RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 SPIN2AQ99865 258 aa13.41□□□□□ -0.26
PRKCSH-203ENST00000586486 SPIN2BQ9BPZ2 258 aa13.41□□□□□ -0.26
PRKCSH-203ENST00000586486 FKBP11Q9NYL4 201 aa13.41□□□□□ -0.26
PRKCSH-203ENST00000586486 CACNG5Q9UF02 275 aa13.41□□□□□ -0.26
PRKCSH-203ENST00000586486 ZNF257Q9Y2Q1 563 aa13.41□□□□□ -0.26
PRKCSH-203ENST00000586486 NSG2Q9Y328 171 aa13.41□□□□□ -0.26
PRKCSH-203ENST00000586486 PLXNB1O43157 2135 aa13.41□□□□□ -0.26
PRKCSH-203ENST00000586486 CRIP2P52943 208 aaPredicted RBP13.4□□□□□ -0.26
PRKCSH-203ENST00000586486 OR2B8PP59922 312 aa13.4□□□□□ -0.26
PRKCSH-203ENST00000586486 SRSF2Q01130 221 aaKnown RBP13.4□□□□□ -0.26
PRKCSH-203ENST00000586486 SMCO1Q147U7 214 aa13.4□□□□□ -0.26
PRKCSH-203ENST00000586486 FXYD3Q14802 87 aa13.4□□□□□ -0.26
PRKCSH-203ENST00000586486 C9orf152Q5JTZ5 239 aa13.4□□□□□ -0.26
PRKCSH-203ENST00000586486 UXS1Q8NBZ7 420 aa13.4□□□□□ -0.26
PRKCSH-203ENST00000586486 OR5B3Q8NH48 314 aa13.4□□□□□ -0.26
PRKCSH-203ENST00000586486 ARPC1AQ92747 370 aa13.4□□□□□ -0.26
PRKCSH-203ENST00000586486 COMMD5Q9GZQ3 224 aa13.4□□□□□ -0.26
PRKCSH-203ENST00000586486 C16orf95Q9H693 158 aa13.4□□□□□ -0.26
PRKCSH-203ENST00000586486 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.4□□□□□ -0.26
PRKCSH-203ENST00000586486 SSNA1O43805 119 aa13.39□□□□□ -0.27
PRKCSH-203ENST00000586486 IGF1P05019 195 aa13.39□□□□□ -0.27
PRKCSH-203ENST00000586486 GNB1P62873 340 aa13.39□□□□□ -0.27
PRKCSH-203ENST00000586486 Q6ZNX1 250 aa13.39□□□□□ -0.27
PRKCSH-203ENST00000586486 SRSF12Q8WXF0 261 aaKnown RBP13.39□□□□□ -0.27
PRKCSH-203ENST00000586486 CACFD1Q9UGQ2 172 aa13.39□□□□□ -0.27
PRKCSH-203ENST00000586486 OR51B2Q9Y5P1 312 aa13.39□□□□□ -0.27
PRKCSH-203ENST00000586486 TET2Q6N021 2002 aaPredicted RBP13.39□□□□□ -0.27
PRKCSH-203ENST00000586486 MPTX1A8MV57 137 aa13.39□□□□□ -0.27
PRKCSH-203ENST00000586486 ATP6V0E1O15342 81 aa13.39□□□□□ -0.27
PRKCSH-203ENST00000586486 PITX3O75364 302 aa13.39□□□□□ -0.27
PRKCSH-203ENST00000586486 CNIH1O95406 144 aa13.39□□□□□ -0.27
PRKCSH-203ENST00000586486 RPL27AP46776 148 aaKnown RBP13.39□□□□□ -0.27
PRKCSH-203ENST00000586486 C10orf55Q5SWW7 151 aa13.39□□□□□ -0.27
PRKCSH-203ENST00000586486 THOC7Q6I9Y2 204 aaKnown RBP13.39□□□□□ -0.27
PRKCSH-203ENST00000586486 OR2T6Q8NHC8 308 aa13.39□□□□□ -0.27
PRKCSH-203ENST00000586486 QTRT1Q9BXR0 403 aaKnown RBP13.39□□□□□ -0.27
PRKCSH-203ENST00000586486 LINC01548A6NM66 108 aa13.38□□□□□ -0.27
PRKCSH-203ENST00000586486 AP4M1O00189 453 aa13.38□□□□□ -0.27
PRKCSH-203ENST00000586486 RBMXL2O75526 392 aaKnown RBP13.38□□□□□ -0.27
PRKCSH-203ENST00000586486 HKR1P10072 659 aa13.38□□□□□ -0.27
PRKCSH-203ENST00000586486 EGR2P11161 476 aaPredicted RBP13.38□□□□□ -0.27
PRKCSH-203ENST00000586486 PDLIM3Q53GG5 364 aaPredicted RBP13.38□□□□□ -0.27
PRKCSH-203ENST00000586486 OR5M8Q8NGP6 311 aa13.38□□□□□ -0.27
PRKCSH-203ENST00000586486 OR1L8Q8NGR8 309 aa13.38□□□□□ -0.27
PRKCSH-203ENST00000586486 OR52E5Q8NH55 327 aa13.38□□□□□ -0.27
PRKCSH-203ENST00000586486 SGMS2Q8NHU3 365 aa13.38□□□□□ -0.27
PRKCSH-203ENST00000586486 PARP11Q9NR21 331 aa13.38□□□□□ -0.27
PRKCSH-203ENST00000586486 FBXO7Q9Y3I1 522 aa13.38□□□□□ -0.27
PRKCSH-203ENST00000586486 TEX50A0A1B0GTY4 177 aa13.37□□□□□ -0.27
PRKCSH-203ENST00000586486 CGB1A6NKQ9 187 aa13.37□□□□□ -0.27
PRKCSH-203ENST00000586486 CCSO14618 274 aa13.37□□□□□ -0.27
PRKCSH-203ENST00000586486 ST8SIA3O43173 380 aa13.37□□□□□ -0.27
PRKCSH-203ENST00000586486 MYOD1P15172 320 aa13.37□□□□□ -0.27
PRKCSH-203ENST00000586486 HSPE1P61604 102 aaKnown RBP13.37□□□□□ -0.27
PRKCSH-203ENST00000586486 C2orf68Q2NKX9 166 aa13.37□□□□□ -0.27
PRKCSH-203ENST00000586486 OR4F5Q8NH21 305 aa13.37□□□□□ -0.27
PRKCSH-203ENST00000586486 GRPEL2Q8TAA5 225 aa13.37□□□□□ -0.27
PRKCSH-203ENST00000586486 OR10C1Q96KK4 312 aa13.37□□□□□ -0.27
PRKCSH-203ENST00000586486 SRSF8Q9BRL6 282 aaKnown RBP13.37□□□□□ -0.27
PRKCSH-203ENST00000586486 NDUFA4L2Q9NRX3 87 aa13.37□□□□□ -0.27
PRKCSH-203ENST00000586486 SERTAD4Q9NUC0 356 aa13.37□□□□□ -0.27
PRKCSH-203ENST00000586486 A0A1B0GW64 132 aa13.36□□□□□ -0.27
PRKCSH-203ENST00000586486 TEX22C9J3V5 150 aa13.36□□□□□ -0.27
PRKCSH-203ENST00000586486 E7EUB6 86 aa13.36□□□□□ -0.27
PRKCSH-203ENST00000586486 GOSR2O14653 212 aa13.36□□□□□ -0.27
PRKCSH-203ENST00000586486 VDAC2P45880 294 aaPredicted RBP13.36□□□□□ -0.27
PRKCSH-203ENST00000586486 PRCDQ00LT1 54 aa13.36□□□□□ -0.27
PRKCSH-203ENST00000586486 IAH1Q2TAA2 248 aaPredicted RBP13.36□□□□□ -0.27
PRKCSH-203ENST00000586486 TMEM95Q3KNT9 176 aa13.36□□□□□ -0.27
PRKCSH-203ENST00000586486 ARSJQ5FYB0 599 aaPredicted RBP13.36□□□□□ -0.27
PRKCSH-203ENST00000586486 OR1S1Q8NH92 325 aa13.36□□□□□ -0.27
PRKCSH-203ENST00000586486 FAM103A1Q9BTL3 118 aaKnown RBP13.36□□□□□ -0.27
PRKCSH-203ENST00000586486 PDCD10Q9BUL8 212 aa13.36□□□□□ -0.27
PRKCSH-203ENST00000586486 HSPB7Q9UBY9 170 aa13.36□□□□□ -0.27
PRKCSH-203ENST00000586486 MSGN1A6NI15 193 aa13.35□□□□□ -0.27
PRKCSH-203ENST00000586486 FAM90A26D6RGX4 464 aa13.35□□□□□ -0.27
PRKCSH-203ENST00000586486 OPN1MWP04001 364 aa13.35□□□□□ -0.27
PRKCSH-203ENST00000586486 TRAPPC2P0DI81 140 aa13.35□□□□□ -0.27
PRKCSH-203ENST00000586486 TRAPPC2BP0DI82 140 aa13.35□□□□□ -0.27
PRKCSH-203ENST00000586486 OPN1MW2P0DN77 364 aa13.35□□□□□ -0.27
PRKCSH-203ENST00000586486 OPN1MW3P0DN78 364 aa13.35□□□□□ -0.27
PRKCSH-203ENST00000586486 SPCS3P61009 180 aa13.35□□□□□ -0.27
PRKCSH-203ENST00000586486 AKIRIN2Q53H80 203 aa13.35□□□□□ -0.27
PRKCSH-203ENST00000586486 C19orf54Q5BKX5 351 aa13.35□□□□□ -0.27
PRKCSH-203ENST00000586486 GSG1LQ6UXU4 331 aa13.35□□□□□ -0.27
PRKCSH-203ENST00000586486 HSD17B13Q7Z5P4 300 aaPredicted RBP13.35□□□□□ -0.27
PRKCSH-203ENST00000586486 STPG2Q8N412 459 aa13.35□□□□□ -0.27
PRKCSH-203ENST00000586486 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.35□□□□□ -0.27
PRKCSH-203ENST00000586486 ZBTB8BQ8NAP8 495 aaPredicted RBP13.35□□□□□ -0.27
PRKCSH-203ENST00000586486 OR4D5Q8NGN0 318 aa13.35□□□□□ -0.27
PRKCSH-203ENST00000586486 LINC01006Q8NI28 216 aa13.35□□□□□ -0.27
PRKCSH-203ENST00000586486 ABHD5Q8WTS1 349 aa13.35□□□□□ -0.27
PRKCSH-203ENST00000586486 TAF15Q92804 592 aaKnown RBP eCLIP13.35□□□□□ -0.27
PRKCSH-203ENST00000586486 TMEM68Q96MH6 324 aa13.35□□□□□ -0.27
PRKCSH-203ENST00000586486 MED28Q9H204 178 aa13.35□□□□□ -0.27
PRKCSH-203ENST00000586486 C13orf42A0A1B0GVH6 325 aa13.35□□□□□ -0.27
PRKCSH-203ENST00000586486 C5orf51A6NDU8 294 aa13.35□□□□□ -0.27
PRKCSH-203ENST00000586486 IFNA17P01571 189 aa13.35□□□□□ -0.27
PRKCSH-203ENST00000586486 RRAS2P62070 204 aaPredicted RBP13.35□□□□□ -0.27
PRKCSH-203ENST00000586486 TNFRSF9Q07011 255 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms