RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 RNF141Q8WVD5 230 aa9.9□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 SRSF8Q9BRL6 282 aaKnown RBP9.9□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 ENY2Q9NPA8 101 aa9.9□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 AUP1Q9Y679 476 aa9.9□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 PRRC2AP48634 2157 aaKnown RBP9.9□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 PMS2P5A8MQ11 134 aa9.89□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 TIMM23O14925 209 aa9.89□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 FGF16O43320 207 aa9.89□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 TSPAN9O75954 239 aa9.89□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 NXPH3O95157 252 aa9.89□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 NDUFA3O95167 84 aa9.89□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 VENTXO95231 258 aa9.89□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 HOXA1P49639 335 aaPredicted RBP9.89□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 DYNLT3P51808 116 aa9.89□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 BPIFB3P59826 476 aa9.89□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 KLRD1Q13241 179 aa9.89□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 BSXQ3C1V8 233 aa9.89□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 SPANXN5Q5MJ07 72 aa9.89□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 NPBQ8NG41 125 aa9.89□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 OR10P1Q8NGE3 313 aa9.89□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 OR2T10Q8NGZ9 312 aa9.89□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 SAT2Q96F10 170 aaPredicted RBP9.89□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 COMMD5Q9GZQ3 224 aa9.89□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 PLEKHA3Q9HB20 300 aa9.89□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 NDUFA4L2Q9NRX3 87 aa9.89□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 SPG11Q96JI7 2443 aa9.89□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 TRAV3A0A0B4J244 114 aa9.88□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 C15orf62A8K5M9 175 aa9.88□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 UMAD1C9J7I0 102 aa9.88□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 CST7O76096 145 aa9.88□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 MOSP00540 346 aa9.88□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 IFNA5P01569 189 aa9.88□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 NMBP08949 121 aa9.88□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 COMPP49747 757 aaPredicted RBP9.88□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 SULT1A2P50226 295 aa9.88□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 F2RL1P55085 397 aa9.88□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 RAB11AP62491 216 aa9.88□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 PSG5Q15238 335 aa9.88□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 LDLRAD2Q5SZI1 272 aa9.88□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 PDZD9Q8IXQ8 264 aa9.88□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 LINC01356Q8N9X3 169 aa9.88□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 ZDHHC16Q969W1 377 aa9.88□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 OR4C12Q96R67 309 aa9.88□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 PSMG3Q9BT73 122 aaPredicted RBP9.88□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 TMEM147Q9BVK8 224 aa9.88□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 WFDC1Q9HC57 220 aa9.88□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 HEYLQ9NQ87 328 aaPredicted RBP9.88□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 SIGLEC9Q9Y336 463 aa9.88□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 TEX50A0A1B0GTY4 177 aa9.87□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 NUDT19A8MXV4 375 aa9.87□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 H3BP45 60 aa9.87□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 TRIM77I1YAP6 450 aa9.87□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 NPFFO15130 113 aa9.87□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 MPDU1O75352 247 aa9.87□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 METTL15P1P0C7V9 234 aa9.87□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 BRS3P32247 399 aa9.87□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 DLX1P56177 255 aa9.87□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 DLK1P80370 383 aa9.87□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 SLC38A11Q08AI6 406 aa9.87□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 TMEM267Q0VDI3 215 aaPredicted RBP9.87□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 PRSS8Q16651 343 aa9.87□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 C2orf83Q53S99 150 aa9.87□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 DPPA3Q6W0C5 159 aa9.87□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 HAPLN4Q86UW8 402 aa9.87□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 PPP1R27Q86WC6 154 aa9.87□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 LILRB2Q8N423 598 aa9.87□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 Q8N6K4 173 aa9.87□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 ZNF114Q8NC26 417 aa9.87□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 SLC24A4Q8NFF2 622 aa9.87□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 NRGNQ92686 78 aa9.87□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 SMIM3Q9BZL3 60 aa9.87□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 ZNF430Q9H8G1 570 aaPredicted RBP9.87□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 TIMM9Q9Y5J7 89 aa9.87□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 IGHV1-69DA0A0B4J2H0 117 aa9.86□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 CENPVL3A0A0U1RRI6 287 aa9.86□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 PRSS46E5RG02 174 aa9.86□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 RRHO14718 337 aa9.86□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 NBR2O15453 112 aa9.86□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 SLC25A17O43808 307 aa9.86□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 IFNA10P01566 189 aa9.86□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 IGHV1-69P01742 117 aa9.86□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 NPY1RP25929 384 aa9.86□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 COL8A1P27658 744 aa9.86□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 KRTAP10-9P60411 292 aa9.86□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 ERHP84090 104 aaKnown RBP9.86□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 SERF2P84101 59 aa9.86□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 PTPN13Q12923 2485 aa9.86□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 CLINT1Q14677 625 aa9.86□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 MRGPRG-AS1Q2M3A8 158 aa9.86□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 LRRC75BQ2VPJ9 315 aa9.86□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 LHFPL4Q7Z7J7 247 aa9.86□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 CENPVQ7Z7K6 275 aaPredicted RBP9.86□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 TMEM217Q8N7C4 229 aa9.86□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 TMED6Q8WW62 240 aa9.86□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 BSCL2Q96G97 398 aaPredicted RBP9.86□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 AJUBAQ96IF1 538 aa9.86□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 C1RLQ9NZP8 487 aa9.86□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 KIAA1456Q9P272 454 aa9.86□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 ACTL6BO94805 426 aa9.85□□□□□ -0.83
NEDD8-MDP1-203ENST00000604306 SNRNP70P08621 437 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms