RNA–Protein interactions for RNA: ENST00000610359.4

MUC1-221, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-221ENST00000610359 RAB27BO00194 218 aa4.78□□□□□ -1.64
MUC1-221ENST00000610359 NUPL2O15504 423 aaKnown RBP4.78□□□□□ -1.64
MUC1-221ENST00000610359 FKBP6O75344 327 aa4.78□□□□□ -1.64
MUC1-221ENST00000610359 KBTBD11O94819 623 aa4.78□□□□□ -1.64
MUC1-221ENST00000610359 APOHP02749 345 aaPredicted RBP4.78□□□□□ -1.64
MUC1-221ENST00000610359 GBX2P52951 348 aaPredicted RBP4.78□□□□□ -1.64
MUC1-221ENST00000610359 TPBGQ13641 420 aa4.78□□□□□ -1.64
MUC1-221ENST00000610359 OR2G6Q5TZ20 316 aa4.78□□□□□ -1.64
MUC1-221ENST00000610359 FAM222AQ5U5X8 452 aa4.78□□□□□ -1.64
MUC1-221ENST00000610359 Q6ZRN7 208 aaPredicted RBP4.78□□□□□ -1.64
MUC1-221ENST00000610359 MFSD4AQ8N468 514 aa4.78□□□□□ -1.64
MUC1-221ENST00000610359 C15orf53Q8NAA6 179 aa4.78□□□□□ -1.64
MUC1-221ENST00000610359 TMEM167AQ8TBQ9 72 aa4.78□□□□□ -1.64
MUC1-221ENST00000610359 VN1R17PQ8TDU5 208 aa4.78□□□□□ -1.64
MUC1-221ENST00000610359 OR10C1Q96KK4 312 aa4.78□□□□□ -1.64
MUC1-221ENST00000610359 KRTAP9-2Q9BYQ4 174 aa4.78□□□□□ -1.64
MUC1-221ENST00000610359 KCNK15Q9H427 330 aa4.78□□□□□ -1.64
MUC1-221ENST00000610359 IMPAD1Q9NX62 359 aa4.78□□□□□ -1.64
MUC1-221ENST00000610359 ERVK13-1Q9NX77 482 aa4.78□□□□□ -1.64
MUC1-221ENST00000610359 TNXBP22105 4242 aa4.78□□□□□ -1.64
MUC1-221ENST00000610359 A0A1W2PPK0 400 aa4.77□□□□□ -1.65
MUC1-221ENST00000610359 IGLC7A0M8Q6 106 aa4.77□□□□□ -1.65
MUC1-221ENST00000610359 DNASE2O00115 360 aaPredicted RBP4.77□□□□□ -1.65
MUC1-221ENST00000610359 FCGR3BO75015 233 aa4.77□□□□□ -1.65
MUC1-221ENST00000610359 CTSGP08311 255 aa4.77□□□□□ -1.65
MUC1-221ENST00000610359 RPS11P62280 158 aaKnown RBP eCLIP4.77□□□□□ -1.65
MUC1-221ENST00000610359 PAFAH1B2P68402 229 aa4.77□□□□□ -1.65
MUC1-221ENST00000610359 MRPL28Q13084 256 aaKnown RBP4.77□□□□□ -1.65
MUC1-221ENST00000610359 PLA2G7Q13093 441 aa4.77□□□□□ -1.65
MUC1-221ENST00000610359 ARFRP1Q13795 201 aa4.77□□□□□ -1.65
MUC1-221ENST00000610359 OXA1LQ15070 435 aa4.77□□□□□ -1.65
MUC1-221ENST00000610359 IGSF11Q5DX21 431 aa4.77□□□□□ -1.65
MUC1-221ENST00000610359 ACTL10Q5JWF8 245 aa4.77□□□□□ -1.65
MUC1-221ENST00000610359 UBE2UQ5VVX9 321 aa4.77□□□□□ -1.65
MUC1-221ENST00000610359 CDPF1Q6NVV7 123 aa4.77□□□□□ -1.65
MUC1-221ENST00000610359 SPSB3Q6PJ21 355 aa4.77□□□□□ -1.65
MUC1-221ENST00000610359 ZNF705AQ6ZN79 300 aaPredicted RBP4.77□□□□□ -1.65
MUC1-221ENST00000610359 ST8SIA2Q92186 375 aa4.77□□□□□ -1.65
MUC1-221ENST00000610359 CCDC124Q96CT7 223 aaKnown RBP4.77□□□□□ -1.65
MUC1-221ENST00000610359 DGCR14Q96DF8 476 aaKnown RBP4.77□□□□□ -1.65
MUC1-221ENST00000610359 ADTRPQ96IZ2 230 aa4.77□□□□□ -1.65
MUC1-221ENST00000610359 CMTM3Q96MX0 182 aa4.77□□□□□ -1.65
MUC1-221ENST00000610359 NEU1Q99519 415 aa4.77□□□□□ -1.65
MUC1-221ENST00000610359 CIB1Q99828 191 aa4.77□□□□□ -1.65
MUC1-221ENST00000610359 Q9H8V8 135 aa4.77□□□□□ -1.65
MUC1-221ENST00000610359 PTTG2Q9NZH5 202 aa4.77□□□□□ -1.65
MUC1-221ENST00000610359 XCL2Q9UBD3 114 aa4.77□□□□□ -1.65
MUC1-221ENST00000610359 TRAV14DV4A0A0A6YYC5 116 aa4.76□□□□□ -1.65
MUC1-221ENST00000610359 TRAV2A0A0B4J234 112 aa4.76□□□□□ -1.65
MUC1-221ENST00000610359 IGHV3-66A0A0C4DH42 116 aa4.76□□□□□ -1.65
MUC1-221ENST00000610359 TMEM238LA0A1B0GVL6 79 aa4.76□□□□□ -1.65
MUC1-221ENST00000610359 AQP12BA6NM10 295 aa4.76□□□□□ -1.65
MUC1-221ENST00000610359 ZNF705FA8MVS1 300 aaPredicted RBP4.76□□□□□ -1.65
MUC1-221ENST00000610359 TRDCB7Z8K6 153 aa4.76□□□□□ -1.65
MUC1-221ENST00000610359 K7EQG2 157 aa4.76□□□□□ -1.65
MUC1-221ENST00000610359 SOCS1O15524 211 aa4.76□□□□□ -1.65
MUC1-221ENST00000610359 ZNF705DP0CH99 300 aaPredicted RBP4.76□□□□□ -1.65
MUC1-221ENST00000610359 ZNF705BP0CI00 300 aaPredicted RBP4.76□□□□□ -1.65
MUC1-221ENST00000610359 SRMP19623 302 aa4.76□□□□□ -1.65
MUC1-221ENST00000610359 CELP19835 753 aa4.76□□□□□ -1.65
MUC1-221ENST00000610359 GYS2P54840 703 aa4.76□□□□□ -1.65
MUC1-221ENST00000610359 BRWD1-AS2P59051 145 aa4.76□□□□□ -1.65
MUC1-221ENST00000610359 OR2B8PP59922 312 aa4.76□□□□□ -1.65
MUC1-221ENST00000610359 RPL30P62888 115 aaKnown RBP4.76□□□□□ -1.65
MUC1-221ENST00000610359 UNC119Q13432 240 aa4.76□□□□□ -1.65
MUC1-221ENST00000610359 OR2B11Q5JQS5 317 aa4.76□□□□□ -1.65
MUC1-221ENST00000610359 RPL22L1Q6P5R6 122 aaKnown RBP4.76□□□□□ -1.65
MUC1-221ENST00000610359 AQP12AQ8IXF9 295 aa4.76□□□□□ -1.65
MUC1-221ENST00000610359 CDH26Q8IXH8 852 aa4.76□□□□□ -1.65
MUC1-221ENST00000610359 ARHGAP24Q8N264 748 aa4.76□□□□□ -1.65
MUC1-221ENST00000610359 SCARB1Q8WTV0 552 aa4.76□□□□□ -1.65
MUC1-221ENST00000610359 DCUN1D5Q9BTE7 237 aa4.76□□□□□ -1.65
MUC1-221ENST00000610359 TM2D1Q9BX74 207 aa4.76□□□□□ -1.65
MUC1-221ENST00000610359 GABARAPL3Q9BY60 117 aa4.76□□□□□ -1.65
MUC1-221ENST00000610359 GABARAPL1Q9H0R8 117 aa4.76□□□□□ -1.65
MUC1-221ENST00000610359 Q9H3A6 140 aa4.76□□□□□ -1.65
MUC1-221ENST00000610359 RIMS4Q9H426 269 aaPredicted RBP4.76□□□□□ -1.65
MUC1-221ENST00000610359 VSIRQ9H7M9 311 aa4.76□□□□□ -1.65
MUC1-221ENST00000610359 PLEKHJ1Q9NW61 149 aa4.76□□□□□ -1.65
MUC1-221ENST00000610359 C21orf62Q9NYP8 219 aa4.76□□□□□ -1.65
MUC1-221ENST00000610359 TRBV6-7A0A0A0MS04 114 aa4.75□□□□□ -1.65
MUC1-221ENST00000610359 KRTAP9-6A0A140TA67 174 aa4.75□□□□□ -1.65
MUC1-221ENST00000610359 RPS10-NUDT3A0A1W2PQS6 291 aa4.75□□□□□ -1.65
MUC1-221ENST00000610359 TMEM189A5PLL7 270 aa4.75□□□□□ -1.65
MUC1-221ENST00000610359 FOXI3A8MTJ6 420 aaPredicted RBP4.75□□□□□ -1.65
MUC1-221ENST00000610359 BET1O15155 118 aa4.75□□□□□ -1.65
MUC1-221ENST00000610359 OGG1O15527 345 aa4.75□□□□□ -1.65
MUC1-221ENST00000610359 ST8SIA3O43173 380 aa4.75□□□□□ -1.65
MUC1-221ENST00000610359 NUDT3O95989 172 aa4.75□□□□□ -1.65
MUC1-221ENST00000610359 LALBAP00709 142 aa4.75□□□□□ -1.65
MUC1-221ENST00000610359 ZNF688P0C7X2 276 aa4.75□□□□□ -1.65
MUC1-221ENST00000610359 LIMS3P0CW19 117 aa4.75□□□□□ -1.65
MUC1-221ENST00000610359 LIMS4P0CW20 117 aa4.75□□□□□ -1.65
MUC1-221ENST00000610359 HLA-GP17693 338 aa4.75□□□□□ -1.65
MUC1-221ENST00000610359 CRHBPP24387 322 aa4.75□□□□□ -1.65
MUC1-221ENST00000610359 RPL8P62917 257 aaKnown RBP4.75□□□□□ -1.65
MUC1-221ENST00000610359 QRFPP83859 136 aa4.75□□□□□ -1.65
MUC1-221ENST00000610359 UBAC2Q8NBM4 344 aa4.75□□□□□ -1.65
MUC1-221ENST00000610359 DUSP18Q8NEJ0 188 aa4.75□□□□□ -1.65
MUC1-221ENST00000610359 OR10W1Q8NGF6 305 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms