RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 IZUMO1RA6ND01 250 aa13.16□□□□□ -0.3
PRKN-209ENST00000612485 NDUFB8O95169 186 aa13.16□□□□□ -0.3
PRKN-209ENST00000612485 MYOD1P15172 320 aa13.16□□□□□ -0.3
PRKN-209ENST00000612485 TAS2R46P59540 309 aa13.16□□□□□ -0.3
PRKN-209ENST00000612485 DHRS11Q6UWP2 260 aa13.16□□□□□ -0.3
PRKN-209ENST00000612485 LAX1Q8IWV1 398 aa13.16□□□□□ -0.3
PRKN-209ENST00000612485 DMBX1Q8NFW5 382 aa13.16□□□□□ -0.3
PRKN-209ENST00000612485 COMMD5Q9GZQ3 224 aa13.16□□□□□ -0.3
PRKN-209ENST00000612485 COMMD9Q9P000 198 aa13.16□□□□□ -0.3
PRKN-209ENST00000612485 ANAPC10Q9UM13 185 aa13.16□□□□□ -0.3
PRKN-209ENST00000612485 DMRT1Q9Y5R6 373 aa13.16□□□□□ -0.3
PRKN-209ENST00000612485 LGALS9O00182 355 aa13.15□□□□□ -0.3
PRKN-209ENST00000612485 UPK2O00526 184 aa13.15□□□□□ -0.3
PRKN-209ENST00000612485 OR2C1O95371 312 aa13.15□□□□□ -0.3
PRKN-209ENST00000612485 IGHV3-23P01764 117 aa13.15□□□□□ -0.3
PRKN-209ENST00000612485 REG1AP05451 166 aa13.15□□□□□ -0.3
PRKN-209ENST00000612485 FGF2P09038 288 aa13.15□□□□□ -0.3
PRKN-209ENST00000612485 GNRHRP30968 328 aa13.15□□□□□ -0.3
PRKN-209ENST00000612485 ARL3P36405 182 aa13.15□□□□□ -0.3
PRKN-209ENST00000612485 OR2B8PP59922 312 aa13.15□□□□□ -0.3
PRKN-209ENST00000612485 NCS1P62166 190 aa13.15□□□□□ -0.3
PRKN-209ENST00000612485 CD300EQ496F6 205 aaPredicted RBP13.15□□□□□ -0.3
PRKN-209ENST00000612485 CLEC19AQ6UXS0 136 aa13.15□□□□□ -0.3
PRKN-209ENST00000612485 GPHB5Q86YW7 130 aa13.15□□□□□ -0.3
PRKN-209ENST00000612485 OR5H2Q8NGV7 314 aa13.15□□□□□ -0.3
PRKN-209ENST00000612485 MOB3AQ96BX8 217 aa13.15□□□□□ -0.3
PRKN-209ENST00000612485 CXorf58Q96LI9 332 aa13.15□□□□□ -0.3
PRKN-209ENST00000612485 CITED4Q96RK1 184 aa13.15□□□□□ -0.3
PRKN-209ENST00000612485 SPATA25Q9BR10 227 aa13.15□□□□□ -0.3
PRKN-209ENST00000612485 SRSF8Q9BRL6 282 aaKnown RBP13.15□□□□□ -0.3
PRKN-209ENST00000612485 ZNF2Q9BSG1 426 aaPredicted RBP13.15□□□□□ -0.3
PRKN-209ENST00000612485 TMEM140Q9NV12 185 aa13.15□□□□□ -0.3
PRKN-209ENST00000612485 IGLV11-55A0A075B6I3 123 aa13.14□□□□□ -0.31
PRKN-209ENST00000612485 C2orf70A6NJV1 201 aa13.14□□□□□ -0.31
PRKN-209ENST00000612485 CGB1A6NKQ9 187 aa13.14□□□□□ -0.31
PRKN-209ENST00000612485 S1PR2O95136 353 aa13.14□□□□□ -0.31
PRKN-209ENST00000612485 HLA-AP01891 365 aaKnown RBP13.14□□□□□ -0.31
PRKN-209ENST00000612485 PMP2P02689 132 aa13.14□□□□□ -0.31
PRKN-209ENST00000612485 FOLR2P14207 255 aa13.14□□□□□ -0.31
PRKN-209ENST00000612485 NAT1P18440 290 aa13.14□□□□□ -0.31
PRKN-209ENST00000612485 PRSS3P35030 304 aa13.14□□□□□ -0.31
PRKN-209ENST00000612485 RFX2P48378 723 aa13.14□□□□□ -0.31
PRKN-209ENST00000612485 ERVK-16P61578 105 aa13.14□□□□□ -0.31
PRKN-209ENST00000612485 FAM106AQ4KMX7 169 aa13.14□□□□□ -0.31
PRKN-209ENST00000612485 THOC7Q6I9Y2 204 aaKnown RBP13.14□□□□□ -0.31
PRKN-209ENST00000612485 ADAMTSL5Q6ZMM2 481 aa13.14□□□□□ -0.31
PRKN-209ENST00000612485 SLC25A46Q96AG3 418 aa13.14□□□□□ -0.31
PRKN-209ENST00000612485 CCDC140Q96MF4 163 aa13.14□□□□□ -0.31
PRKN-209ENST00000612485 NAA50Q9GZZ1 169 aaKnown RBP13.14□□□□□ -0.31
PRKN-209ENST00000612485 SLC2A8Q9NY64 477 aa13.14□□□□□ -0.31
PRKN-209ENST00000612485 TECRQ9NZ01 308 aaKnown RBP13.14□□□□□ -0.31
PRKN-209ENST00000612485 TRBV7-1A0A0A6YYK4 115 aa13.13□□□□□ -0.31
PRKN-209ENST00000612485 TRAV3A0A0B4J244 114 aa13.13□□□□□ -0.31
PRKN-209ENST00000612485 CYB5BO43169 146 aa13.13□□□□□ -0.31
PRKN-209ENST00000612485 CD81P60033 236 aa13.13□□□□□ -0.31
PRKN-209ENST00000612485 VBP1P61758 197 aa13.13□□□□□ -0.31
PRKN-209ENST00000612485 HAGHQ16775 308 aa13.13□□□□□ -0.31
PRKN-209ENST00000612485 DEFB114Q30KQ6 69 aa13.13□□□□□ -0.31
PRKN-209ENST00000612485 CASC10Q5T4H9 136 aa13.13□□□□□ -0.31
PRKN-209ENST00000612485 CMTM1Q8IZ96 169 aa13.13□□□□□ -0.31
PRKN-209ENST00000612485 QTRT1Q9BXR0 403 aaKnown RBP13.13□□□□□ -0.31
PRKN-209ENST00000612485 THYN1Q9P016 225 aa13.13□□□□□ -0.31
PRKN-209ENST00000612485 S4R3C0 116 aa13.13□□□□□ -0.31
PRKN-209ENST00000612485 SMIM31A0A1B0GVY4 71 aa13.12□□□□□ -0.31
PRKN-209ENST00000612485 IGLC7A0M8Q6 106 aa13.12□□□□□ -0.31
PRKN-209ENST00000612485 PGLYRP1O75594 196 aaPredicted RBP13.12□□□□□ -0.31
PRKN-209ENST00000612485 TPPPO94811 219 aa13.12□□□□□ -0.31
PRKN-209ENST00000612485 RLN1P04808 185 aa13.12□□□□□ -0.31
PRKN-209ENST00000612485 LYL1P12980 280 aa13.12□□□□□ -0.31
PRKN-209ENST00000612485 F2RP25116 425 aa13.12□□□□□ -0.31
PRKN-209ENST00000612485 ALDH3B2P48448 385 aa13.12□□□□□ -0.31
PRKN-209ENST00000612485 GPR107Q5VW38 600 aa13.12□□□□□ -0.31
PRKN-209ENST00000612485 HSD17B13Q7Z5P4 300 aaPredicted RBP13.12□□□□□ -0.31
PRKN-209ENST00000612485 OR6F1Q8NGZ6 308 aa13.12□□□□□ -0.31
PRKN-209ENST00000612485 CMTM3Q96MX0 182 aa13.12□□□□□ -0.31
PRKN-209ENST00000612485 NEURL2Q9BR09 285 aa13.12□□□□□ -0.31
PRKN-209ENST00000612485 PALMDQ9NP74 551 aa13.12□□□□□ -0.31
PRKN-209ENST00000612485 ZNF320A2RRD8 509 aa13.11□□□□□ -0.31
PRKN-209ENST00000612485 MFSD2BA6NFX1 497 aa13.11□□□□□ -0.31
PRKN-209ENST00000612485 MARCH11A6NNE9 402 aa13.11□□□□□ -0.31
PRKN-209ENST00000612485 ZNF785A8K8V0 405 aa13.11□□□□□ -0.31
PRKN-209ENST00000612485 GPR31O00270 319 aa13.11□□□□□ -0.31
PRKN-209ENST00000612485 APOA1P02647 267 aa13.11□□□□□ -0.31
PRKN-209ENST00000612485 IFNA6P05013 189 aa13.11□□□□□ -0.31
PRKN-209ENST00000612485 CLEC3BP05452 202 aa13.11□□□□□ -0.31
PRKN-209ENST00000612485 RPA2P15927 270 aa13.11□□□□□ -0.31
PRKN-209ENST00000612485 GUCA2BQ16661 112 aa13.11□□□□□ -0.31
PRKN-209ENST00000612485 GPR141Q7Z602 305 aa13.11□□□□□ -0.31
PRKN-209ENST00000612485 ISOC1Q96CN7 298 aa13.11□□□□□ -0.31
PRKN-209ENST00000612485 DGCR14Q96DF8 476 aaKnown RBP13.11□□□□□ -0.31
PRKN-209ENST00000612485 FXYD6Q9H0Q3 95 aa13.11□□□□□ -0.31
PRKN-209ENST00000612485 PLEKHA3Q9HB20 300 aa13.11□□□□□ -0.31
PRKN-209ENST00000612485 ZC4H2Q9NQZ6 224 aa13.11□□□□□ -0.31
PRKN-209ENST00000612485 COMMD3Q9UBI1 195 aa13.11□□□□□ -0.31
PRKN-209ENST00000612485 A8MWP6 167 aa13.1□□□□□ -0.31
PRKN-209ENST00000612485 EIF4EP06730 217 aaKnown RBP13.1□□□□□ -0.31
PRKN-209ENST00000612485 TRAPPC2P0DI81 140 aa13.1□□□□□ -0.31
PRKN-209ENST00000612485 TRAPPC2BP0DI82 140 aa13.1□□□□□ -0.31
PRKN-209ENST00000612485 CBLN1P23435 193 aa13.1□□□□□ -0.31
PRKN-209ENST00000612485 HLA-DMAP28067 261 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms