RNA–Protein interactions for RNA: ENST00000582594.5

PPP4R1-222, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 1 (best)

Gene PPP4R1, Length 2,982 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-222	ENST00000582594		Q0VG73	95 aa		7.92	□□□□□ -1.14
PPP4R1-222	ENST00000582594	EFNB3	Q15768	340 aa		7.92	□□□□□ -1.14
PPP4R1-222	ENST00000582594	TBC1D28	Q2M2D7	210 aa		7.92	□□□□□ -1.14
PPP4R1-222	ENST00000582594	RPL39P5	Q59GN2	51 aa		7.92	□□□□□ -1.14
PPP4R1-222	ENST00000582594	CENPW	Q5EE01	88 aa		7.92	□□□□□ -1.14
PPP4R1-222	ENST00000582594	PRR31	Q5SQ13	230 aa		7.92	□□□□□ -1.14
PPP4R1-222	ENST00000582594	C1orf174	Q8IYL3	243 aa		7.92	□□□□□ -1.14
PPP4R1-222	ENST00000582594	OR4B1	Q8NGF8	309 aa		7.92	□□□□□ -1.14
PPP4R1-222	ENST00000582594	CT55	Q8WUE5	264 aa		7.92	□□□□□ -1.14
PPP4R1-222	ENST00000582594	TTTY12	Q9BZ98	90 aa		7.92	□□□□□ -1.14
PPP4R1-222	ENST00000582594	PTPRB	P23467	1997 aa		7.92	□□□□□ -1.14
PPP4R1-222	ENST00000582594		M0R1X1	148 aa		7.92	□□□□□ -1.14
PPP4R1-222	ENST00000582594	SMPD2	O60906	423 aa		7.92	□□□□□ -1.14
PPP4R1-222	ENST00000582594	CRYAB	P02511	175 aa	Known RBP	7.92	□□□□□ -1.14
PPP4R1-222	ENST00000582594	MYOD1	P15172	320 aa		7.92	□□□□□ -1.14
PPP4R1-222	ENST00000582594	SRI	P30626	198 aa		7.92	□□□□□ -1.14
PPP4R1-222	ENST00000582594	HINT1	P49773	126 aa	Predicted RBP	7.92	□□□□□ -1.14
PPP4R1-222	ENST00000582594	GNG10	P50151	68 aa		7.92	□□□□□ -1.14
PPP4R1-222	ENST00000582594	ZNF83	P51522	516 aa		7.92	□□□□□ -1.14
PPP4R1-222	ENST00000582594	HNRNPA3	P51991	378 aa	Known RBP	7.92	□□□□□ -1.14
PPP4R1-222	ENST00000582594	MIR17HG	Q75NE6	70 aa		7.92	□□□□□ -1.14
PPP4R1-222	ENST00000582594	TIPARP	Q7Z3E1	657 aa	Known RBP	7.92	□□□□□ -1.14
PPP4R1-222	ENST00000582594	STPG3	Q8N7X2	389 aa		7.92	□□□□□ -1.14
PPP4R1-222	ENST00000582594	BCL2L2	Q92843	193 aa	Predicted RBP	7.92	□□□□□ -1.14
PPP4R1-222	ENST00000582594	RNF2	Q99496	336 aa		7.92	□□□□□ -1.14
PPP4R1-222	ENST00000582594	FAM173A	Q9BQD7	235 aa		7.92	□□□□□ -1.14
PPP4R1-222	ENST00000582594	HINT2	Q9BX68	163 aa		7.92	□□□□□ -1.14
PPP4R1-222	ENST00000582594	SERTAD4	Q9NUC0	356 aa		7.92	□□□□□ -1.14
PPP4R1-222	ENST00000582594	PROP1	O75360	226 aa		7.92	□□□□□ -1.14
PPP4R1-222	ENST00000582594	HYPM	O75409	117 aa		7.92	□□□□□ -1.14
PPP4R1-222	ENST00000582594	GNG4	P50150	75 aa		7.92	□□□□□ -1.14
PPP4R1-222	ENST00000582594	SLC35E4	Q6ICL7	350 aa		7.92	□□□□□ -1.14
PPP4R1-222	ENST00000582594	LCN12	Q6JVE5	192 aa		7.92	□□□□□ -1.14
PPP4R1-222	ENST00000582594	TMEM251	Q8N6I4	163 aa		7.92	□□□□□ -1.14
PPP4R1-222	ENST00000582594	NHLRC2	Q8NBF2	726 aa		7.92	□□□□□ -1.14
PPP4R1-222	ENST00000582594	HSD17B10	Q99714	261 aa	Known RBP	7.92	□□□□□ -1.14
PPP4R1-222	ENST00000582594	B4GALT7	Q9UBV7	327 aa		7.92	□□□□□ -1.14
PPP4R1-222	ENST00000582594	MED13	Q9UHV7	2174 aa		7.91	□□□□□ -1.14
PPP4R1-222	ENST00000582594	PRRC2C	Q9Y520	2896 aa	Known RBP	7.91	□□□□□ -1.14
PPP4R1-222	ENST00000582594	AHRR	A9YTQ3	701 aa		7.91	□□□□□ -1.14
PPP4R1-222	ENST00000582594	GFRA3	O60609	400 aa		7.91	□□□□□ -1.14
PPP4R1-222	ENST00000582594	CA1	P00915	261 aa	Predicted RBP	7.91	□□□□□ -1.14
PPP4R1-222	ENST00000582594	C3orf79	P0CE67	100 aa		7.91	□□□□□ -1.14
PPP4R1-222	ENST00000582594	MGST1	P10620	155 aa	Known RBP	7.91	□□□□□ -1.14
PPP4R1-222	ENST00000582594	TDGF1	P13385	188 aa		7.91	□□□□□ -1.14
PPP4R1-222	ENST00000582594	IGFBP2	P18065	325 aa		7.91	□□□□□ -1.14
PPP4R1-222	ENST00000582594	DUT	P33316	252 aa	Known RBP	7.91	□□□□□ -1.14
PPP4R1-222	ENST00000582594	CTRL	P40313	264 aa		7.91	□□□□□ -1.14
PPP4R1-222	ENST00000582594	TMEM249	Q2WGJ8	235 aa		7.91	□□□□□ -1.14
PPP4R1-222	ENST00000582594	ZNF766	Q5HY98	468 aa		7.91	□□□□□ -1.14
PPP4R1-222	ENST00000582594	FAM216A	Q8WUB2	273 aa		7.91	□□□□□ -1.14
PPP4R1-222	ENST00000582594	KCNS1	Q96KK3	526 aa		7.91	□□□□□ -1.14
PPP4R1-222	ENST00000582594	SFXN3	Q9BWM7	321 aa		7.91	□□□□□ -1.14
PPP4R1-222	ENST00000582594	GCM1	Q9NP62	436 aa		7.91	□□□□□ -1.14
PPP4R1-222	ENST00000582594	HELT	A6NFD8	242 aa		7.91	□□□□□ -1.14
PPP4R1-222	ENST00000582594	PRSS46	E5RG02	174 aa		7.91	□□□□□ -1.14
PPP4R1-222	ENST00000582594	MPDU1	O75352	247 aa		7.91	□□□□□ -1.14
PPP4R1-222	ENST00000582594	VDAC2	P45880	294 aa	Predicted RBP	7.91	□□□□□ -1.14
PPP4R1-222	ENST00000582594	RHOB	P62745	196 aa		7.91	□□□□□ -1.14
PPP4R1-222	ENST00000582594	RPP30	P78346	268 aa	Known RBP	7.91	□□□□□ -1.14
PPP4R1-222	ENST00000582594	PSG5	Q15238	335 aa		7.91	□□□□□ -1.14
PPP4R1-222	ENST00000582594	TMEM136	Q6ZRR5	245 aa		7.91	□□□□□ -1.14
PPP4R1-222	ENST00000582594	CDX2	Q99626	313 aa	Predicted RBP	7.91	□□□□□ -1.14
PPP4R1-222	ENST00000582594	TXNDC17	Q9BRA2	123 aa		7.91	□□□□□ -1.14
PPP4R1-222	ENST00000582594	GNB1L	Q9BYB4	327 aa		7.91	□□□□□ -1.14
PPP4R1-222	ENST00000582594	GNG12	Q9UBI6	72 aa		7.91	□□□□□ -1.14
PPP4R1-222	ENST00000582594	UQCR10	Q9UDW1	63 aa		7.91	□□□□□ -1.14
PPP4R1-222	ENST00000582594	SLC45A2	Q9UMX9	530 aa		7.91	□□□□□ -1.14
PPP4R1-222	ENST00000582594	LAMTOR2	Q9Y2Q5	125 aa		7.91	□□□□□ -1.14
PPP4R1-222	ENST00000582594	TRGV10	A0A0A0MS01	117 aa		7.9	□□□□□ -1.14
PPP4R1-222	ENST00000582594	LYZL6	O75951	148 aa		7.9	□□□□□ -1.14
PPP4R1-222	ENST00000582594	IGLC2	P0DOY2	106 aa		7.9	□□□□□ -1.14
PPP4R1-222	ENST00000582594	IGLC3	P0DOY3	106 aa		7.9	□□□□□ -1.14
PPP4R1-222	ENST00000582594	GATA2	P23769	480 aa	Predicted RBP	7.9	□□□□□ -1.14
PPP4R1-222	ENST00000582594	PTTG1IP	P53801	180 aa		7.9	□□□□□ -1.14
PPP4R1-222	ENST00000582594	FBXW9	Q5XUX1	488 aa		7.9	□□□□□ -1.14
PPP4R1-222	ENST00000582594	UNQ5815/PRO19632	Q6UWF5	114 aa		7.9	□□□□□ -1.14
PPP4R1-222	ENST00000582594	RNASE8	Q8TDE3	154 aa	Known RBP	7.9	□□□□□ -1.14
PPP4R1-222	ENST00000582594	NANOS1	Q8WY41	292 aa	Known RBP	7.9	□□□□□ -1.14
PPP4R1-222	ENST00000582594	LEAP2	Q969E1	77 aa		7.9	□□□□□ -1.14
PPP4R1-222	ENST00000582594	DEFB127	Q9H1M4	99 aa		7.9	□□□□□ -1.14
PPP4R1-222	ENST00000582594	NPVF	Q9HCQ7	196 aa		7.9	□□□□□ -1.14
PPP4R1-222	ENST00000582594	YLPM1	P49750	1951 aa	Known RBP	7.9	□□□□□ -1.14
PPP4R1-222	ENST00000582594	TRAV9-1	A0A075B6T8	112 aa		7.9	□□□□□ -1.15
PPP4R1-222	ENST00000582594	C20orf202	A1L168	122 aa		7.9	□□□□□ -1.15
PPP4R1-222	ENST00000582594	NTN3	O00634	580 aa	Predicted RBP	7.9	□□□□□ -1.15
PPP4R1-222	ENST00000582594	CCL25	O15444	150 aa		7.9	□□□□□ -1.15
PPP4R1-222	ENST00000582594	OR10J4	P0C629	311 aa		7.9	□□□□□ -1.15
PPP4R1-222	ENST00000582594	UTF1	Q5T230	341 aa		7.9	□□□□□ -1.15
PPP4R1-222	ENST00000582594	DCAF12	Q5T6F0	453 aa		7.9	□□□□□ -1.15
PPP4R1-222	ENST00000582594	ABHD17B	Q5VST6	288 aa		7.9	□□□□□ -1.15
PPP4R1-222	ENST00000582594	ACP7	Q6ZNF0	438 aa		7.9	□□□□□ -1.15
PPP4R1-222	ENST00000582594	MOB3B	Q86TA1	216 aa		7.9	□□□□□ -1.15
PPP4R1-222	ENST00000582594	NIT1	Q86X76	327 aa		7.9	□□□□□ -1.15
PPP4R1-222	ENST00000582594	C11orf53	Q8IXP5	236 aa		7.9	□□□□□ -1.15
PPP4R1-222	ENST00000582594	GMPPA	Q96IJ6	420 aa	Predicted RBP	7.9	□□□□□ -1.15
PPP4R1-222	ENST00000582594	TMEM140	Q9NV12	185 aa		7.9	□□□□□ -1.15
PPP4R1-222	ENST00000582594	TCF19	Q9Y242	345 aa		7.9	□□□□□ -1.15
PPP4R1-222	ENST00000582594	DPRX	A6NFQ7	191 aa		7.89	□□□□□ -1.15
PPP4R1-222	ENST00000582594	BMPR1B	O00238	502 aa		7.89	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms