RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 SELENOHQ8IZQ5 122 aaKnown RBP10.71□□□□□ -0.69
VRK3-219ENST00000600137 DMBX1Q8NFW5 382 aa10.71□□□□□ -0.69
VRK3-219ENST00000600137 OR4X2Q8NGF9 303 aa10.71□□□□□ -0.69
VRK3-219ENST00000600137 TMEM56Q96MV1 263 aa10.71□□□□□ -0.69
VRK3-219ENST00000600137 WDR12Q9GZL7 423 aaKnown RBP10.71□□□□□ -0.69
VRK3-219ENST00000600137 FLVCR2Q9UPI3 526 aa10.71□□□□□ -0.69
VRK3-219ENST00000600137 NSG2Q9Y328 171 aa10.71□□□□□ -0.69
VRK3-219ENST00000600137 TMEM56-RWDD3S4R434 201 aa10.71□□□□□ -0.69
VRK3-219ENST00000600137 TEX50A0A1B0GTY4 177 aa10.7□□□□□ -0.7
VRK3-219ENST00000600137 A0A1W2PN81 502 aa10.7□□□□□ -0.7
VRK3-219ENST00000600137 TCRBV4S1A1TA0A5B7 111 aa10.7□□□□□ -0.7
VRK3-219ENST00000600137 HMX3A6NHT5 357 aa10.7□□□□□ -0.7
VRK3-219ENST00000600137 LYRM1O43325 122 aa10.7□□□□□ -0.7
VRK3-219ENST00000600137 RBMXL2O75526 392 aaKnown RBP10.7□□□□□ -0.7
VRK3-219ENST00000600137 UPK1BO75841 260 aa10.7□□□□□ -0.7
VRK3-219ENST00000600137 BRI3O95415 125 aa10.7□□□□□ -0.7
VRK3-219ENST00000600137 SERPINE2P07093 398 aa10.7□□□□□ -0.7
VRK3-219ENST00000600137 AKR1C4P17516 323 aa10.7□□□□□ -0.7
VRK3-219ENST00000600137 HLA-GP17693 338 aa10.7□□□□□ -0.7
VRK3-219ENST00000600137 SLC6A1P30531 599 aa10.7□□□□□ -0.7
VRK3-219ENST00000600137 CHRNA7P36544 502 aa10.7□□□□□ -0.7
VRK3-219ENST00000600137 INPP1P49441 399 aa10.7□□□□□ -0.7
VRK3-219ENST00000600137 RAB9AP51151 201 aa10.7□□□□□ -0.7
VRK3-219ENST00000600137 RPL23AP62750 156 aaKnown RBP10.7□□□□□ -0.7
VRK3-219ENST00000600137 RBMS2Q15434 407 aaKnown RBP10.7□□□□□ -0.7
VRK3-219ENST00000600137 Q6ZRM9 215 aa10.7□□□□□ -0.7
VRK3-219ENST00000600137 SLC25A42Q86VD7 318 aa10.7□□□□□ -0.7
VRK3-219ENST00000600137 OR5T1Q8NG75 326 aa10.7□□□□□ -0.7
VRK3-219ENST00000600137 CASTOR1Q8WTX7 329 aa10.7□□□□□ -0.7
VRK3-219ENST00000600137 TMEM68Q96MH6 324 aa10.7□□□□□ -0.7
VRK3-219ENST00000600137 PRR13Q9NZ81 148 aa10.7□□□□□ -0.7
VRK3-219ENST00000600137 FOXA2Q9Y261 457 aaPredicted RBP10.7□□□□□ -0.7
VRK3-219ENST00000600137 TSSC4Q9Y5U2 329 aaPredicted RBP10.7□□□□□ -0.7
VRK3-219ENST00000600137 A0A0B4J293 547 aa10.69□□□□□ -0.7
VRK3-219ENST00000600137 CREBL2O60519 120 aaPredicted RBP10.69□□□□□ -0.7
VRK3-219ENST00000600137 TSPAN15O95858 294 aa10.69□□□□□ -0.7
VRK3-219ENST00000600137 OPN1MWP04001 364 aa10.69□□□□□ -0.7
VRK3-219ENST00000600137 APELAP0DMC3 54 aa10.69□□□□□ -0.7
VRK3-219ENST00000600137 OPN1MW2P0DN77 364 aa10.69□□□□□ -0.7
VRK3-219ENST00000600137 OPN1MW3P0DN78 364 aa10.69□□□□□ -0.7
VRK3-219ENST00000600137 RPL27AP46776 148 aaKnown RBP10.69□□□□□ -0.7
VRK3-219ENST00000600137 CDX1P47902 265 aaPredicted RBP10.69□□□□□ -0.7
VRK3-219ENST00000600137 KLK9Q2XQG4 91 aa10.69□□□□□ -0.7
VRK3-219ENST00000600137 NSUN5P1Q3KNT7 163 aa10.69□□□□□ -0.7
VRK3-219ENST00000600137 TMEM128Q5BJH2 165 aa10.69□□□□□ -0.7
VRK3-219ENST00000600137 PRR31Q5SQ13 230 aa10.69□□□□□ -0.7
VRK3-219ENST00000600137 SGPP2Q8IWX5 399 aa10.69□□□□□ -0.7
VRK3-219ENST00000600137 TTC9CQ8N5M4 171 aa10.69□□□□□ -0.7
VRK3-219ENST00000600137 ZNF491Q8N8L2 437 aa10.69□□□□□ -0.7
VRK3-219ENST00000600137 OR5M8Q8NGP6 311 aa10.69□□□□□ -0.7
VRK3-219ENST00000600137 ABHD5Q8WTS1 349 aa10.69□□□□□ -0.7
VRK3-219ENST00000600137 NDUFA4L2Q9NRX3 87 aa10.69□□□□□ -0.7
VRK3-219ENST00000600137 ZFP57Q9NU63 452 aa10.69□□□□□ -0.7
VRK3-219ENST00000600137 TMEM14BQ9NUH8 114 aa10.69□□□□□ -0.7
VRK3-219ENST00000600137 KLK9Q9UKQ9 250 aa10.69□□□□□ -0.7
VRK3-219ENST00000600137 NBEAL1Q6ZS30 2694 aa10.69□□□□□ -0.7
VRK3-219ENST00000600137 IGLC7A0M8Q6 106 aa10.68□□□□□ -0.7
VRK3-219ENST00000600137 CENPXA8MT69 81 aa10.68□□□□□ -0.7
VRK3-219ENST00000600137 CRYGCP07315 174 aa10.68□□□□□ -0.7
VRK3-219ENST00000600137 AREGP15514 252 aa10.68□□□□□ -0.7
VRK3-219ENST00000600137 ERVK-16P61578 105 aa10.68□□□□□ -0.7
VRK3-219ENST00000600137 ASAH1Q13510 395 aa10.68□□□□□ -0.7
VRK3-219ENST00000600137 CXorf66Q5JRM2 361 aaPredicted RBP10.68□□□□□ -0.7
VRK3-219ENST00000600137 C19orf35Q6ZS72 473 aa10.68□□□□□ -0.7
VRK3-219ENST00000600137 TMED4Q7Z7H5 227 aa10.68□□□□□ -0.7
VRK3-219ENST00000600137 FAM110DQ8TAY7 271 aaPredicted RBP10.68□□□□□ -0.7
VRK3-219ENST00000600137 SPIN2AQ99865 258 aa10.68□□□□□ -0.7
VRK3-219ENST00000600137 SPIN2BQ9BPZ2 258 aa10.68□□□□□ -0.7
VRK3-219ENST00000600137 KCNIP3Q9Y2W7 256 aa10.68□□□□□ -0.7
VRK3-219ENST00000600137 TRBV9A0A0B4J1U6 114 aa10.67□□□□□ -0.7
VRK3-219ENST00000600137 A0A1W2PRX2 142 aa10.67□□□□□ -0.7
VRK3-219ENST00000600137 C15orf61A6NNL5 157 aa10.67□□□□□ -0.7
VRK3-219ENST00000600137 ACTL6BO94805 426 aa10.67□□□□□ -0.7
VRK3-219ENST00000600137 PF4V1P10720 104 aa10.67□□□□□ -0.7
VRK3-219ENST00000600137 CTRB1P17538 263 aa10.67□□□□□ -0.7
VRK3-219ENST00000600137 PPP1R1AQ13522 171 aa10.67□□□□□ -0.7
VRK3-219ENST00000600137 TRIM16LQ309B1 348 aa10.67□□□□□ -0.7
VRK3-219ENST00000600137 ANKRD55Q3KP44 614 aa10.67□□□□□ -0.7
VRK3-219ENST00000600137 AARDQ4LEZ3 155 aa10.67□□□□□ -0.7
VRK3-219ENST00000600137 TMEM268Q5VZI3 342 aa10.67□□□□□ -0.7
VRK3-219ENST00000600137 CTRB2Q6GPI1 263 aa10.67□□□□□ -0.7
VRK3-219ENST00000600137 ETV3LQ6ZN32 361 aa10.67□□□□□ -0.7
VRK3-219ENST00000600137 H2BFWTQ7Z2G1 175 aa10.67□□□□□ -0.7
VRK3-219ENST00000600137 CENPSQ8N2Z9 138 aa10.67□□□□□ -0.7
VRK3-219ENST00000600137 OR10W1Q8NGF6 305 aa10.67□□□□□ -0.7
VRK3-219ENST00000600137 RBPMSQ93062 196 aaKnown RBP10.67□□□□□ -0.7
VRK3-219ENST00000600137 IL22RA2Q969J5 263 aa10.67□□□□□ -0.7
VRK3-219ENST00000600137 GPR146Q96CH1 333 aa10.67□□□□□ -0.7
VRK3-219ENST00000600137 MS4A10Q96PG2 267 aa10.67□□□□□ -0.7
VRK3-219ENST00000600137 FANCD2OSQ96PS1 177 aa10.67□□□□□ -0.7
VRK3-219ENST00000600137 FYTTD1Q96QD9 318 aaKnown RBP10.67□□□□□ -0.7
VRK3-219ENST00000600137 H3BUA1 57 aa10.66□□□□□ -0.7
VRK3-219ENST00000600137 I3L521 148 aa10.66□□□□□ -0.7
VRK3-219ENST00000600137 M0QZ24 198 aa10.66□□□□□ -0.7
VRK3-219ENST00000600137 SFT2D2O95562 160 aa10.66□□□□□ -0.7
VRK3-219ENST00000600137 TCRBP04435 133 aa10.66□□□□□ -0.7
VRK3-219ENST00000600137 WT1-ASQ06250 92 aa10.66□□□□□ -0.7
VRK3-219ENST00000600137 LYZL2Q7Z4W2 148 aa10.66□□□□□ -0.7
VRK3-219ENST00000600137 ZNF429Q86V71 674 aa10.66□□□□□ -0.7
VRK3-219ENST00000600137 LRTM2Q8N967 370 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms