RNA–Protein interactions for RNA: ENST00000590530.5

GCDH-212, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,871 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-212ENST00000590530 SPANXN5Q5MJ07 72 aa13.67□□□□□ -0.22
GCDH-212ENST00000590530 PUSL1Q8N0Z8 303 aaKnown RBP13.67□□□□□ -0.22
GCDH-212ENST00000590530 TMEM217Q8N7C4 229 aa13.67□□□□□ -0.22
GCDH-212ENST00000590530 OR4C13Q8NGP0 309 aa13.67□□□□□ -0.22
GCDH-212ENST00000590530 ZDHHC16Q969W1 377 aa13.67□□□□□ -0.22
GCDH-212ENST00000590530 FLYWCH2Q96CP2 140 aaKnown RBP13.67□□□□□ -0.22
GCDH-212ENST00000590530 AJUBAQ96IF1 538 aa13.67□□□□□ -0.22
GCDH-212ENST00000590530 RITA1Q96K30 269 aa13.67□□□□□ -0.22
GCDH-212ENST00000590530 CXorf58Q96LI9 332 aa13.67□□□□□ -0.22
GCDH-212ENST00000590530 HARBI1Q96MB7 349 aa13.67□□□□□ -0.22
GCDH-212ENST00000590530 PRNDQ9UKY0 176 aa13.67□□□□□ -0.22
GCDH-212ENST00000590530 ITPR3Q14573 2671 aa13.67□□□□□ -0.22
GCDH-212ENST00000590530 CENPVL3A0A0U1RRI6 287 aa13.67□□□□□ -0.22
GCDH-212ENST00000590530 LEUTXA8MZ59 168 aa13.67□□□□□ -0.22
GCDH-212ENST00000590530 IFNA17P01571 189 aa13.67□□□□□ -0.22
GCDH-212ENST00000590530 IGHV4-31P0DP07 118 aa13.67□□□□□ -0.22
GCDH-212ENST00000590530 FBLN7Q53RD9 439 aa13.67□□□□□ -0.22
GCDH-212ENST00000590530 COMMD7Q86VX2 200 aa13.67□□□□□ -0.22
GCDH-212ENST00000590530 OR4C12Q96R67 309 aa13.67□□□□□ -0.22
GCDH-212ENST00000590530 NUP50Q9UKX7 468 aa13.67□□□□□ -0.22
GCDH-212ENST00000590530 SOX21Q9Y651 276 aaPredicted RBP13.67□□□□□ -0.22
GCDH-212ENST00000590530 CR1P17927 2039 aa13.66□□□□□ -0.22
GCDH-212ENST00000590530 NOTCH2Q04721 2471 aa13.66□□□□□ -0.22
GCDH-212ENST00000590530 SRRM4A7MD48 611 aaKnown RBP13.66□□□□□ -0.22
GCDH-212ENST00000590530 UPK2O00526 184 aa13.66□□□□□ -0.22
GCDH-212ENST00000590530 METTL15P1P0C7V9 234 aa13.66□□□□□ -0.22
GCDH-212ENST00000590530 FAM157CP0CG43 387 aa13.66□□□□□ -0.22
GCDH-212ENST00000590530 SPP1P10451 314 aa13.66□□□□□ -0.22
GCDH-212ENST00000590530 TMEM249Q2WGJ8 235 aa13.66□□□□□ -0.22
GCDH-212ENST00000590530 RUSC1-AS1Q66K80 236 aa13.66□□□□□ -0.22
GCDH-212ENST00000590530 HAPLN4Q86UW8 402 aa13.66□□□□□ -0.22
GCDH-212ENST00000590530 PIP4P2Q8N4L2 257 aa13.66□□□□□ -0.22
GCDH-212ENST00000590530 LINC01356Q8N9X3 169 aa13.66□□□□□ -0.22
GCDH-212ENST00000590530 TSNAXQ99598 290 aaKnown RBP13.66□□□□□ -0.22
GCDH-212ENST00000590530 C7orf69Q9H7B7 122 aa13.66□□□□□ -0.22
GCDH-212ENST00000590530 TCF19Q9Y242 345 aa13.66□□□□□ -0.22
GCDH-212ENST00000590530 ZNF257Q9Y2Q1 563 aa13.66□□□□□ -0.22
GCDH-212ENST00000590530 STRAPQ9Y3F4 350 aaKnown RBP13.66□□□□□ -0.22
GCDH-212ENST00000590530 SAA1P0DJI8 122 aaPredicted RBP13.65□□□□□ -0.22
GCDH-212ENST00000590530 HTR1DP28221 377 aa13.65□□□□□ -0.22
GCDH-212ENST00000590530 VDAC2P45880 294 aaPredicted RBP13.65□□□□□ -0.22
GCDH-212ENST00000590530 SULT1A2P50226 295 aa13.65□□□□□ -0.22
GCDH-212ENST00000590530 TPTE2P1Q5T6R2 138 aa13.65□□□□□ -0.22
GCDH-212ENST00000590530 OR4A5Q8NH83 315 aa13.65□□□□□ -0.22
GCDH-212ENST00000590530 CLCC1Q96S66 551 aa13.65□□□□□ -0.22
GCDH-212ENST00000590530 TET2Q6N021 2002 aaPredicted RBP13.65□□□□□ -0.22
GCDH-212ENST00000590530 IGHV1-3A0A0C4DH29 117 aa13.65□□□□□ -0.22
GCDH-212ENST00000590530 A0A1W2PPI3 338 aa13.65□□□□□ -0.22
GCDH-212ENST00000590530 TGFAP01135 160 aa13.65□□□□□ -0.22
GCDH-212ENST00000590530 IGHV4-38-2P0DP08 117 aa13.65□□□□□ -0.22
GCDH-212ENST00000590530 CD24P25063 80 aa13.65□□□□□ -0.22
GCDH-212ENST00000590530 HSPE1P61604 102 aaKnown RBP13.65□□□□□ -0.22
GCDH-212ENST00000590530 VSTM2AQ8TAG5 236 aa13.65□□□□□ -0.22
GCDH-212ENST00000590530 RPEQ96AT9 228 aa13.65□□□□□ -0.22
GCDH-212ENST00000590530 SAT2Q96F10 170 aaPredicted RBP13.65□□□□□ -0.22
GCDH-212ENST00000590530 DPM3Q9P2X0 92 aa13.65□□□□□ -0.22
GCDH-212ENST00000590530 PFDN2Q9UHV9 154 aa13.65□□□□□ -0.22
GCDH-212ENST00000590530 FBXO24O75426 580 aa13.64□□□□□ -0.23
GCDH-212ENST00000590530 KBTBD11O94819 623 aa13.64□□□□□ -0.23
GCDH-212ENST00000590530 FGF2P09038 288 aa13.64□□□□□ -0.23
GCDH-212ENST00000590530 UBE2E1P51965 193 aa13.64□□□□□ -0.23
GCDH-212ENST00000590530 ARL16Q0P5N6 197 aa13.64□□□□□ -0.23
GCDH-212ENST00000590530 SSX2Q16385 188 aa13.64□□□□□ -0.23
GCDH-212ENST00000590530 MOB3BQ86TA1 216 aa13.64□□□□□ -0.23
GCDH-212ENST00000590530 FOXC2Q99958 501 aa13.64□□□□□ -0.23
GCDH-212ENST00000590530 PARD6GQ9BYG4 376 aaPredicted RBP13.64□□□□□ -0.23
GCDH-212ENST00000590530 MS4A7Q9GZW8 240 aaPredicted RBP13.64□□□□□ -0.23
GCDH-212ENST00000590530 FKBP11Q9NYL4 201 aa13.64□□□□□ -0.23
GCDH-212ENST00000590530 TRAV40A0A0B4J280 105 aa13.63□□□□□ -0.23
GCDH-212ENST00000590530 PMS2P5A8MQ11 134 aa13.63□□□□□ -0.23
GCDH-212ENST00000590530 SMAD7O15105 426 aaKnown RBP13.63□□□□□ -0.23
GCDH-212ENST00000590530 RPP30P78346 268 aaKnown RBP13.63□□□□□ -0.23
GCDH-212ENST00000590530 SPINK9Q5DT21 86 aa13.63□□□□□ -0.23
GCDH-212ENST00000590530 BRD3OSQ6XYD6 125 aa13.63□□□□□ -0.23
GCDH-212ENST00000590530 HSD17B11Q8NBQ5 300 aa13.63□□□□□ -0.23
GCDH-212ENST00000590530 TMEM167AQ8TBQ9 72 aa13.63□□□□□ -0.23
GCDH-212ENST00000590530 GNPNAT1Q96EK6 184 aaPredicted RBP13.63□□□□□ -0.23
GCDH-212ENST00000590530 HIPK2Q9H2X6 1198 aa13.63□□□□□ -0.23
GCDH-212ENST00000590530 OR51B2Q9Y5P1 312 aa13.63□□□□□ -0.23
GCDH-212ENST00000590530 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.63□□□□□ -0.237e-7■■■□□ 18.9
GCDH-212ENST00000590530 CREBBPQ92793 2442 aa13.63□□□□□ -0.23
GCDH-212ENST00000590530 C15orf62A8K5M9 175 aa13.63□□□□□ -0.23
GCDH-212ENST00000590530 TIMM23O14925 209 aa13.63□□□□□ -0.23
GCDH-212ENST00000590530 IFNA5P01569 189 aa13.63□□□□□ -0.23
GCDH-212ENST00000590530 IGLV2-23P01705 113 aa13.63□□□□□ -0.23
GCDH-212ENST00000590530 SAA4P35542 130 aa13.63□□□□□ -0.23
GCDH-212ENST00000590530 LGALS7P47929 136 aa13.63□□□□□ -0.23
GCDH-212ENST00000590530 SLC38A11Q08AI6 406 aa13.63□□□□□ -0.23
GCDH-212ENST00000590530 ATP6V1FQ16864 119 aa13.63□□□□□ -0.23
GCDH-212ENST00000590530 KLF17Q5JT82 389 aaPredicted RBP13.63□□□□□ -0.23
GCDH-212ENST00000590530 OR5B3Q8NH48 314 aa13.63□□□□□ -0.23
GCDH-212ENST00000590530 PINX1Q96BK5 328 aaKnown RBP13.63□□□□□ -0.23
GCDH-212ENST00000590530 CITED4Q96RK1 184 aa13.63□□□□□ -0.23
GCDH-212ENST00000590530 PLA2G2EQ9NZK7 142 aa13.63□□□□□ -0.23
GCDH-212ENST00000590530 TRAV20A0A0B4J274 112 aa13.62□□□□□ -0.23
GCDH-212ENST00000590530 ATP6V0CP27449 155 aa13.62□□□□□ -0.23
GCDH-212ENST00000590530 CEACAM3P40198 252 aa13.62□□□□□ -0.23
GCDH-212ENST00000590530 HOXA1P49639 335 aaPredicted RBP13.62□□□□□ -0.23
GCDH-212ENST00000590530 RAB5CP51148 216 aa13.62□□□□□ -0.23
GCDH-212ENST00000590530 RPS16P62249 146 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms