RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 TMEM95Q3KNT9 176 aa9.97□□□□□ -0.81
CHMP2A-206ENST00000600118 C10orf55Q5SWW7 151 aa9.97□□□□□ -0.81
CHMP2A-206ENST00000600118 ZNF429Q86V71 674 aa9.97□□□□□ -0.81
CHMP2A-206ENST00000600118 OR4F5Q8NH21 305 aa9.97□□□□□ -0.81
CHMP2A-206ENST00000600118 OR2T6Q8NHC8 308 aa9.97□□□□□ -0.81
CHMP2A-206ENST00000600118 LINC01006Q8NI28 216 aa9.97□□□□□ -0.81
CHMP2A-206ENST00000600118 SRSF12Q8WXF0 261 aaKnown RBP9.97□□□□□ -0.81
CHMP2A-206ENST00000600118 ARPC1AQ92747 370 aa9.97□□□□□ -0.81
CHMP2A-206ENST00000600118 COA4Q9NYJ1 87 aa9.97□□□□□ -0.81
CHMP2A-206ENST00000600118 PRNDQ9UKY0 176 aa9.97□□□□□ -0.81
CHMP2A-206ENST00000600118 NSG2Q9Y328 171 aa9.97□□□□□ -0.81
CHMP2A-206ENST00000600118 TEX50A0A1B0GTY4 177 aa9.96□□□□□ -0.82
CHMP2A-206ENST00000600118 A0A1B0GU03 582 aa9.96□□□□□ -0.82
CHMP2A-206ENST00000600118 TMEM89A2RUT3 159 aa9.96□□□□□ -0.82
CHMP2A-206ENST00000600118 CGB1A6NKQ9 187 aa9.96□□□□□ -0.82
CHMP2A-206ENST00000600118 E7EUB6 86 aa9.96□□□□□ -0.82
CHMP2A-206ENST00000600118 AP4M1O00189 453 aa9.96□□□□□ -0.82
CHMP2A-206ENST00000600118 ATP6V0E1O15342 81 aa9.96□□□□□ -0.82
CHMP2A-206ENST00000600118 ACTL6BO94805 426 aa9.96□□□□□ -0.82
CHMP2A-206ENST00000600118 HOXB5P09067 269 aa9.96□□□□□ -0.82
CHMP2A-206ENST00000600118 SLC25A6P12236 298 aa9.96□□□□□ -0.82
CHMP2A-206ENST00000600118 OR2B8PP59922 312 aa9.96□□□□□ -0.82
CHMP2A-206ENST00000600118 GNB1P62873 340 aa9.96□□□□□ -0.82
CHMP2A-206ENST00000600118 TNXAQ16473 311 aa9.96□□□□□ -0.82
CHMP2A-206ENST00000600118 C19orf54Q5BKX5 351 aa9.96□□□□□ -0.82
CHMP2A-206ENST00000600118 GGNBP1Q5YKI7 109 aa9.96□□□□□ -0.82
CHMP2A-206ENST00000600118 OR4A16Q8NH70 328 aa9.96□□□□□ -0.82
CHMP2A-206ENST00000600118 SGMS2Q8NHU3 365 aa9.96□□□□□ -0.82
CHMP2A-206ENST00000600118 RNASE11Q8TAA1 199 aaKnown RBP9.96□□□□□ -0.82
CHMP2A-206ENST00000600118 WNT10AQ9GZT5 417 aa9.96□□□□□ -0.82
CHMP2A-206ENST00000600118 PARP11Q9NR21 331 aa9.96□□□□□ -0.82
CHMP2A-206ENST00000600118 CACNG5Q9UF02 275 aa9.96□□□□□ -0.82
CHMP2A-206ENST00000600118 ZNF257Q9Y2Q1 563 aa9.96□□□□□ -0.82
CHMP2A-206ENST00000600118 ALG5Q9Y673 324 aa9.96□□□□□ -0.82
CHMP2A-206ENST00000600118 CLPSL1A2RUU4 121 aa9.95□□□□□ -0.82
CHMP2A-206ENST00000600118 MPTX1A8MV57 137 aa9.95□□□□□ -0.82
CHMP2A-206ENST00000600118 TEX22C9J3V5 150 aa9.95□□□□□ -0.82
CHMP2A-206ENST00000600118 PITX3O75364 302 aa9.95□□□□□ -0.82
CHMP2A-206ENST00000600118 CNIH1O95406 144 aa9.95□□□□□ -0.82
CHMP2A-206ENST00000600118 SULT1A3P0DMM9 295 aa9.95□□□□□ -0.82
CHMP2A-206ENST00000600118 SULT1A4P0DMN0 295 aa9.95□□□□□ -0.82
CHMP2A-206ENST00000600118 VDAC2P45880 294 aaPredicted RBP9.95□□□□□ -0.82
CHMP2A-206ENST00000600118 RPL27AP46776 148 aaKnown RBP9.95□□□□□ -0.82
CHMP2A-206ENST00000600118 RIPPLY3P57055 190 aa9.95□□□□□ -0.82
CHMP2A-206ENST00000600118 CFHR3Q02985 330 aa9.95□□□□□ -0.82
CHMP2A-206ENST00000600118 SMCO1Q147U7 214 aa9.95□□□□□ -0.82
CHMP2A-206ENST00000600118 PDLIM3Q53GG5 364 aaPredicted RBP9.95□□□□□ -0.82
CHMP2A-206ENST00000600118 OR5B3Q8NH48 314 aa9.95□□□□□ -0.82
CHMP2A-206ENST00000600118 GRPEL2Q8TAA5 225 aa9.95□□□□□ -0.82
CHMP2A-206ENST00000600118 WIPF2Q8TF74 440 aaPredicted RBP9.95□□□□□ -0.82
CHMP2A-206ENST00000600118 NOL4LQ96MY1 436 aaPredicted RBP9.95□□□□□ -0.82
CHMP2A-206ENST00000600118 FAM103A1Q9BTL3 118 aaKnown RBP9.95□□□□□ -0.82
CHMP2A-206ENST00000600118 QTRT1Q9BXR0 403 aaKnown RBP9.95□□□□□ -0.82
CHMP2A-206ENST00000600118 COMMD5Q9GZQ3 224 aa9.95□□□□□ -0.82
CHMP2A-206ENST00000600118 NDUFA4L2Q9NRX3 87 aa9.95□□□□□ -0.82
CHMP2A-206ENST00000600118 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.95□□□□□ -0.82
CHMP2A-206ENST00000600118 FKBP11Q9NYL4 201 aa9.95□□□□□ -0.82
CHMP2A-206ENST00000600118 OR51B2Q9Y5P1 312 aa9.95□□□□□ -0.82
CHMP2A-206ENST00000600118 A0A1B0GUS0 222 aa9.94□□□□□ -0.82
CHMP2A-206ENST00000600118 MSGN1A6NI15 193 aa9.94□□□□□ -0.82
CHMP2A-206ENST00000600118 ST8SIA3O43173 380 aa9.94□□□□□ -0.82
CHMP2A-206ENST00000600118 OPN1MWP04001 364 aa9.94□□□□□ -0.82
CHMP2A-206ENST00000600118 OPN1MW2P0DN77 364 aa9.94□□□□□ -0.82
CHMP2A-206ENST00000600118 OPN1MW3P0DN78 364 aa9.94□□□□□ -0.82
CHMP2A-206ENST00000600118 MDKP21741 143 aaPredicted RBP9.94□□□□□ -0.82
CHMP2A-206ENST00000600118 PROK1P58294 105 aa9.94□□□□□ -0.82
CHMP2A-206ENST00000600118 HSPE1P61604 102 aaKnown RBP9.94□□□□□ -0.82
CHMP2A-206ENST00000600118 C2orf68Q2NKX9 166 aa9.94□□□□□ -0.82
CHMP2A-206ENST00000600118 AKIRIN2Q53H80 203 aa9.94□□□□□ -0.82
CHMP2A-206ENST00000600118 ASPHD1Q5U4P2 390 aa9.94□□□□□ -0.82
CHMP2A-206ENST00000600118 STPG2Q8N412 459 aa9.94□□□□□ -0.82
CHMP2A-206ENST00000600118 OR1L8Q8NGR8 309 aa9.94□□□□□ -0.82
CHMP2A-206ENST00000600118 OR52E5Q8NH55 327 aa9.94□□□□□ -0.82
CHMP2A-206ENST00000600118 SPIN2AQ99865 258 aa9.94□□□□□ -0.82
CHMP2A-206ENST00000600118 SPIN2BQ9BPZ2 258 aa9.94□□□□□ -0.82
CHMP2A-206ENST00000600118 SRSF8Q9BRL6 282 aaKnown RBP9.94□□□□□ -0.82
CHMP2A-206ENST00000600118 TNCP24821 2201 aa9.94□□□□□ -0.82
CHMP2A-206ENST00000600118 TRAV41A0A0B4J266 112 aa9.93□□□□□ -0.82
CHMP2A-206ENST00000600118 IGLC7A0M8Q6 106 aa9.93□□□□□ -0.82
CHMP2A-206ENST00000600118 G3V318 75 aa9.93□□□□□ -0.82
CHMP2A-206ENST00000600118 IFNA21P01568 189 aa9.93□□□□□ -0.82
CHMP2A-206ENST00000600118 PPIFP30405 207 aaKnown RBP9.93□□□□□ -0.82
CHMP2A-206ENST00000600118 FOXL1Q12952 345 aa9.93□□□□□ -0.82
CHMP2A-206ENST00000600118 ARSJQ5FYB0 599 aaPredicted RBP9.93□□□□□ -0.82
CHMP2A-206ENST00000600118 THOC7Q6I9Y2 204 aaKnown RBP9.93□□□□□ -0.82
CHMP2A-206ENST00000600118 UXS1Q8NBZ7 420 aa9.93□□□□□ -0.82
CHMP2A-206ENST00000600118 LFNGQ8NES3 379 aa9.93□□□□□ -0.82
CHMP2A-206ENST00000600118 OR10C1Q96KK4 312 aa9.93□□□□□ -0.82
CHMP2A-206ENST00000600118 TMEM68Q96MH6 324 aa9.93□□□□□ -0.82
CHMP2A-206ENST00000600118 C19orf24Q9BVV8 132 aa9.93□□□□□ -0.82
CHMP2A-206ENST00000600118 LINC00527Q9UJ94 153 aa9.93□□□□□ -0.82
CHMP2A-206ENST00000600118 RNF114Q9Y508 228 aa9.93□□□□□ -0.82
CHMP2A-206ENST00000600118 WSB1Q9Y6I7 421 aa9.93□□□□□ -0.82
CHMP2A-206ENST00000600118 HMX3A6NHT5 357 aa9.92□□□□□ -0.82
CHMP2A-206ENST00000600118 INS-IGF2F8WCM5 200 aa9.92□□□□□ -0.82
CHMP2A-206ENST00000600118 CCSO14618 274 aa9.92□□□□□ -0.82
CHMP2A-206ENST00000600118 RBMXL2O75526 392 aaKnown RBP9.92□□□□□ -0.82
CHMP2A-206ENST00000600118 TRAPPC2P0DI81 140 aa9.92□□□□□ -0.82
CHMP2A-206ENST00000600118 TRAPPC2BP0DI82 140 aa9.92□□□□□ -0.82
CHMP2A-206ENST00000600118 SPCS3P61009 180 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms