RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 RAB24Q969Q5 203 aa16.07■□□□□ 0.16
CLIP3-206ENST00000593074 YPEL4Q96NS1 127 aa16.07■□□□□ 0.16
CLIP3-206ENST00000593074 SEC14L6B5MCN3 397 aa16.06■□□□□ 0.16
CLIP3-206ENST00000593074 UPK2O00526 184 aa16.06■□□□□ 0.16
CLIP3-206ENST00000593074 NDUFA2O43678 99 aa16.06■□□□□ 0.16
CLIP3-206ENST00000593074 MAS1LP35410 378 aa16.06■□□□□ 0.16
CLIP3-206ENST00000593074 DLX6P56179 175 aa16.06■□□□□ 0.16
CLIP3-206ENST00000593074 SLC24A4Q8NFF2 622 aa16.06■□□□□ 0.16
CLIP3-206ENST00000593074 MRPL20Q9BYC9 149 aaKnown RBP16.06■□□□□ 0.16
CLIP3-206ENST00000593074 OR51B2Q9Y5P1 312 aa16.06■□□□□ 0.16
CLIP3-206ENST00000593074 SRRM4A7MD48 611 aaKnown RBP16.06■□□□□ 0.16
CLIP3-206ENST00000593074 NPY1RP25929 384 aa16.06■□□□□ 0.16
CLIP3-206ENST00000593074 TAGLN2P37802 199 aaKnown RBP16.06■□□□□ 0.16
CLIP3-206ENST00000593074 MEF2BQ02080 365 aaPredicted RBP16.06■□□□□ 0.16
CLIP3-206ENST00000593074 FAM71F2Q6NXP2 309 aa16.06■□□□□ 0.16
CLIP3-206ENST00000593074 LINC00311Q8N616 119 aa16.06■□□□□ 0.16
CLIP3-206ENST00000593074 BET1LQ9NYM9 111 aa16.06■□□□□ 0.16
CLIP3-206ENST00000593074 SMCO3A2RU48 225 aa16.05■□□□□ 0.16
CLIP3-206ENST00000593074 HMGB3O15347 200 aaKnown RBP16.05■□□□□ 0.16
CLIP3-206ENST00000593074 NDUFS6O75380 124 aaKnown RBP16.05■□□□□ 0.16
CLIP3-206ENST00000593074 IFNA4P05014 189 aa16.05■□□□□ 0.16
CLIP3-206ENST00000593074 OPRK1P41145 380 aa16.05■□□□□ 0.16
CLIP3-206ENST00000593074 TMEM155Q4W5P6 130 aa16.05■□□□□ 0.16
CLIP3-206ENST00000593074 OSR1Q8TAX0 266 aaPredicted RBP16.05■□□□□ 0.16
CLIP3-206ENST00000593074 ENY2Q9NPA8 101 aa16.05■□□□□ 0.16
CLIP3-206ENST00000593074 MANBALQ9NQG1 85 aa16.05■□□□□ 0.16
CLIP3-206ENST00000593074 LSM4Q9Y4Z0 139 aaKnown RBP16.05■□□□□ 0.16
CLIP3-206ENST00000593074 H0YJW9 148 aa16.04■□□□□ 0.16
CLIP3-206ENST00000593074 CYB5BO43169 146 aa16.04■□□□□ 0.16
CLIP3-206ENST00000593074 OR2C1O95371 312 aa16.04■□□□□ 0.16
CLIP3-206ENST00000593074 CD81P60033 236 aa16.04■□□□□ 0.16
CLIP3-206ENST00000593074 PRCDQ00LT1 54 aa16.04■□□□□ 0.16
CLIP3-206ENST00000593074 PNRC1Q12796 327 aaPredicted RBP16.04■□□□□ 0.16
CLIP3-206ENST00000593074 FAM24BQ8N5W8 94 aa16.04■□□□□ 0.16
CLIP3-206ENST00000593074 OR5AN1Q8NGI8 311 aa16.04■□□□□ 0.16
CLIP3-206ENST00000593074 MGST2Q99735 147 aa16.04■□□□□ 0.16
CLIP3-206ENST00000593074 TMPRSS5Q9H3S3 457 aa16.04■□□□□ 0.16
CLIP3-206ENST00000593074 ATRXP46100 2492 aa16.04■□□□□ 0.16
CLIP3-206ENST00000593074 NCOR2Q9Y618 2525 aa16.04■□□□□ 0.16
CLIP3-206ENST00000593074 A0A087X0M5 115 aa16.04■□□□□ 0.16
CLIP3-206ENST00000593074 A0A1B0GX30 115 aa16.04■□□□□ 0.16
CLIP3-206ENST00000593074 B4DEV8 164 aa16.04■□□□□ 0.16
CLIP3-206ENST00000593074 APOA2P02652 100 aa16.04■□□□□ 0.16
CLIP3-206ENST00000593074 SAA1P0DJI8 122 aaPredicted RBP16.04■□□□□ 0.16
CLIP3-206ENST00000593074 MYOD1P15172 320 aa16.04■□□□□ 0.16
CLIP3-206ENST00000593074 RAB5AP20339 215 aa16.04■□□□□ 0.16
CLIP3-206ENST00000593074 CDC34P49427 236 aaPredicted RBP16.04■□□□□ 0.16
CLIP3-206ENST00000593074 HABP2Q14520 560 aaPredicted RBP16.04■□□□□ 0.16
CLIP3-206ENST00000593074 RAB1CQ92928 201 aa16.04■□□□□ 0.16
CLIP3-206ENST00000593074 TMEM204Q9BSN7 226 aa16.04■□□□□ 0.16
CLIP3-206ENST00000593074 GGTLC1Q9BX51 225 aa16.04■□□□□ 0.16
CLIP3-206ENST00000593074 KBTBD11O94819 623 aa16.03■□□□□ 0.16
CLIP3-206ENST00000593074 CA2P00918 260 aa16.03■□□□□ 0.16
CLIP3-206ENST00000593074 PSMB3P49720 205 aa16.03■□□□□ 0.16
CLIP3-206ENST00000593074 TMEM249Q2WGJ8 235 aa16.03■□□□□ 0.16
CLIP3-206ENST00000593074 C1orf159Q96HA4 380 aa16.03■□□□□ 0.16
CLIP3-206ENST00000593074 J3QR06 171 aa16.03■□□□□ 0.16
CLIP3-206ENST00000593074 DEFA4P12838 97 aa16.03■□□□□ 0.16
CLIP3-206ENST00000593074 ZNF137PP52743 207 aa16.03■□□□□ 0.16
CLIP3-206ENST00000593074 RAB5BP61020 215 aa16.03■□□□□ 0.16
CLIP3-206ENST00000593074 ARSJQ5FYB0 599 aaPredicted RBP16.03■□□□□ 0.16
CLIP3-206ENST00000593074 MALSU1Q96EH3 234 aa16.03■□□□□ 0.16
CLIP3-206ENST00000593074 SIRT7Q9NRC8 400 aa16.03■□□□□ 0.16
CLIP3-206ENST00000593074 KLF2Q9Y5W3 355 aaPredicted RBP16.03■□□□□ 0.16
CLIP3-206ENST00000593074 hCG_1809904A0A1W2PP81 198 aa16.02■□□□□ 0.15
CLIP3-206ENST00000593074 A0A1W2PR64 198 aa16.02■□□□□ 0.15
CLIP3-206ENST00000593074 A0A1W2PRV1 198 aa16.02■□□□□ 0.15
CLIP3-206ENST00000593074 YIF1AO95070 293 aa16.02■□□□□ 0.15
CLIP3-206ENST00000593074 TMEM177Q53S58 311 aa16.02■□□□□ 0.15
CLIP3-206ENST00000593074 WDR25Q64LD2 544 aaPredicted RBP16.02■□□□□ 0.15
CLIP3-206ENST00000593074 OR10X1Q8NGY0 326 aa16.02■□□□□ 0.15
CLIP3-206ENST00000593074 ST6GALNAC6Q969X2 333 aa16.02■□□□□ 0.15
CLIP3-206ENST00000593074 TMEM186Q96B77 213 aa16.02■□□□□ 0.15
CLIP3-206ENST00000593074 HARBI1Q96MB7 349 aa16.02■□□□□ 0.15
CLIP3-206ENST00000593074 SAV1Q9H4B6 383 aaPredicted RBP16.02■□□□□ 0.15
CLIP3-206ENST00000593074 PLEKHA3Q9HB20 300 aa16.02■□□□□ 0.15
CLIP3-206ENST00000593074 NPVFQ9HCQ7 196 aa16.02■□□□□ 0.15
CLIP3-206ENST00000593074 FKBP11Q9NYL4 201 aa16.02■□□□□ 0.15
CLIP3-206ENST00000593074 C1orf196B1AJZ1 125 aa16.01■□□□□ 0.15
CLIP3-206ENST00000593074 FNDC10F2Z333 226 aa16.01■□□□□ 0.15
CLIP3-206ENST00000593074 TMEM250H0YL14 139 aa16.01■□□□□ 0.15
CLIP3-206ENST00000593074 FSTL3O95633 263 aa16.01■□□□□ 0.15
CLIP3-206ENST00000593074 AGAP20933 346 aa16.01■□□□□ 0.15
CLIP3-206ENST00000593074 GCSAMLQ5JQS6 135 aa16.01■□□□□ 0.15
CLIP3-206ENST00000593074 ZFP82Q8N141 532 aa16.01■□□□□ 0.15
CLIP3-206ENST00000593074 OR5B3Q8NH48 314 aa16.01■□□□□ 0.15
CLIP3-206ENST00000593074 BIN3Q9NQY0 253 aa16.01■□□□□ 0.15
CLIP3-206ENST00000593074 KCNIP2Q9NS61 270 aa16.01■□□□□ 0.15
CLIP3-206ENST00000593074 TRBV23-1A0A0A0MS06 115 aa16.01■□□□□ 0.15
CLIP3-206ENST00000593074 CXorf65A6NEN9 183 aa16.01■□□□□ 0.15
CLIP3-206ENST00000593074 TSPAN9O75954 239 aa16.01■□□□□ 0.15
CLIP3-206ENST00000593074 COL8A2P25067 703 aa16.01■□□□□ 0.15
CLIP3-206ENST00000593074 NABP2Q9BQ15 211 aa16.01■□□□□ 0.15
CLIP3-206ENST00000593074 SDF2L1Q9HCN8 221 aa16.01■□□□□ 0.15
CLIP3-206ENST00000593074 PXMP4Q9Y6I8 212 aa16.01■□□□□ 0.15
CLIP3-206ENST00000593074 CHD8Q9HCK8 2581 aa16.01■□□□□ 0.15
CLIP3-206ENST00000593074 TEX50A0A1B0GTY4 177 aa16■□□□□ 0.15
CLIP3-206ENST00000593074 ZNF727A8MUV8 499 aa16■□□□□ 0.15
CLIP3-206ENST00000593074 IGHV1-8P0DP01 117 aa16■□□□□ 0.15
CLIP3-206ENST00000593074 PPOXP50336 477 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms