RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 ODF3BA8MYP8 253 aa16.22■□□□□ 0.19
PNKP-214ENST00000600573 TSPAN15O95858 294 aa16.22■□□□□ 0.19
PNKP-214ENST00000600573 RPS16P62249 146 aaKnown RBP16.22■□□□□ 0.19
PNKP-214ENST00000600573 LCN2P80188 198 aa16.22■□□□□ 0.19
PNKP-214ENST00000600573 LRRC75BQ2VPJ9 315 aa16.22■□□□□ 0.19
PNKP-214ENST00000600573 DPPA3Q6W0C5 159 aa16.22■□□□□ 0.19
PNKP-214ENST00000600573 OR10P1Q8NGE3 313 aa16.22■□□□□ 0.19
PNKP-214ENST00000600573 PSMG3Q9BT73 122 aaPredicted RBP16.22■□□□□ 0.19
PNKP-214ENST00000600573 MS4A7Q9GZW8 240 aaPredicted RBP16.22■□□□□ 0.19
PNKP-214ENST00000600573 SIRPDQ9H106 197 aa16.22■□□□□ 0.19
PNKP-214ENST00000600573 MYO18BQ8IUG5 2567 aa16.22■□□□□ 0.19
PNKP-214ENST00000600573 KBTBD11O94819 623 aa16.21■□□□□ 0.19
PNKP-214ENST00000600573 USF1P22415 310 aaPredicted RBP16.21■□□□□ 0.19
PNKP-214ENST00000600573 HOXA1P49639 335 aaPredicted RBP16.21■□□□□ 0.19
PNKP-214ENST00000600573 ATP5IP56385 69 aaPredicted RBP16.21■□□□□ 0.19
PNKP-214ENST00000600573 VMA21Q3ZAQ7 101 aa16.21■□□□□ 0.19
PNKP-214ENST00000600573 TPTE2P1Q5T6R2 138 aa16.21■□□□□ 0.19
PNKP-214ENST00000600573 ZNF787Q6DD87 383 aa16.21■□□□□ 0.19
PNKP-214ENST00000600573 CCDC144NLQ6NUI1 221 aa16.21■□□□□ 0.19
PNKP-214ENST00000600573 VMO1Q7Z5L0 202 aa16.21■□□□□ 0.19
PNKP-214ENST00000600573 THNSL2Q86YJ6 484 aa16.21■□□□□ 0.19
PNKP-214ENST00000600573 OR5B3Q8NH48 314 aa16.21■□□□□ 0.19
PNKP-214ENST00000600573 SIRT7Q9NRC8 400 aa16.21■□□□□ 0.19
PNKP-214ENST00000600573 UBE2L5PA0A1B0GUS4 154 aa16.2■□□□□ 0.18
PNKP-214ENST00000600573 SRRM4A7MD48 611 aaKnown RBP16.2■□□□□ 0.18
PNKP-214ENST00000600573 C15orf62A8K5M9 175 aa16.2■□□□□ 0.18
PNKP-214ENST00000600573 PMS2P5A8MQ11 134 aa16.2■□□□□ 0.18
PNKP-214ENST00000600573 SLC25A16P16260 332 aa16.2■□□□□ 0.18
PNKP-214ENST00000600573 VDAC2P45880 294 aaPredicted RBP16.2■□□□□ 0.18
PNKP-214ENST00000600573 DVL1P1P54792 670 aaPredicted RBP16.2■□□□□ 0.18
PNKP-214ENST00000600573 DIAPH2-AS1Q14236 149 aa16.2■□□□□ 0.18
PNKP-214ENST00000600573 LFNGQ8NES3 379 aa16.2■□□□□ 0.18
PNKP-214ENST00000600573 WDR61Q9GZS3 305 aaKnown RBP16.2■□□□□ 0.18
PNKP-214ENST00000600573 ENY2Q9NPA8 101 aa16.2■□□□□ 0.18
PNKP-214ENST00000600573 HEYLQ9NQ87 328 aaPredicted RBP16.2■□□□□ 0.18
PNKP-214ENST00000600573 TOX4O94842 621 aa16.19■□□□□ 0.18
PNKP-214ENST00000600573 CD1BP29016 333 aa16.19■□□□□ 0.18
PNKP-214ENST00000600573 HCP5Q6MZN7 132 aa16.19■□□□□ 0.18
PNKP-214ENST00000600573 MOB3BQ86TA1 216 aa16.19■□□□□ 0.18
PNKP-214ENST00000600573 TEX45Q8NA69 505 aa16.19■□□□□ 0.18
PNKP-214ENST00000600573 TMEM167AQ8TBQ9 72 aa16.19■□□□□ 0.18
PNKP-214ENST00000600573 TREM1Q9NP99 234 aa16.19■□□□□ 0.18
PNKP-214ENST00000600573 UQCC1Q9NVA1 299 aa16.19■□□□□ 0.18
PNKP-214ENST00000600573 BEX4Q9NWD9 120 aaPredicted RBP16.19■□□□□ 0.18
PNKP-214ENST00000600573 TBL2Q9Y4P3 447 aaKnown RBP16.19■□□□□ 0.18
PNKP-214ENST00000600573 TIMM9Q9Y5J7 89 aa16.19■□□□□ 0.18
PNKP-214ENST00000600573 OR51B2Q9Y5P1 312 aa16.19■□□□□ 0.18
PNKP-214ENST00000600573 SAA1P0DJI8 122 aaPredicted RBP16.19■□□□□ 0.18
PNKP-214ENST00000600573 FHITP49789 147 aa16.19■□□□□ 0.18
PNKP-214ENST00000600573 UBE2E1P51965 193 aa16.19■□□□□ 0.18
PNKP-214ENST00000600573 PERPQ96FX8 193 aa16.19■□□□□ 0.18
PNKP-214ENST00000600573 LPAR2Q9HBW0 351 aa16.19■□□□□ 0.18
PNKP-214ENST00000600573 RFNGQ9Y644 331 aa16.19■□□□□ 0.18
PNKP-214ENST00000600573 COL12A1Q99715 3063 aa16.18■□□□□ 0.18
PNKP-214ENST00000600573 TMEM218A2RU14 115 aa16.18■□□□□ 0.18
PNKP-214ENST00000600573 LGALS4P56470 323 aa16.18■□□□□ 0.18
PNKP-214ENST00000600573 VWC2Q2TAL6 325 aa16.18■□□□□ 0.18
PNKP-214ENST00000600573 TUSC1Q2TAM9 212 aa16.18■□□□□ 0.18
PNKP-214ENST00000600573 LRRC75A-AS1Q8N1F1 130 aa16.18■□□□□ 0.18
PNKP-214ENST00000600573 TAF15Q92804 592 aaKnown RBP eCLIP16.18■□□□□ 0.18
PNKP-214ENST00000600573 RSG1Q9BU20 258 aa16.18■□□□□ 0.18
PNKP-214ENST00000600573 FBXO7Q9Y3I1 522 aa16.18■□□□□ 0.18
PNKP-214ENST00000600573 IGHV4-61A0A0C4DH41 118 aa16.17■□□□□ 0.18
PNKP-214ENST00000600573 IFNA10P01566 189 aa16.17■□□□□ 0.18
PNKP-214ENST00000600573 BTBD17A6NE02 478 aa16.16■□□□□ 0.18
PNKP-214ENST00000600573 AGPAT2O15120 278 aa16.16■□□□□ 0.18
PNKP-214ENST00000600573 HOXB4P17483 251 aaPredicted RBP16.16■□□□□ 0.18
PNKP-214ENST00000600573 SNCAP37840 140 aa16.16■□□□□ 0.18
PNKP-214ENST00000600573 RPL8P62917 257 aaKnown RBP16.16■□□□□ 0.18
PNKP-214ENST00000600573 SERF2P84101 59 aa16.16■□□□□ 0.18
PNKP-214ENST00000600573 PRCDQ00LT1 54 aa16.16■□□□□ 0.18
PNKP-214ENST00000600573 PAX8Q06710 450 aa16.16■□□□□ 0.18
PNKP-214ENST00000600573 HABP2Q14520 560 aaPredicted RBP16.16■□□□□ 0.18
PNKP-214ENST00000600573 COMMD5Q9GZQ3 224 aa16.16■□□□□ 0.18
PNKP-214ENST00000600573 SPTAN1Q13813 2472 aaKnown RBP16.16■□□□□ 0.18
PNKP-214ENST00000600573 IGHV4-30-2A0A087WSY4 118 aa16.16■□□□□ 0.18
PNKP-214ENST00000600573 A0A1W2PPI3 338 aa16.16■□□□□ 0.18
PNKP-214ENST00000600573 INS-IGF2F8WCM5 200 aa16.16■□□□□ 0.18
PNKP-214ENST00000600573 IGLV2-23P01705 113 aa16.16■□□□□ 0.18
PNKP-214ENST00000600573 MAS1LP35410 378 aa16.16■□□□□ 0.18
PNKP-214ENST00000600573 DLX1P56177 255 aa16.16■□□□□ 0.18
PNKP-214ENST00000600573 RAB11AP62491 216 aa16.16■□□□□ 0.18
PNKP-214ENST00000600573 AKR1C1Q04828 323 aa16.16■□□□□ 0.18
PNKP-214ENST00000600573 OR1L8Q8NGR8 309 aa16.16■□□□□ 0.18
PNKP-214ENST00000600573 GGACTQ9BVM4 153 aa16.16■□□□□ 0.18
PNKP-214ENST00000600573 TMEM231Q9H6L2 316 aa16.16■□□□□ 0.18
PNKP-214ENST00000600573 FAM157AC9JC47 383 aa16.15■□□□□ 0.18
PNKP-214ENST00000600573 RNASEK-C17orf49H0YIS7 233 aa16.15■□□□□ 0.18
PNKP-214ENST00000600573 HBE1P02100 147 aa16.15■□□□□ 0.18
PNKP-214ENST00000600573 FGF7P21781 194 aa16.15■□□□□ 0.18
PNKP-214ENST00000600573 SRSF3P84103 164 aaKnown RBP16.15■□□□□ 0.18
PNKP-214ENST00000600573 CLEC12BQ2HXU8 276 aa16.15■□□□□ 0.18
PNKP-214ENST00000600573 MALSU1Q96EH3 234 aa16.15■□□□□ 0.18
PNKP-214ENST00000600573 PBDC1Q9BVG4 233 aa16.15■□□□□ 0.18
PNKP-214ENST00000600573 PLEKHA3Q9HB20 300 aa16.15■□□□□ 0.18
PNKP-214ENST00000600573 FAM96BQ9Y3D0 163 aa16.15■□□□□ 0.18
PNKP-214ENST00000600573 TEX50A0A1B0GTY4 177 aa16.14■□□□□ 0.17
PNKP-214ENST00000600573 A0A1W2PN81 502 aa16.14■□□□□ 0.17
PNKP-214ENST00000600573 APOC3P02656 99 aa16.14■□□□□ 0.17
PNKP-214ENST00000600573 CD5P06127 495 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms