RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 HSPE1P61604 102 aaKnown RBP13.59□□□□□ -0.23
TRAPPC3-210ENST00000617904 RAB11AP62491 216 aa13.59□□□□□ -0.23
TRAPPC3-210ENST00000617904 RELBQ01201 579 aa13.59□□□□□ -0.23
TRAPPC3-210ENST00000617904 ATP6V1FQ16864 119 aa13.59□□□□□ -0.23
TRAPPC3-210ENST00000617904 UTF1Q5T230 341 aa13.59□□□□□ -0.23
TRAPPC3-210ENST00000617904 LILRB2Q8N423 598 aa13.59□□□□□ -0.23
TRAPPC3-210ENST00000617904 OR5B3Q8NH48 314 aa13.59□□□□□ -0.23
TRAPPC3-210ENST00000617904 SPATA3Q8NHX4 192 aa13.59□□□□□ -0.23
TRAPPC3-210ENST00000617904 PINX1Q96BK5 328 aaKnown RBP13.59□□□□□ -0.23
TRAPPC3-210ENST00000617904 SIRPDQ9H106 197 aa13.59□□□□□ -0.23
TRAPPC3-210ENST00000617904 HEYLQ9NQ87 328 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC3-210ENST00000617904 SONP18583 2426 aaKnown RBP13.58□□□□□ -0.24
TRAPPC3-210ENST00000617904 B4DSR2 109 aa13.58□□□□□ -0.24
TRAPPC3-210ENST00000617904 UPK2O00526 184 aa13.58□□□□□ -0.24
TRAPPC3-210ENST00000617904 PDLIM3Q53GG5 364 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC3-210ENST00000617904 SPANXN5Q5MJ07 72 aa13.58□□□□□ -0.24
TRAPPC3-210ENST00000617904 C1orf229Q6ZS94 237 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC3-210ENST00000617904 TEX45Q8NA69 505 aa13.58□□□□□ -0.24
TRAPPC3-210ENST00000617904 UBAC2Q8NBM4 344 aa13.58□□□□□ -0.24
TRAPPC3-210ENST00000617904 QTRT1Q9BXR0 403 aaKnown RBP13.58□□□□□ -0.24
TRAPPC3-210ENST00000617904 SLC25A32Q9H2D1 315 aa13.58□□□□□ -0.24
TRAPPC3-210ENST00000617904 C11orf1Q9H5F2 150 aa13.58□□□□□ -0.24
TRAPPC3-210ENST00000617904 ZNRD1Q9P1U0 126 aa13.58□□□□□ -0.24
TRAPPC3-210ENST00000617904 OR51B2Q9Y5P1 312 aa13.58□□□□□ -0.24
TRAPPC3-210ENST00000617904 ABCA1O95477 2261 aa13.57□□□□□ -0.24
TRAPPC3-210ENST00000617904 TRAV20A0A0B4J274 112 aa13.57□□□□□ -0.24
TRAPPC3-210ENST00000617904 A0A1W2PN81 502 aa13.57□□□□□ -0.24
TRAPPC3-210ENST00000617904 ODF3BA8MYP8 253 aa13.57□□□□□ -0.24
TRAPPC3-210ENST00000617904 TSPAN9O75954 239 aa13.57□□□□□ -0.24
TRAPPC3-210ENST00000617904 OR9G9P0C7N8 305 aa13.57□□□□□ -0.24
TRAPPC3-210ENST00000617904 BRS3P32247 399 aa13.57□□□□□ -0.24
TRAPPC3-210ENST00000617904 MAS1LP35410 378 aa13.57□□□□□ -0.24
TRAPPC3-210ENST00000617904 CHRNA7P36544 502 aa13.57□□□□□ -0.24
TRAPPC3-210ENST00000617904 HTR2BP41595 481 aa13.57□□□□□ -0.24
TRAPPC3-210ENST00000617904 OR2B8PP59922 312 aa13.57□□□□□ -0.24
TRAPPC3-210ENST00000617904 OR10P1Q8NGE3 313 aa13.57□□□□□ -0.24
TRAPPC3-210ENST00000617904 TMEM167AQ8TBQ9 72 aa13.57□□□□□ -0.24
TRAPPC3-210ENST00000617904 SCGB1C1Q8TD33 95 aa13.57□□□□□ -0.24
TRAPPC3-210ENST00000617904 MALSU1Q96EH3 234 aa13.57□□□□□ -0.24
TRAPPC3-210ENST00000617904 GNPNAT1Q96EK6 184 aaPredicted RBP13.57□□□□□ -0.24
TRAPPC3-210ENST00000617904 PLEKHA3Q9HB20 300 aa13.57□□□□□ -0.24
TRAPPC3-210ENST00000617904 TMEM14BQ9NUH8 114 aa13.57□□□□□ -0.24
TRAPPC3-210ENST00000617904 KIAA1456Q9P272 454 aa13.57□□□□□ -0.24
TRAPPC3-210ENST00000617904 FBN1P35555 2871 aaKnown RBP13.56□□□□□ -0.24
TRAPPC3-210ENST00000617904 IGHV4-30-2A0A087WSY4 118 aa13.56□□□□□ -0.24
TRAPPC3-210ENST00000617904 IGHV4-61A0A0C4DH41 118 aa13.56□□□□□ -0.24
TRAPPC3-210ENST00000617904 KCNAB3O43448 404 aa13.56□□□□□ -0.24
TRAPPC3-210ENST00000617904 IFNA10P01566 189 aa13.56□□□□□ -0.24
TRAPPC3-210ENST00000617904 IGKV1-16P04430 117 aa13.56□□□□□ -0.24
TRAPPC3-210ENST00000617904 OR8U8P0C7N1 319 aa13.56□□□□□ -0.24
TRAPPC3-210ENST00000617904 SAA1P0DJI8 122 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC3-210ENST00000617904 RPL8P62917 257 aaKnown RBP13.56□□□□□ -0.24
TRAPPC3-210ENST00000617904 PAX2Q02962 417 aa13.56□□□□□ -0.24
TRAPPC3-210ENST00000617904 CLLU1Q5K131 121 aa13.56□□□□□ -0.24
TRAPPC3-210ENST00000617904 ALKAL2Q6UX46 152 aa13.56□□□□□ -0.24
TRAPPC3-210ENST00000617904 PDZD9Q8IXQ8 264 aa13.56□□□□□ -0.24
TRAPPC3-210ENST00000617904 MMD2Q8IY49 270 aa13.56□□□□□ -0.24
TRAPPC3-210ENST00000617904 VKORC1L1Q8N0U8 176 aa13.56□□□□□ -0.24
TRAPPC3-210ENST00000617904 PUSL1Q8N0Z8 303 aaKnown RBP13.56□□□□□ -0.24
TRAPPC3-210ENST00000617904 OR5C1Q8NGR4 320 aa13.56□□□□□ -0.24
TRAPPC3-210ENST00000617904 OR1L8Q8NGR8 309 aa13.56□□□□□ -0.24
TRAPPC3-210ENST00000617904 RNF141Q8WVD5 230 aa13.56□□□□□ -0.24
TRAPPC3-210ENST00000617904 ATP5SQ99766 215 aa13.56□□□□□ -0.24
TRAPPC3-210ENST00000617904 SMIM3Q9BZL3 60 aa13.56□□□□□ -0.24
TRAPPC3-210ENST00000617904 TCF19Q9Y242 345 aa13.56□□□□□ -0.24
TRAPPC3-210ENST00000617904 IGSF23A1L1A6 192 aa13.55□□□□□ -0.24
TRAPPC3-210ENST00000617904 LY6LH3BQJ8 138 aa13.55□□□□□ -0.24
TRAPPC3-210ENST00000617904 CD5LO43866 347 aa13.55□□□□□ -0.24
TRAPPC3-210ENST00000617904 MSMBP08118 114 aa13.55□□□□□ -0.24
TRAPPC3-210ENST00000617904 PAX9P55771 341 aa13.55□□□□□ -0.24
TRAPPC3-210ENST00000617904 ERHP84090 104 aaKnown RBP13.55□□□□□ -0.24
TRAPPC3-210ENST00000617904 NHLH2Q02577 135 aa13.55□□□□□ -0.24
TRAPPC3-210ENST00000617904 FBN3Q75N90 2809 aa13.55□□□□□ -0.24
TRAPPC3-210ENST00000617904 COL6A5A8TX70 2615 aa13.54□□□□□ -0.24
TRAPPC3-210ENST00000617904 H3BP45 60 aa13.54□□□□□ -0.24
TRAPPC3-210ENST00000617904 CST7O76096 145 aa13.54□□□□□ -0.24
TRAPPC3-210ENST00000617904 SNCAP37840 140 aa13.54□□□□□ -0.24
TRAPPC3-210ENST00000617904 DYNLT3P51808 116 aa13.54□□□□□ -0.24
TRAPPC3-210ENST00000617904 SUB1P53999 127 aaKnown RBP eCLIP13.54□□□□□ -0.249e-8■■□□□ 11.8
TRAPPC3-210ENST00000617904 PLGLAQ15195 96 aa13.54□□□□□ -0.24
TRAPPC3-210ENST00000617904 RPL7L1Q6DKI1 246 aaKnown RBP13.54□□□□□ -0.24
TRAPPC3-210ENST00000617904 STPG2Q8N412 459 aa13.54□□□□□ -0.24
TRAPPC3-210ENST00000617904 OR2T10Q8NGZ9 312 aa13.54□□□□□ -0.24
TRAPPC3-210ENST00000617904 HINT2Q9BX68 163 aa13.54□□□□□ -0.24
TRAPPC3-210ENST00000617904 CYTL1Q9NRR1 136 aa13.54□□□□□ -0.24
TRAPPC3-210ENST00000617904 PFDN2Q9UHV9 154 aa13.54□□□□□ -0.24
TRAPPC3-210ENST00000617904 HILPDAQ9Y5L2 63 aa13.54□□□□□ -0.24
TRAPPC3-210ENST00000617904 AUP1Q9Y679 476 aa13.54□□□□□ -0.24
TRAPPC3-210ENST00000617904 ATRQ13535 2644 aa13.53□□□□□ -0.24
TRAPPC3-210ENST00000617904 A0A096LNT2 108 aa13.53□□□□□ -0.24
TRAPPC3-210ENST00000617904 FAM157AC9JC47 383 aa13.53□□□□□ -0.24
TRAPPC3-210ENST00000617904 RNASEK-C17orf49H0YIS7 233 aa13.53□□□□□ -0.24
TRAPPC3-210ENST00000617904 MOSP00540 346 aa13.53□□□□□ -0.24
TRAPPC3-210ENST00000617904 SEC11BP0C7V7 166 aa13.53□□□□□ -0.24
TRAPPC3-210ENST00000617904 RAB5CP51148 216 aa13.53□□□□□ -0.24
TRAPPC3-210ENST00000617904 PRCDQ00LT1 54 aa13.53□□□□□ -0.24
TRAPPC3-210ENST00000617904 PAX8Q06710 450 aa13.53□□□□□ -0.24
TRAPPC3-210ENST00000617904 TMEM267Q0VDI3 215 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC3-210ENST00000617904 KLRD1Q13241 179 aa13.53□□□□□ -0.24
TRAPPC3-210ENST00000617904 CLINT1Q14677 625 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms