RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 CEACAM4O75871 244 aa17.03■□□□□ 0.32
CTDP1-208ENST00000613122 GPR183P32249 361 aa17.03■□□□□ 0.32
CTDP1-208ENST00000613122 IFI27L2Q9H2X8 130 aa17.03■□□□□ 0.32
CTDP1-208ENST00000613122 SMUG1Q53HV7 270 aa17.03■□□□□ 0.32
CTDP1-208ENST00000613122 OR4A47Q6IF82 309 aa17.03■□□□□ 0.32
CTDP1-208ENST00000613122 SAPCD1Q5SSQ6 148 aa17.03■□□□□ 0.32
CTDP1-208ENST00000613122 LINC00862A6NCI5 91 aa17.02■□□□□ 0.32
CTDP1-208ENST00000613122 TCTAP57738 103 aa17.02■□□□□ 0.32
CTDP1-208ENST00000613122 ATG101Q9BSB4 218 aa17.02■□□□□ 0.32
CTDP1-208ENST00000613122 SGK494Q96LW2 274 aa17.02■□□□□ 0.32
CTDP1-208ENST00000613122 PRSS22Q9GZN4 317 aa17.02■□□□□ 0.32
CTDP1-208ENST00000613122 CLEC19AQ6UXS0 136 aa17.02■□□□□ 0.31
CTDP1-208ENST00000613122 H3BVH4 76 aa17.02■□□□□ 0.31
CTDP1-208ENST00000613122 HLA-DQA1P01909 254 aa17.02■□□□□ 0.31
CTDP1-208ENST00000613122 VN1R17PQ8TDU5 208 aa17.02■□□□□ 0.31
CTDP1-208ENST00000613122 ADIPOQQ15848 244 aa17.01■□□□□ 0.31
CTDP1-208ENST00000613122 LINC00114Q6XXX2 140 aa17.01■□□□□ 0.31
CTDP1-208ENST00000613122 STAG3L2P0CL84 134 aa17.01■□□□□ 0.31
CTDP1-208ENST00000613122 C9JCJ5 164 aa17.01■□□□□ 0.31
CTDP1-208ENST00000613122 DIRC3C9JPN6 131 aa17.01■□□□□ 0.31
CTDP1-208ENST00000613122 M0QZK8 103 aa17.01■□□□□ 0.31
CTDP1-208ENST00000613122 SMIM12Q96EX1 92 aa17■□□□□ 0.31
CTDP1-208ENST00000613122 PET117Q6UWS5 81 aa17■□□□□ 0.31
CTDP1-208ENST00000613122 KIR2DL4Q99706 377 aa17■□□□□ 0.31
CTDP1-208ENST00000613122 AHCTF1Q8WYP5 2266 aa17■□□□□ 0.31
CTDP1-208ENST00000613122 ICAM4Q14773 271 aa17■□□□□ 0.31
CTDP1-208ENST00000613122 TCF24Q7RTU0 167 aa17■□□□□ 0.31
CTDP1-208ENST00000613122 FLVCR1-AS1Q8TAF5 88 aa17■□□□□ 0.31
CTDP1-208ENST00000613122 NEU1Q99519 415 aa17■□□□□ 0.31
CTDP1-208ENST00000613122 PINLYPA6NC86 204 aa16.99■□□□□ 0.31
CTDP1-208ENST00000613122 IL6RP08887 468 aaPredicted RBP16.99■□□□□ 0.31
CTDP1-208ENST00000613122 UNQ6494/PRO21346Q6UXR6 183 aa16.99■□□□□ 0.31
CTDP1-208ENST00000613122 A0A0G2JK05 382 aa16.99■□□□□ 0.31
CTDP1-208ENST00000613122 MBNL2Q5VZF2 373 aaKnown RBP16.99■□□□□ 0.31
CTDP1-208ENST00000613122 C17orf98A8MV24 154 aa16.99■□□□□ 0.31
CTDP1-208ENST00000613122 IGHV3-11P01762 117 aa16.99■□□□□ 0.31
CTDP1-208ENST00000613122 MDKP21741 143 aaPredicted RBP16.99■□□□□ 0.31
CTDP1-208ENST00000613122 GCHFRP30047 84 aa16.99■□□□□ 0.31
CTDP1-208ENST00000613122 DUX3Q96PT4 197 aa16.99■□□□□ 0.31
CTDP1-208ENST00000613122 ASXL3Q9C0F0 2248 aa16.99■□□□□ 0.31
CTDP1-208ENST00000613122 IGLV3-32A0A0A0MS00 114 aa16.99■□□□□ 0.31
CTDP1-208ENST00000613122 CCL3L1P16619 93 aa16.99■□□□□ 0.31
CTDP1-208ENST00000613122 PQLC2LA1A4F0 135 aa16.99■□□□□ 0.31
CTDP1-208ENST00000613122 RRHO14718 337 aa16.99■□□□□ 0.31
CTDP1-208ENST00000613122 DSCR9P59020 149 aa16.99■□□□□ 0.31
CTDP1-208ENST00000613122 ZNF250P15622 560 aa16.98■□□□□ 0.31
CTDP1-208ENST00000613122 ARID2Q68CP9 1835 aa16.98■□□□□ 0.31
CTDP1-208ENST00000613122 RP1P56715 2156 aa16.98■□□□□ 0.31
CTDP1-208ENST00000613122 NBR2O15453 112 aa16.98■□□□□ 0.31
CTDP1-208ENST00000613122 KLK2P20151 261 aa16.98■□□□□ 0.31
CTDP1-208ENST00000613122 SH3BGRL3Q9H299 93 aa16.98■□□□□ 0.31
CTDP1-208ENST00000613122 IGHV1-18A0A0C4DH31 117 aa16.98■□□□□ 0.31
CTDP1-208ENST00000613122 PROB1E7EW31 1015 aa16.98■□□□□ 0.31
CTDP1-208ENST00000613122 PSME4Q14997 1843 aa16.98■□□□□ 0.31
CTDP1-208ENST00000613122 ICE1Q9Y2F5 2266 aa16.98■□□□□ 0.31
CTDP1-208ENST00000613122 EIF3GO75821 320 aaKnown RBP eCLIP16.98■□□□□ 0.31
CTDP1-208ENST00000613122 F12P00748 615 aaPredicted RBP16.98■□□□□ 0.31
CTDP1-208ENST00000613122 IFITM3Q01628 133 aa16.98■□□□□ 0.31
CTDP1-208ENST00000613122 TEX45Q8NA69 505 aa16.98■□□□□ 0.31
CTDP1-208ENST00000613122 IFT22Q9H7X7 185 aa16.97■□□□□ 0.31
CTDP1-208ENST00000613122 GEMIN7Q9H840 131 aaKnown RBP16.97■□□□□ 0.31
CTDP1-208ENST00000613122 TET1Q8NFU7 2136 aa16.97■□□□□ 0.31
CTDP1-208ENST00000613122 PATJQ8NI35 1801 aa16.97■□□□□ 0.31
CTDP1-208ENST00000613122 TMEM238LA0A1B0GVL6 79 aa16.97■□□□□ 0.31
CTDP1-208ENST00000613122 A6NJY4 79 aa16.97■□□□□ 0.31
CTDP1-208ENST00000613122 LGALS3P17931 250 aaKnown RBP16.97■□□□□ 0.31
CTDP1-208ENST00000613122 RPL24P83731 157 aaKnown RBP16.97■□□□□ 0.31
CTDP1-208ENST00000613122 TRAF4Q9BUZ4 470 aaPredicted RBP16.97■□□□□ 0.31
CTDP1-208ENST00000613122 PAM16Q9Y3D7 125 aa16.97■□□□□ 0.31
CTDP1-208ENST00000613122 WBP1Q96G27 269 aa16.97■□□□□ 0.31
CTDP1-208ENST00000613122 LYNX1G3V0Z9 82 aa16.96■□□□□ 0.31
CTDP1-208ENST00000613122 H7C1H1 209 aa16.96■□□□□ 0.31
CTDP1-208ENST00000613122 LYNX1P0DP58 116 aa16.96■□□□□ 0.31
CTDP1-208ENST00000613122 GGACTQ9BVM4 153 aa16.96■□□□□ 0.31
CTDP1-208ENST00000613122 ZMAT5Q9UDW3 170 aaKnown RBP16.96■□□□□ 0.31
CTDP1-208ENST00000613122 CKAP5Q14008 2032 aa16.96■□□□□ 0.31
CTDP1-208ENST00000613122 TIMP3P35625 211 aa16.96■□□□□ 0.31
CTDP1-208ENST00000613122 CIRBPQ14011 172 aaKnown RBP16.96■□□□□ 0.31
CTDP1-208ENST00000613122 WNT10AQ9GZT5 417 aa16.96■□□□□ 0.31
CTDP1-208ENST00000613122 CCDC88CQ9P219 2028 aa16.96■□□□□ 0.31
CTDP1-208ENST00000613122 TRAV20A0A0B4J274 112 aa16.96■□□□□ 0.31
CTDP1-208ENST00000613122 MSGN1A6NI15 193 aa16.96■□□□□ 0.31
CTDP1-208ENST00000613122 ASIPP42127 132 aa16.96■□□□□ 0.31
CTDP1-208ENST00000613122 ZNF660Q6AZW8 331 aaPredicted RBP16.96■□□□□ 0.31
CTDP1-208ENST00000613122 TMEM133Q9H2Q1 129 aa16.96■□□□□ 0.31
CTDP1-208ENST00000613122 MTCL1Q9Y4B5 1905 aaKnown RBP16.96■□□□□ 0.31
CTDP1-208ENST00000613122 COX6CP09669 75 aa16.96■□□□□ 0.3
CTDP1-208ENST00000613122 MEIG1Q5JSS6 88 aa16.96■□□□□ 0.3
CTDP1-208ENST00000613122 PAPPA-AS1Q5QFB9 102 aa16.96■□□□□ 0.3
CTDP1-208ENST00000613122 ZCCHC24Q8N2G6 241 aaKnown RBP16.96■□□□□ 0.3
CTDP1-208ENST00000613122 HIST1H2BAQ96A08 127 aa16.96■□□□□ 0.3
CTDP1-208ENST00000613122 TMEM101Q96IK0 257 aa16.96■□□□□ 0.3
CTDP1-208ENST00000613122 KLK15Q9H2R5 256 aa16.96■□□□□ 0.3
CTDP1-208ENST00000613122 GREB1LQ9C091 1923 aaPredicted RBP16.96■□□□□ 0.3
CTDP1-208ENST00000613122 PPP1R17O96001 155 aa16.95■□□□□ 0.3
CTDP1-208ENST00000613122 MYOD1P15172 320 aa16.95■□□□□ 0.3
CTDP1-208ENST00000613122 RND3P61587 244 aa16.95■□□□□ 0.3
CTDP1-208ENST00000613122 COPS9Q8WXC6 57 aa16.95■□□□□ 0.3
CTDP1-208ENST00000613122 MRPL18Q9H0U6 180 aaKnown RBP16.95■□□□□ 0.3
CTDP1-208ENST00000613122 GNLYP22749 145 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms