RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 RITA1Q96K30 269 aa5.07□□□□□ -1.6
VPS4B-205ENST00000591383 WWC2-AS2Q96NR7 200 aa5.07□□□□□ -1.6
VPS4B-205ENST00000591383 HSPB9Q9BQS6 159 aa5.07□□□□□ -1.6
VPS4B-205ENST00000591383 BEX1Q9HBH7 125 aa5.07□□□□□ -1.6
VPS4B-205ENST00000591383 SLC2A8Q9NY64 477 aa5.07□□□□□ -1.6
VPS4B-205ENST00000591383 COMMD9Q9P000 198 aa5.07□□□□□ -1.6
VPS4B-205ENST00000591383 VSIG4Q9Y279 399 aa5.07□□□□□ -1.6
VPS4B-205ENST00000591383 NAP1L6A6NFF2 107 aa5.06□□□□□ -1.6
VPS4B-205ENST00000591383 H0Y980 276 aa5.06□□□□□ -1.6
VPS4B-205ENST00000591383 LYRM1O43325 122 aa5.06□□□□□ -1.6
VPS4B-205ENST00000591383 CREBL2O60519 120 aaPredicted RBP5.06□□□□□ -1.6
VPS4B-205ENST00000591383 UPK1BO75841 260 aa5.06□□□□□ -1.6
VPS4B-205ENST00000591383 NXPH3O95157 252 aa5.06□□□□□ -1.6
VPS4B-205ENST00000591383 CA2P00918 260 aa5.06□□□□□ -1.6
VPS4B-205ENST00000591383 SERPINE2P07093 398 aa5.06□□□□□ -1.6
VPS4B-205ENST00000591383 CTSDP07339 412 aaPredicted RBP5.06□□□□□ -1.6
VPS4B-205ENST00000591383 AKR1C4P17516 323 aa5.06□□□□□ -1.6
VPS4B-205ENST00000591383 AKR1C2P52895 323 aa5.06□□□□□ -1.6
VPS4B-205ENST00000591383 RND3P61587 244 aa5.06□□□□□ -1.6
VPS4B-205ENST00000591383 BLCAPP62952 87 aa5.06□□□□□ -1.6
VPS4B-205ENST00000591383 EBI3Q14213 229 aa5.06□□□□□ -1.6
VPS4B-205ENST00000591383 PSG5Q15238 335 aa5.06□□□□□ -1.6
VPS4B-205ENST00000591383 RBMS2Q15434 407 aaKnown RBP5.06□□□□□ -1.6
VPS4B-205ENST00000591383 SURF2Q15527 256 aaPredicted RBP5.06□□□□□ -1.6
VPS4B-205ENST00000591383 ECSCRQ19T08 205 aa5.06□□□□□ -1.6
VPS4B-205ENST00000591383 C11orf88Q6PI97 169 aa5.06□□□□□ -1.6
VPS4B-205ENST00000591383 C12orf54Q6X4T0 127 aa5.06□□□□□ -1.6
VPS4B-205ENST00000591383 VKORC1L1Q8N0U8 176 aa5.06□□□□□ -1.6
VPS4B-205ENST00000591383 FAM71E2Q8N5Q1 922 aa5.06□□□□□ -1.6
VPS4B-205ENST00000591383 ADAD2Q8NCV1 583 aaKnown RBP5.06□□□□□ -1.6
VPS4B-205ENST00000591383 OSR1Q8TAX0 266 aaPredicted RBP5.06□□□□□ -1.6
VPS4B-205ENST00000591383 ENKURQ8TC29 256 aa5.06□□□□□ -1.6
VPS4B-205ENST00000591383 ARPC1AQ92747 370 aa5.06□□□□□ -1.6
VPS4B-205ENST00000591383 ZNF486Q96H40 463 aaPredicted RBP5.06□□□□□ -1.6
VPS4B-205ENST00000591383 TSC22D3Q99576 134 aa5.06□□□□□ -1.6
VPS4B-205ENST00000591383 C7orf50Q9BRJ6 194 aaKnown RBP5.06□□□□□ -1.6
VPS4B-205ENST00000591383 NAA60Q9H7X0 242 aa5.06□□□□□ -1.6
VPS4B-205ENST00000591383 LINC00527Q9UJ94 153 aa5.06□□□□□ -1.6
VPS4B-205ENST00000591383 GAB2Q9UQC2 676 aa5.06□□□□□ -1.6
VPS4B-205ENST00000591383 RNF114Q9Y508 228 aa5.06□□□□□ -1.6
VPS4B-205ENST00000591383 C3orf85A0A1B0GTC6 90 aa5.05□□□□□ -1.6
VPS4B-205ENST00000591383 CLPSL1A2RUU4 121 aa5.05□□□□□ -1.6
VPS4B-205ENST00000591383 CRYM-AS1A6NIL9 109 aa5.05□□□□□ -1.6
VPS4B-205ENST00000591383 ARPC1BO15143 372 aaKnown RBP5.05□□□□□ -1.6
VPS4B-205ENST00000591383 ATP6V0E1O15342 81 aa5.05□□□□□ -1.6
VPS4B-205ENST00000591383 MPPED1O15442 326 aa5.05□□□□□ -1.6
VPS4B-205ENST00000591383 RBFOX2O43251 390 aaKnown RBP eCLIP5.05□□□□□ -1.6
VPS4B-205ENST00000591383 KCNAB3O43448 404 aa5.05□□□□□ -1.6
VPS4B-205ENST00000591383 KBTBD11O94819 623 aa5.05□□□□□ -1.6
VPS4B-205ENST00000591383 NDUFA3O95167 84 aa5.05□□□□□ -1.6
VPS4B-205ENST00000591383 CNIH1O95406 144 aa5.05□□□□□ -1.6
VPS4B-205ENST00000591383 HRASP01112 189 aa5.05□□□□□ -1.6
VPS4B-205ENST00000591383 IGLV2-23P01705 113 aa5.05□□□□□ -1.6
VPS4B-205ENST00000591383 HLA-DRB1P01911 266 aa5.05□□□□□ -1.6
VPS4B-205ENST00000591383 OR5AC1P0C628 307 aa5.05□□□□□ -1.6
VPS4B-205ENST00000591383 APELAP0DMC3 54 aa5.05□□□□□ -1.6
VPS4B-205ENST00000591383 VDAC1P21796 283 aa5.05□□□□□ -1.6
VPS4B-205ENST00000591383 F2RP25116 425 aa5.05□□□□□ -1.6
VPS4B-205ENST00000591383 BTCP35070 178 aa5.05□□□□□ -1.6
VPS4B-205ENST00000591383 G6PCP35575 357 aa5.05□□□□□ -1.6
VPS4B-205ENST00000591383 LPAR6P43657 344 aa5.05□□□□□ -1.6
VPS4B-205ENST00000591383 TAS2R31P59538 309 aa5.05□□□□□ -1.6
VPS4B-205ENST00000591383 OR2B8PP59922 312 aa5.05□□□□□ -1.6
VPS4B-205ENST00000591383 UBE2KP61086 200 aa5.05□□□□□ -1.6
VPS4B-205ENST00000591383 NDPQ00604 133 aa5.05□□□□□ -1.6
VPS4B-205ENST00000591383 PJVKQ0ZLH3 352 aa5.05□□□□□ -1.6
VPS4B-205ENST00000591383 ICAM4Q14773 271 aa5.05□□□□□ -1.6
VPS4B-205ENST00000591383 TNXAQ16473 311 aa5.05□□□□□ -1.6
VPS4B-205ENST00000591383 SP6Q3SY56 376 aa5.05□□□□□ -1.6
VPS4B-205ENST00000591383 C10orf55Q5SWW7 151 aa5.05□□□□□ -1.6
VPS4B-205ENST00000591383 FOXRED2Q8IWF2 684 aa5.05□□□□□ -1.6
VPS4B-205ENST00000591383 SGPP2Q8IWX5 399 aa5.05□□□□□ -1.6
VPS4B-205ENST00000591383 CENPSQ8N2Z9 138 aa5.05□□□□□ -1.6
VPS4B-205ENST00000591383 C3orf56Q8N813 242 aa5.05□□□□□ -1.6
VPS4B-205ENST00000591383 NPBQ8NG41 125 aa5.05□□□□□ -1.6
VPS4B-205ENST00000591383 LINC01006Q8NI28 216 aa5.05□□□□□ -1.6
VPS4B-205ENST00000591383 CD300LFQ8TDQ1 290 aa5.05□□□□□ -1.6
VPS4B-205ENST00000591383 DEDD2Q8WXF8 326 aa5.05□□□□□ -1.6
VPS4B-205ENST00000591383 NOL4LQ96MY1 436 aaPredicted RBP5.05□□□□□ -1.6
VPS4B-205ENST00000591383 SCGB3A2Q96PL1 93 aa5.05□□□□□ -1.6
VPS4B-205ENST00000591383 TP53RKQ96S44 253 aa5.05□□□□□ -1.6
VPS4B-205ENST00000591383 PHB2Q99623 299 aa5.05□□□□□ -1.6
VPS4B-205ENST00000591383 C20orf85Q9H1P6 137 aa5.05□□□□□ -1.6
VPS4B-205ENST00000591383 C5orf66Q9H5L9 145 aa5.05□□□□□ -1.6
VPS4B-205ENST00000591383 PLSCR3Q9NRY6 295 aa5.05□□□□□ -1.6
VPS4B-205ENST00000591383 TBC1D24Q9ULP9 559 aa5.05□□□□□ -1.6
VPS4B-205ENST00000591383 PLXNB1O43157 2135 aa5.05□□□□□ -1.6
VPS4B-205ENST00000591383 TRAV6A0A075B6T7 132 aa5.04□□□□□ -1.6
VPS4B-205ENST00000591383 IGHV7-81A0A0B4J1V7 117 aa5.04□□□□□ -1.6
VPS4B-205ENST00000591383 A0A1B0GUS0 222 aa5.04□□□□□ -1.6
VPS4B-205ENST00000591383 FAM240BA0A1B0GVZ2 78 aa5.04□□□□□ -1.6
VPS4B-205ENST00000591383 TMEM89A2RUT3 159 aa5.04□□□□□ -1.6
VPS4B-205ENST00000591383 PSMB11A5LHX3 300 aa5.04□□□□□ -1.6
VPS4B-205ENST00000591383 SRRM4A7MD48 611 aaKnown RBP5.04□□□□□ -1.6
VPS4B-205ENST00000591383 RBMXL2O75526 392 aaKnown RBP5.04□□□□□ -1.6
VPS4B-205ENST00000591383 NDUFB6O95139 128 aa5.04□□□□□ -1.6
VPS4B-205ENST00000591383 HPRT1P00492 218 aa5.04□□□□□ -1.6
VPS4B-205ENST00000591383 KRASP01116 189 aa5.04□□□□□ -1.6
VPS4B-205ENST00000591383 ANXA3P12429 323 aa5.04□□□□□ -1.6
VPS4B-205ENST00000591383 NQO2P16083 231 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms