RNA–Protein interactions for RNA: ENST00000593257.1

TRMT1-223, Transcript of tRNA methyltransferase 1, human

TSL 4

Gene TRMT1, Length 408 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRMT1-223	ENST00000593257	MRPL41	Q8IXM3	137 aa	Known RBP	13.55	□□□□□ -0.24
TRMT1-223	ENST00000593257	GGACT	Q9BVM4	153 aa		13.55	□□□□□ -0.24
TRMT1-223	ENST00000593257	SH3BGRL3	Q9H299	93 aa		13.55	□□□□□ -0.24
TRMT1-223	ENST00000593257	UQCC1	Q9NVA1	299 aa		13.55	□□□□□ -0.24
TRMT1-223	ENST00000593257	TBL2	Q9Y4P3	447 aa	Known RBP	13.55	□□□□□ -0.24
TRMT1-223	ENST00000593257		A0A1W2PN81	502 aa		13.54	□□□□□ -0.24
TRMT1-223	ENST00000593257	ANKRD34B	A5PLL1	514 aa		13.54	□□□□□ -0.24
TRMT1-223	ENST00000593257	INS-IGF2	F8WCM5	200 aa		13.54	□□□□□ -0.24
TRMT1-223	ENST00000593257	MAS1L	P35410	378 aa		13.54	□□□□□ -0.24
TRMT1-223	ENST00000593257	CHRNA7	P36544	502 aa		13.54	□□□□□ -0.24
TRMT1-223	ENST00000593257	F2RL1	P55085	397 aa		13.54	□□□□□ -0.24
TRMT1-223	ENST00000593257	LGALS4	P56470	323 aa		13.54	□□□□□ -0.24
TRMT1-223	ENST00000593257	KLRD1	Q13241	179 aa		13.54	□□□□□ -0.24
TRMT1-223	ENST00000593257	AANAT	Q16613	207 aa		13.54	□□□□□ -0.24
TRMT1-223	ENST00000593257	VWC2	Q2TAL6	325 aa		13.54	□□□□□ -0.24
TRMT1-223	ENST00000593257	DPPA3	Q6W0C5	159 aa		13.54	□□□□□ -0.24
TRMT1-223	ENST00000593257	ETV3L	Q6ZN32	361 aa		13.54	□□□□□ -0.24
TRMT1-223	ENST00000593257	SLC24A4	Q8NFF2	622 aa		13.54	□□□□□ -0.24
TRMT1-223	ENST00000593257	MARC2	Q969Z3	335 aa		13.54	□□□□□ -0.24
TRMT1-223	ENST00000593257	PERP	Q96FX8	193 aa		13.54	□□□□□ -0.24
TRMT1-223	ENST00000593257	PSMG3	Q9BT73	122 aa	Predicted RBP	13.54	□□□□□ -0.24
TRMT1-223	ENST00000593257	REG4	Q9BYZ8	158 aa		13.54	□□□□□ -0.24
TRMT1-223	ENST00000593257	ZNF462	Q96JM2	2506 aa		13.53	□□□□□ -0.24
TRMT1-223	ENST00000593257	IGHV3-72	A0A0B4J1Y9	119 aa		13.53	□□□□□ -0.24
TRMT1-223	ENST00000593257	RAB19	A4D1S5	217 aa		13.53	□□□□□ -0.24
TRMT1-223	ENST00000593257	RNASEK-C17orf49	H0YIS7	233 aa		13.53	□□□□□ -0.24
TRMT1-223	ENST00000593257		J3QKU1	62 aa		13.53	□□□□□ -0.24
TRMT1-223	ENST00000593257	PRH1	P02810	166 aa		13.53	□□□□□ -0.24
TRMT1-223	ENST00000593257	NPY1R	P25929	384 aa		13.53	□□□□□ -0.24
TRMT1-223	ENST00000593257	CAMLG	P49069	296 aa		13.53	□□□□□ -0.24
TRMT1-223	ENST00000593257	AKR1C8P	Q5T2L2	129 aa		13.53	□□□□□ -0.24
TRMT1-223	ENST00000593257	IL34	Q6ZMJ4	242 aa		13.53	□□□□□ -0.24
TRMT1-223	ENST00000593257	TMEM182	Q6ZP80	229 aa	Predicted RBP	13.53	□□□□□ -0.24
TRMT1-223	ENST00000593257	THNSL2	Q86YJ6	484 aa		13.53	□□□□□ -0.24
TRMT1-223	ENST00000593257	MMD2	Q8IY49	270 aa		13.53	□□□□□ -0.24
TRMT1-223	ENST00000593257	HINT2	Q9BX68	163 aa		13.53	□□□□□ -0.24
TRMT1-223	ENST00000593257	WDR61	Q9GZS3	305 aa	Known RBP	13.53	□□□□□ -0.24
TRMT1-223	ENST00000593257	LPAR2	Q9HBW0	351 aa		13.53	□□□□□ -0.24
TRMT1-223	ENST00000593257	MMP26	Q9NRE1	261 aa		13.53	□□□□□ -0.24
TRMT1-223	ENST00000593257	PLA2G2E	Q9NZK7	142 aa		13.53	□□□□□ -0.24
TRMT1-223	ENST00000593257	TIMM9	Q9Y5J7	89 aa		13.53	□□□□□ -0.24
TRMT1-223	ENST00000593257	RELN	P78509	3460 aa		13.52	□□□□□ -0.25
TRMT1-223	ENST00000593257	IGHV4-61	A0A0C4DH41	118 aa		13.52	□□□□□ -0.25
TRMT1-223	ENST00000593257	UBE2L5P	A0A1B0GUS4	154 aa		13.52	□□□□□ -0.25
TRMT1-223	ENST00000593257	TIMM23	O14925	209 aa		13.52	□□□□□ -0.25
TRMT1-223	ENST00000593257	SLC25A17	O43808	307 aa		13.52	□□□□□ -0.25
TRMT1-223	ENST00000593257	SLC25A16	P16260	332 aa		13.52	□□□□□ -0.25
TRMT1-223	ENST00000593257	UBE2E1	P51965	193 aa		13.52	□□□□□ -0.25
TRMT1-223	ENST00000593257	DLK1	P80370	383 aa		13.52	□□□□□ -0.25
TRMT1-223	ENST00000593257	ERH	P84090	104 aa	Known RBP	13.52	□□□□□ -0.25
TRMT1-223	ENST00000593257	HABP2	Q14520	560 aa	Predicted RBP	13.52	□□□□□ -0.25
TRMT1-223	ENST00000593257	PSG5	Q15238	335 aa		13.52	□□□□□ -0.25
TRMT1-223	ENST00000593257	PXDC1	Q5TGL8	231 aa		13.52	□□□□□ -0.25
TRMT1-223	ENST00000593257	ZNF787	Q6DD87	383 aa		13.52	□□□□□ -0.25
TRMT1-223	ENST00000593257	UQCC3	Q6UW78	93 aa		13.52	□□□□□ -0.25
TRMT1-223	ENST00000593257		Q6ZRG5	221 aa		13.52	□□□□□ -0.25
TRMT1-223	ENST00000593257	TAF15	Q92804	592 aa	Known RBP eCLIP	13.52	□□□□□ -0.25
TRMT1-223	ENST00000593257	NDUFA4L2	Q9NRX3	87 aa		13.52	□□□□□ -0.25
TRMT1-223	ENST00000593257	FAM157A	C9JC47	383 aa		13.51	□□□□□ -0.25
TRMT1-223	ENST00000593257	VENTX	O95231	258 aa		13.51	□□□□□ -0.25
TRMT1-223	ENST00000593257	IFNA4	P05014	189 aa		13.51	□□□□□ -0.25
TRMT1-223	ENST00000593257	CRYGB	P07316	175 aa		13.51	□□□□□ -0.25
TRMT1-223	ENST00000593257	PLA2G2A	P14555	144 aa		13.51	□□□□□ -0.25
TRMT1-223	ENST00000593257	SERF2	P84101	59 aa		13.51	□□□□□ -0.25
TRMT1-223	ENST00000593257	PRSS8	Q16651	343 aa		13.51	□□□□□ -0.25
TRMT1-223	ENST00000593257	COMMD1	Q8N668	190 aa		13.51	□□□□□ -0.25
TRMT1-223	ENST00000593257	TBX15	Q96SF7	602 aa		13.51	□□□□□ -0.25
TRMT1-223	ENST00000593257	ZNF430	Q9H8G1	570 aa	Predicted RBP	13.51	□□□□□ -0.25
TRMT1-223	ENST00000593257	FASN	P49327	2511 aa	Known RBP	13.51	□□□□□ -0.25
TRMT1-223	ENST00000593257	ZFYVE26	Q68DK2	2539 aa		13.5	□□□□□ -0.25
TRMT1-223	ENST00000593257	IGHV4-30-2	A0A087WSY4	118 aa		13.5	□□□□□ -0.25
TRMT1-223	ENST00000593257	FNDC10	F2Z333	226 aa		13.5	□□□□□ -0.25
TRMT1-223	ENST00000593257	TEX46	H3BTG2	121 aa		13.5	□□□□□ -0.25
TRMT1-223	ENST00000593257		I3L521	148 aa		13.5	□□□□□ -0.25
TRMT1-223	ENST00000593257	RRH	O14718	337 aa		13.5	□□□□□ -0.25
TRMT1-223	ENST00000593257	SOX15	O60248	233 aa		13.5	□□□□□ -0.25
TRMT1-223	ENST00000593257	MPDU1	O75352	247 aa		13.5	□□□□□ -0.25
TRMT1-223	ENST00000593257	ACTL6B	O94805	426 aa		13.5	□□□□□ -0.25
TRMT1-223	ENST00000593257	MYOD1	P15172	320 aa		13.5	□□□□□ -0.25
TRMT1-223	ENST00000593257	RUNX1	Q01196	453 aa		13.5	□□□□□ -0.25
TRMT1-223	ENST00000593257	PAX8	Q06710	450 aa		13.5	□□□□□ -0.25
TRMT1-223	ENST00000593257	C2orf83	Q53S99	150 aa		13.5	□□□□□ -0.25
TRMT1-223	ENST00000593257	LDLRAD2	Q5SZI1	272 aa		13.5	□□□□□ -0.25
TRMT1-223	ENST00000593257	BTNL8	Q6UX41	500 aa		13.5	□□□□□ -0.25
TRMT1-223	ENST00000593257	CENPV	Q7Z7K6	275 aa	Predicted RBP	13.5	□□□□□ -0.25
TRMT1-223	ENST00000593257	CFHR4	Q92496	578 aa		13.5	□□□□□ -0.25
TRMT1-223	ENST00000593257	MALSU1	Q96EH3	234 aa		13.5	□□□□□ -0.25
TRMT1-223	ENST00000593257	HRH4	Q9H3N8	390 aa		13.5	□□□□□ -0.25
TRMT1-223	ENST00000593257	BEX4	Q9NWD9	120 aa	Predicted RBP	13.5	□□□□□ -0.25
TRMT1-223	ENST00000593257	METTL1	Q9UBP6	276 aa	Known RBP	13.5	□□□□□ -0.25
TRMT1-223	ENST00000593257	SIGLEC9	Q9Y336	463 aa		13.5	□□□□□ -0.25
TRMT1-223	ENST00000593257	HILPDA	Q9Y5L2	63 aa		13.5	□□□□□ -0.25
TRMT1-223	ENST00000593257	C17orf112	F2Z3M2	114 aa		13.49	□□□□□ -0.25
TRMT1-223	ENST00000593257	MOS	P00540	346 aa		13.49	□□□□□ -0.25
TRMT1-223	ENST00000593257	CA2	P00918	260 aa		13.49	□□□□□ -0.25
TRMT1-223	ENST00000593257	FGF7	P21781	194 aa		13.49	□□□□□ -0.25
TRMT1-223	ENST00000593257	SNCA	P37840	140 aa		13.49	□□□□□ -0.25
TRMT1-223	ENST00000593257	SUB1	P53999	127 aa	Known RBP eCLIP	13.49	□□□□□ -0.25
TRMT1-223	ENST00000593257	PJVK	Q0ZLH3	352 aa		13.49	□□□□□ -0.25
TRMT1-223	ENST00000593257	CLEC12B	Q2HXU8	276 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 52 ms