RNA–Protein interactions for RNA: ENST00000585672.5

MBD1-212, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-212ENST00000585672 UBALD1Q8TB05 177 aa12.38□□□□□ -0.43
MBD1-212ENST00000585672 FAM168AQ92567 244 aa12.38□□□□□ -0.43
MBD1-212ENST00000585672 MCRIP2Q9BUT9 160 aaKnown RBP12.38□□□□□ -0.43
MBD1-212ENST00000585672 FGF23Q9GZV9 251 aaPredicted RBP12.38□□□□□ -0.43
MBD1-212ENST00000585672 SERTAD4Q9NUC0 356 aa12.38□□□□□ -0.43
MBD1-212ENST00000585672 KLRF1Q9NZS2 232 aa12.38□□□□□ -0.43
MBD1-212ENST00000585672 CHD7Q9P2D1 2997 aa12.38□□□□□ -0.43
MBD1-212ENST00000585672 IGHV5-51A0A0C4DH38 117 aa12.37□□□□□ -0.43
MBD1-212ENST00000585672 C15orf62A8K5M9 175 aa12.37□□□□□ -0.43
MBD1-212ENST00000585672 ISLRO14498 428 aa12.37□□□□□ -0.43
MBD1-212ENST00000585672 SNAI2O43623 268 aa12.37□□□□□ -0.43
MBD1-212ENST00000585672 LINC00271P0C7V0 271 aa12.37□□□□□ -0.43
MBD1-212ENST00000585672 OPRK1P41145 380 aa12.37□□□□□ -0.43
MBD1-212ENST00000585672 VEGFBP49765 207 aa12.37□□□□□ -0.43
MBD1-212ENST00000585672 TFF2Q03403 129 aa12.37□□□□□ -0.43
MBD1-212ENST00000585672 FAM27BQ5VT28 67 aa12.37□□□□□ -0.43
MBD1-212ENST00000585672 Q6ZSR6 202 aa12.37□□□□□ -0.43
MBD1-212ENST00000585672 STPG3Q8N7X2 389 aa12.37□□□□□ -0.43
MBD1-212ENST00000585672 ZNF407Q9C0G0 2248 aa12.37□□□□□ -0.43
MBD1-212ENST00000585672 TMEM265A0A087WTH1 108 aa12.37□□□□□ -0.43
MBD1-212ENST00000585672 IGHV3-15A0A0B4J1V0 119 aa12.37□□□□□ -0.43
MBD1-212ENST00000585672 C3orf80F5H4A9 247 aa12.37□□□□□ -0.43
MBD1-212ENST00000585672 H3BRM9 83 aa12.37□□□□□ -0.43
MBD1-212ENST00000585672 MC5RP33032 325 aa12.37□□□□□ -0.43
MBD1-212ENST00000585672 MEF2CQ06413 473 aaPredicted RBP12.37□□□□□ -0.43
MBD1-212ENST00000585672 SHISA6Q6ZSJ9 500 aa12.37□□□□□ -0.43
MBD1-212ENST00000585672 TSTD1Q8NFU3 115 aa12.37□□□□□ -0.43
MBD1-212ENST00000585672 WIPF2Q8TF74 440 aaPredicted RBP12.37□□□□□ -0.43
MBD1-212ENST00000585672 JKAMPQ9P055 326 aa12.37□□□□□ -0.43
MBD1-212ENST00000585672 SEC16AO15027 2179 aa12.36□□□□□ -0.43
MBD1-212ENST00000585672 COL5A1P20908 1838 aaPredicted RBP12.36□□□□□ -0.43
MBD1-212ENST00000585672 ZNF816Q0VGE8 651 aaPredicted RBP12.36□□□□□ -0.43
MBD1-212ENST00000585672 IBA57Q5T440 356 aaKnown RBP12.36□□□□□ -0.43
MBD1-212ENST00000585672 OR10AG1Q8NH19 301 aa12.36□□□□□ -0.43
MBD1-212ENST00000585672 ZNF48Q96MX3 618 aaPredicted RBP12.36□□□□□ -0.43
MBD1-212ENST00000585672 MGST2Q99735 147 aa12.36□□□□□ -0.43
MBD1-212ENST00000585672 SSBP4Q9BWG4 385 aaPredicted RBP12.36□□□□□ -0.43
MBD1-212ENST00000585672 TRBV6-6A0A0A6YYG2 114 aa12.36□□□□□ -0.43
MBD1-212ENST00000585672 TEX48A0A1B0GUV7 120 aa12.36□□□□□ -0.43
MBD1-212ENST00000585672 F2RL2O00254 374 aa12.36□□□□□ -0.43
MBD1-212ENST00000585672 IGLV2-8P01709 118 aa12.36□□□□□ -0.43
MBD1-212ENST00000585672 CKS1BP61024 79 aa12.36□□□□□ -0.43
MBD1-212ENST00000585672 HSD52Q0P140 79 aa12.36□□□□□ -0.43
MBD1-212ENST00000585672 RAB31Q13636 194 aa12.36□□□□□ -0.43
MBD1-212ENST00000585672 SLC22A18ASQ8N1D0 253 aa12.36□□□□□ -0.43
MBD1-212ENST00000585672 PERPQ96FX8 193 aa12.36□□□□□ -0.43
MBD1-212ENST00000585672 TMEM191AQ9H0A3 160 aa12.36□□□□□ -0.43
MBD1-212ENST00000585672 NPIPB11E5RHQ5 1161 aa12.35□□□□□ -0.43
MBD1-212ENST00000585672 APOA2P02652 100 aa12.35□□□□□ -0.43
MBD1-212ENST00000585672 RPL24P83731 157 aaKnown RBP12.35□□□□□ -0.43
MBD1-212ENST00000585672 ZXDAP98168 799 aa12.35□□□□□ -0.43
MBD1-212ENST00000585672 RUNX3Q13761 415 aa12.35□□□□□ -0.43
MBD1-212ENST00000585672 PRR31Q5SQ13 230 aa12.35□□□□□ -0.43
MBD1-212ENST00000585672 TREML4Q6UXN2 200 aa12.35□□□□□ -0.43
MBD1-212ENST00000585672 SSBP3Q9BWW4 388 aaPredicted RBP12.35□□□□□ -0.43
MBD1-212ENST00000585672 PHF7Q9BWX1 381 aaPredicted RBP12.35□□□□□ -0.43
MBD1-212ENST00000585672 TRAV24A0A0B4J272 114 aa12.35□□□□□ -0.43
MBD1-212ENST00000585672 IGHV1-24A0A0C4DH33 117 aa12.35□□□□□ -0.43
MBD1-212ENST00000585672 A0A0G2JLM5 398 aa12.35□□□□□ -0.43
MBD1-212ENST00000585672 A0A0G2JMM0 328 aa12.35□□□□□ -0.43
MBD1-212ENST00000585672 A0A1W2PPB8 328 aa12.35□□□□□ -0.43
MBD1-212ENST00000585672 KIR3DP1A8MWS1 328 aa12.35□□□□□ -0.43
MBD1-212ENST00000585672 HBZP02008 142 aa12.35□□□□□ -0.43
MBD1-212ENST00000585672 HNRNPA1P09651 372 aaKnown RBP eCLIP12.35□□□□□ -0.43
MBD1-212ENST00000585672 AREGP15514 252 aa12.35□□□□□ -0.43
MBD1-212ENST00000585672 GPM6AP51674 278 aa12.35□□□□□ -0.43
MBD1-212ENST00000585672 MFAP2P55001 183 aa12.35□□□□□ -0.43
MBD1-212ENST00000585672 GFERP55789 205 aa12.35□□□□□ -0.43
MBD1-212ENST00000585672 TIGITQ495A1 244 aa12.35□□□□□ -0.43
MBD1-212ENST00000585672 PDLIM3Q53GG5 364 aaPredicted RBP12.35□□□□□ -0.43
MBD1-212ENST00000585672 OR13H1Q8NG92 308 aa12.35□□□□□ -0.43
MBD1-212ENST00000585672 GGTLC1Q9BX51 225 aa12.35□□□□□ -0.43
MBD1-212ENST00000585672 MS4A6AQ9H2W1 248 aa12.35□□□□□ -0.43
MBD1-212ENST00000585672 C21orf140B9A014 251 aa12.34□□□□□ -0.43
MBD1-212ENST00000585672 RHBDL1O75783 438 aa12.34□□□□□ -0.43
MBD1-212ENST00000585672 HIST1H1EP10412 219 aaKnown RBP12.34□□□□□ -0.43
MBD1-212ENST00000585672 BPIFA4PQ86YQ2 179 aa12.34□□□□□ -0.43
MBD1-212ENST00000585672 RPP25Q9BUL9 199 aaKnown RBP12.34□□□□□ -0.43
MBD1-212ENST00000585672 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.34□□□□□ -0.43
MBD1-212ENST00000585672 SPAARA0A1B0GVQ0 90 aa12.34□□□□□ -0.43
MBD1-212ENST00000585672 PSMB11A5LHX3 300 aa12.34□□□□□ -0.43
MBD1-212ENST00000585672 COX8AP10176 69 aa12.34□□□□□ -0.43
MBD1-212ENST00000585672 ZNF32P17041 273 aa12.34□□□□□ -0.43
MBD1-212ENST00000585672 RPL30P62888 115 aaKnown RBP12.34□□□□□ -0.43
MBD1-212ENST00000585672 KRTAP27-1Q3LI81 207 aa12.34□□□□□ -0.43
MBD1-212ENST00000585672 DIDO1Q9BTC0 2240 aaKnown RBP12.34□□□□□ -0.43
MBD1-212ENST00000585672 RBMXL2O75526 392 aaKnown RBP12.33□□□□□ -0.44
MBD1-212ENST00000585672 LEPROTL1O95214 131 aa12.33□□□□□ -0.44
MBD1-212ENST00000585672 COL9A1P20849 921 aa12.33□□□□□ -0.44
MBD1-212ENST00000585672 NTF4P34130 210 aa12.33□□□□□ -0.44
MBD1-212ENST00000585672 TMEM196Q5HYL7 178 aa12.33□□□□□ -0.44
MBD1-212ENST00000585672 CCDC144NLQ6NUI1 221 aa12.33□□□□□ -0.44
MBD1-212ENST00000585672 RASL11AQ6T310 242 aa12.33□□□□□ -0.44
MBD1-212ENST00000585672 TMEM251Q8N6I4 163 aa12.33□□□□□ -0.44
MBD1-212ENST00000585672 VSTM2AQ8TAG5 236 aa12.33□□□□□ -0.44
MBD1-212ENST00000585672 SSMEM1Q8WWF3 244 aa12.33□□□□□ -0.44
MBD1-212ENST00000585672 ZNF488Q96MN9 340 aa12.33□□□□□ -0.44
MBD1-212ENST00000585672 UCN2Q96RP3 112 aa12.33□□□□□ -0.44
MBD1-212ENST00000585672 SPCS1Q9Y6A9 102 aa12.33□□□□□ -0.44
MBD1-212ENST00000585672 SYNGR1O43759 233 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms