RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 A6NNC1 897 aa8.44□□□□□ -1.06
VPS25-206ENST00000591584 SRRM4A7MD48 611 aaKnown RBP8.44□□□□□ -1.06
VPS25-206ENST00000591584 PRSS46E5RG02 174 aa8.44□□□□□ -1.06
VPS25-206ENST00000591584 LYNX1G3V0Z9 82 aa8.44□□□□□ -1.06
VPS25-206ENST00000591584 BUB1B-PAK6H3BSN5 160 aa8.44□□□□□ -1.06
VPS25-206ENST00000591584 IGKV1-16P04430 117 aa8.44□□□□□ -1.06
VPS25-206ENST00000591584 SOD3P08294 240 aa8.44□□□□□ -1.06
VPS25-206ENST00000591584 SAA1P0DJI8 122 aaPredicted RBP8.44□□□□□ -1.06
VPS25-206ENST00000591584 LYNX1P0DP58 116 aa8.44□□□□□ -1.06
VPS25-206ENST00000591584 IGFBP2P18065 325 aa8.44□□□□□ -1.06
VPS25-206ENST00000591584 GPX4P36969 197 aaPredicted RBP8.44□□□□□ -1.06
VPS25-206ENST00000591584 CEACAM3P40198 252 aa8.44□□□□□ -1.06
VPS25-206ENST00000591584 COMPP49747 757 aaPredicted RBP8.44□□□□□ -1.06
VPS25-206ENST00000591584 EFNA4P52798 201 aa8.44□□□□□ -1.06
VPS25-206ENST00000591584 GUCA2BQ16661 112 aa8.44□□□□□ -1.06
VPS25-206ENST00000591584 KIR3DL3Q8N743 410 aa8.44□□□□□ -1.06
VPS25-206ENST00000591584 OR10G9Q8NGN4 311 aa8.44□□□□□ -1.06
VPS25-206ENST00000591584 OR10G7Q8NGN6 311 aa8.44□□□□□ -1.06
VPS25-206ENST00000591584 TUBA4BQ9H853 241 aa8.44□□□□□ -1.06
VPS25-206ENST00000591584 NDUFA4L2Q9NRX3 87 aa8.44□□□□□ -1.06
VPS25-206ENST00000591584 ASPMQ8IZT6 3477 aa8.44□□□□□ -1.06
VPS25-206ENST00000591584 RAI1Q7Z5J4 1906 aaPredicted RBP8.43□□□□□ -1.06
VPS25-206ENST00000591584 LOC102723971A0A1B0GUV8 181 aa8.43□□□□□ -1.06
VPS25-206ENST00000591584 MAP1LC3B2A6NCE7 125 aa8.43□□□□□ -1.06
VPS25-206ENST00000591584 SEC14L6B5MCN3 397 aa8.43□□□□□ -1.06
VPS25-206ENST00000591584 C9JQL5 133 aa8.43□□□□□ -1.06
VPS25-206ENST00000591584 DNASE2O00115 360 aaPredicted RBP8.43□□□□□ -1.06
VPS25-206ENST00000591584 RRHO14718 337 aa8.43□□□□□ -1.06
VPS25-206ENST00000591584 SRP19P09132 144 aaKnown RBP8.43□□□□□ -1.06
VPS25-206ENST00000591584 GPR6P46095 362 aaPredicted RBP8.43□□□□□ -1.06
VPS25-206ENST00000591584 PSMB3P49720 205 aa8.43□□□□□ -1.06
VPS25-206ENST00000591584 CCL20P78556 96 aa8.43□□□□□ -1.06
VPS25-206ENST00000591584 RHEBQ15382 184 aa8.43□□□□□ -1.06
VPS25-206ENST00000591584 BSXQ3C1V8 233 aa8.43□□□□□ -1.06
VPS25-206ENST00000591584 SPINK9Q5DT21 86 aa8.43□□□□□ -1.06
VPS25-206ENST00000591584 FFAR4Q5NUL3 377 aa8.43□□□□□ -1.06
VPS25-206ENST00000591584 AVPI1Q5T686 147 aa8.43□□□□□ -1.06
VPS25-206ENST00000591584 TEPPQ6URK8 271 aa8.43□□□□□ -1.06
VPS25-206ENST00000591584 ATRAIDQ6UW56 229 aa8.43□□□□□ -1.06
VPS25-206ENST00000591584 TREML4Q6UXN2 200 aa8.43□□□□□ -1.06
VPS25-206ENST00000591584 OR11H6Q8NGC7 330 aa8.43□□□□□ -1.06
VPS25-206ENST00000591584 NANPQ8TBE9 248 aa8.43□□□□□ -1.06
VPS25-206ENST00000591584 RCC1LQ96I51 464 aaKnown RBP8.43□□□□□ -1.06
VPS25-206ENST00000591584 TXNDC17Q9BRA2 123 aa8.43□□□□□ -1.06
VPS25-206ENST00000591584 C19orf24Q9BVV8 132 aa8.43□□□□□ -1.06
VPS25-206ENST00000591584 SSBP3Q9BWW4 388 aaPredicted RBP8.43□□□□□ -1.06
VPS25-206ENST00000591584 MAP1LC3BQ9GZQ8 125 aa8.43□□□□□ -1.06
VPS25-206ENST00000591584 MANBALQ9NQG1 85 aa8.43□□□□□ -1.06
VPS25-206ENST00000591584 VAX2Q9UIW0 290 aa8.43□□□□□ -1.06
VPS25-206ENST00000591584 LSM4Q9Y4Z0 139 aaKnown RBP8.43□□□□□ -1.06
VPS25-206ENST00000591584 INSIG2Q9Y5U4 225 aa8.43□□□□□ -1.06
VPS25-206ENST00000591584 TLN1Q9Y490 2541 aaKnown RBP8.43□□□□□ -1.06
VPS25-206ENST00000591584 FRYQ5TBA9 3013 aa8.43□□□□□ -1.06
VPS25-206ENST00000591584 MGAQ8IWI9 3026 aa8.43□□□□□ -1.06
VPS25-206ENST00000591584 PCNX1Q96RV3 2341 aa8.42□□□□□ -1.06
VPS25-206ENST00000591584 MED19A0JLT2 244 aaPredicted RBP8.42□□□□□ -1.06
VPS25-206ENST00000591584 SMCO3A2RU48 225 aa8.42□□□□□ -1.06
VPS25-206ENST00000591584 OOSP1A8MZH6 123 aa8.42□□□□□ -1.06
VPS25-206ENST00000591584 CA2P00918 260 aa8.42□□□□□ -1.06
VPS25-206ENST00000591584 BCL2P10415 239 aa8.42□□□□□ -1.06
VPS25-206ENST00000591584 PRTN3P24158 256 aa8.42□□□□□ -1.06
VPS25-206ENST00000591584 PAX6P26367 422 aa8.42□□□□□ -1.06
VPS25-206ENST00000591584 RPL29P47914 159 aaKnown RBP8.42□□□□□ -1.06
VPS25-206ENST00000591584 ACSM6Q6P461 480 aa8.42□□□□□ -1.06
VPS25-206ENST00000591584 LCN15Q6UWW0 184 aa8.42□□□□□ -1.06
VPS25-206ENST00000591584 TMEM144Q7Z5S9 345 aa8.42□□□□□ -1.06
VPS25-206ENST00000591584 MMD2Q8IY49 270 aa8.42□□□□□ -1.06
VPS25-206ENST00000591584 RPP25LQ8N5L8 163 aaKnown RBP8.42□□□□□ -1.06
VPS25-206ENST00000591584 RNASEH2CQ8TDP1 164 aaKnown RBP8.42□□□□□ -1.06
VPS25-206ENST00000591584 RPEQ96AT9 228 aa8.42□□□□□ -1.06
VPS25-206ENST00000591584 SRSF8Q9BRL6 282 aaKnown RBP8.42□□□□□ -1.06
VPS25-206ENST00000591584 SMCO4Q9NRQ5 59 aa8.42□□□□□ -1.06
VPS25-206ENST00000591584 RFNGQ9Y644 331 aa8.42□□□□□ -1.06
VPS25-206ENST00000591584 ARFGEF3Q5TH69 2177 aa8.42□□□□□ -1.06
VPS25-206ENST00000591584 IGHV1-3A0A0C4DH29 117 aa8.41□□□□□ -1.06
VPS25-206ENST00000591584 A0A1W2PPV4 95 aa8.41□□□□□ -1.06
VPS25-206ENST00000591584 B4DEV8 164 aa8.41□□□□□ -1.06
VPS25-206ENST00000591584 LY6LH3BQJ8 138 aa8.41□□□□□ -1.06
VPS25-206ENST00000591584 ACTL6BO94805 426 aa8.41□□□□□ -1.06
VPS25-206ENST00000591584 MT-CO2P00403 227 aa8.41□□□□□ -1.06
VPS25-206ENST00000591584 IGLV2-23P01705 113 aa8.41□□□□□ -1.06
VPS25-206ENST00000591584 HTR1DP28221 377 aa8.41□□□□□ -1.06
VPS25-206ENST00000591584 CDC34P49427 236 aaPredicted RBP8.41□□□□□ -1.06
VPS25-206ENST00000591584 ELLP55199 621 aaPredicted RBP8.41□□□□□ -1.06
VPS25-206ENST00000591584 PNRC1Q12796 327 aaPredicted RBP8.41□□□□□ -1.06
VPS25-206ENST00000591584 ICAM4Q14773 271 aa8.41□□□□□ -1.06
VPS25-206ENST00000591584 ZNF726P1Q15940 193 aa8.41□□□□□ -1.06
VPS25-206ENST00000591584 FAM74A3Q4VXF1 159 aa8.41□□□□□ -1.06
VPS25-206ENST00000591584 ETFRF1Q6IPR1 90 aa8.41□□□□□ -1.06
VPS25-206ENST00000591584 SLC35E3Q7Z769 313 aa8.41□□□□□ -1.06
VPS25-206ENST00000591584 OR4P4Q8NGL7 312 aa8.41□□□□□ -1.06
VPS25-206ENST00000591584 SLC35E1Q96K37 410 aa8.41□□□□□ -1.06
VPS25-206ENST00000591584 RARRES2Q99969 163 aa8.41□□□□□ -1.06
VPS25-206ENST00000591584 HINT2Q9BX68 163 aa8.41□□□□□ -1.06
VPS25-206ENST00000591584 VSIRQ9H7M9 311 aa8.41□□□□□ -1.06
VPS25-206ENST00000591584 DPM3Q9P2X0 92 aa8.41□□□□□ -1.06
VPS25-206ENST00000591584 PRELID1Q9Y255 219 aa8.41□□□□□ -1.06
VPS25-206ENST00000591584 CEP295Q9C0D2 2601 aa8.41□□□□□ -1.06
VPS25-206ENST00000591584 SPTA1P02549 2419 aa8.4□□□□□ -1.06
VPS25-206ENST00000591584 TMEM250H0YL14 139 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms