□□□ -0.29
LDB3-208ENST00000623007 ZNF506Q5JVG8 444 aa13.26□□□□□ -0.29
LDB3-208ENST00000623007 ZNF787Q6DD87 383 aa13.26□□□□□ -0.29
LDB3-208ENST00000623007 CCDC144NLQ6NUI1 221 aa13.26□□□□□ -0.29
LDB3-208ENST00000623007 P2RX4Q99571 388 aa13.26□□□□□ -0.29
LDB3-208ENST00000623007 SPOCK3Q9BQ16 436 aa13.26□□□□□ -0.29
LDB3-208ENST00000623007 NDUFA4L2Q9NRX3 87 aa13.26□□□□□ -0.29
LDB3-208ENST00000623007 FAM96BQ9Y3D0 163 aa13.26□□□□□ -0.29
LDB3-208ENST00000623007 CHD6Q8TD26 2715 aa13.25□□□□□ -0.29
LDB3-208ENST00000623007 SRRM4A7MD48 611 aaKnown RBP13.25□□□□□ -0.29
LDB3-208ENST00000623007 OVOL3O00110 214 aa13.25□□□□□ -0.29
LDB3-208ENST00000623007 SRSF3P84103 164 aaKnown RBP13.25□□□□□ -0.29
LDB3-208ENST00000623007 BSXQ3C1V8 233 aa13.25□□□□□ -0.29
LDB3-208ENST00000623007 SPINK9Q5DT21 86 aa13.25□□□□□ -0.29
LDB3-208ENST00000623007 TEPPQ6URK8 271 aa13.25□□□□□ -0.29
LDB3-208ENST00000623007 RCC1LQ96I51 464 aaKnown RBP13.25□□□□□ -0.29
LDB3-208ENST00000623007 SCRT1Q9BWW7 348 aa13.25□□□□□ -0.29
LDB3-208ENST00000623007 PKDREJQ9NTG1 2253 aa13.25□□□□□ -0.29
LDB3-208ENST00000623007 DOCK11Q5JSL3 2073 aa13.25□□□□□ -0.29
LDB3-208ENST00000623007 IGHV1-3A0A0C4DH29 117 aa13.24□□□□□ -0.29
LDB3-208ENST00000623007 RRHO14718 337 aa13.24□□□□□ -0.29
LDB3-208ENST00000623007 ADCYAP1P18509 176 aa13.24□□□□□ -0.29
LDB3-208ENST00000623007 GPX4P36969 197 aaPredicted RBP13.24□□□□□ -0.29
LDB3-208ENST00000623007 REG1BP48304 166 aa13.24□□□□□ -0.29
LDB3-208ENST00000623007 FFAR4Q5NUL3 377 aa13.24□□□□□ -0.29
LDB3-208ENST00000623007 OR10G9Q8NGN4 311 aa13.24□□□□□ -0.29
LDB3-208ENST00000623007 OR10G7Q8NGN6 311 aa13.24□□□□□ -0.29
LDB3-208ENST00000623007 RNASEH2CQ8TDP1 164 aaKnown RBP13.24□□□□□ -0.29
LDB3-208ENST00000623007 TMEM231Q9H6L2 316 aa13.24□□□□□ -0.29
LDB3-208ENST00000623007 DPM3Q9P2X0 92 aa13.24□□□□□ -0.29
LDB3-208ENST00000623007 ROS1P08922 2347 aa13.24□□□□□ -0.29
LDB3-208ENST00000623007 MAP1LC3B2A6NCE7 125 aa13.24□□□□□ -0.29
LDB3-208ENST00000623007 ACTL6BO94805 426 aa13.24□□□□□ -0.29
LDB3-208ENST00000623007 CA2P00918 260 aa13.24□□□□□ -0.29
LDB3-208ENST00000623007 OR4P4Q8NGL7 312 aa13.24□□□□□ -0.29
LDB3-208ENST00000623007 CLDND2Q8NHS1 167 aa13.24□□□□□ -0.29
LDB3-208ENST00000623007 SRSF8Q9BRL6 282 aaKnown RBP13.24□□□□□ -0.29
LDB3-208ENST00000623007 HINT2Q9BX68 163 aa13.24□□□□□ -0.29
LDB3-208ENST00000623007 MAP1LC3BQ9GZQ8 125 aa13.24□□□□□ -0.29
LDB3-208ENST00000623007 ZNRD1Q9P1U0 126 aa13.24□□□□□ -0.29
LDB3-208ENST00000623007 C22orf46C9J442 243 aa13.23□□□□□ -0.29
LDB3-208ENST00000623007 LY6LH3BQJ8 138 aa13.23□□□□□ -0.29
LDB3-208ENST00000623007 IGLV2-23P01705 113 aa13.23□□□□□ -0.29
LDB3-208ENST00000623007 SOHLH1Q5JUK2 328 aa13.23□□□□□ -0.29
LDB3-208ENST00000623007 MINOS1Q5TGZ0 78 aa13.23□□□□□ -0.29
LDB3-208ENST00000623007 TREML4Q6UXN2 200 aa13.23□□□□□ -0.29
LDB3-208ENST00000623007 C19orf24Q9BVV8 132 aa13.23□□□□□ -0.29
LDB3-208ENST00000623007 MANBALQ9NQG1 85 aa13.23□□□□□ -0.29
LDB3-208ENST00000623007 MINOS1-NBL1R4GNA1 71 aa13.23□□□□□ -0.29
LDB3-208ENST00000623007 SMCO3A2RU48 225 aa13.22□□□□□ -0.29
LDB3-208ENST00000623007 C19orf84I3L1E1 186 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms