RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 DNAH7Q8WXX0 4024 aa16.94■□□□□ 0.3
CASC3-207ENST00000581849 UPK2O00526 184 aa16.94■□□□□ 0.3
CASC3-207ENST00000581849 GNRHRP30968 328 aa16.94■□□□□ 0.3
CASC3-207ENST00000581849 OR2B8PP59922 312 aa16.94■□□□□ 0.3
CASC3-207ENST00000581849 AADACL3Q5VUY0 350 aa16.94■□□□□ 0.3
CASC3-207ENST00000581849 CADM3Q8N126 398 aa16.94■□□□□ 0.3
CASC3-207ENST00000581849 SLC25A46Q96AG3 418 aa16.94■□□□□ 0.3
CASC3-207ENST00000581849 EEF1AKMT3Q96AZ1 226 aa16.94■□□□□ 0.3
CASC3-207ENST00000581849 IGLV11-55A0A075B6I3 123 aa16.93■□□□□ 0.3
CASC3-207ENST00000581849 MEIS3P1A6NDR6 274 aa16.93■□□□□ 0.3
CASC3-207ENST00000581849 CGB1A6NKQ9 187 aa16.93■□□□□ 0.3
CASC3-207ENST00000581849 FCER2P06734 321 aa16.93■□□□□ 0.3
CASC3-207ENST00000581849 ADAMTSL5Q6ZMM2 481 aa16.93■□□□□ 0.3
CASC3-207ENST00000581849 OR51H1Q8NH63 302 aa16.93■□□□□ 0.3
CASC3-207ENST00000581849 CXorf58Q96LI9 332 aa16.93■□□□□ 0.3
CASC3-207ENST00000581849 CCDC140Q96MF4 163 aa16.93■□□□□ 0.3
CASC3-207ENST00000581849 CITED4Q96RK1 184 aa16.93■□□□□ 0.3
CASC3-207ENST00000581849 COMMD5Q9GZQ3 224 aa16.93■□□□□ 0.3
CASC3-207ENST00000581849 TECRQ9NZ01 308 aaKnown RBP16.93■□□□□ 0.3
CASC3-207ENST00000581849 C2orf70A6NJV1 201 aa16.92■□□□□ 0.3
CASC3-207ENST00000581849 PPP5D1E7EU14 171 aa16.92■□□□□ 0.3
CASC3-207ENST00000581849 NDUFB8O95169 186 aa16.92■□□□□ 0.3
CASC3-207ENST00000581849 DEFA4P12838 97 aa16.92■□□□□ 0.3
CASC3-207ENST00000581849 PRSS3P35030 304 aa16.92■□□□□ 0.3
CASC3-207ENST00000581849 C19orf35Q6ZS72 473 aa16.92■□□□□ 0.3
CASC3-207ENST00000581849 HSD17B13Q7Z5P4 300 aaPredicted RBP16.92■□□□□ 0.3
CASC3-207ENST00000581849 OR5H2Q8NGV7 314 aa16.92■□□□□ 0.3
CASC3-207ENST00000581849 DYNLRB2Q8TF09 96 aa16.92■□□□□ 0.3
CASC3-207ENST00000581849 SPATA25Q9BR10 227 aa16.92■□□□□ 0.3
CASC3-207ENST00000581849 ZNF2Q9BSG1 426 aaPredicted RBP16.92■□□□□ 0.3
CASC3-207ENST00000581849 TMEM140Q9NV12 185 aa16.92■□□□□ 0.3
CASC3-207ENST00000581849 TRBV7-1A0A0A6YYK4 115 aa16.91■□□□□ 0.3
CASC3-207ENST00000581849 IGLC7A0M8Q6 106 aa16.91■□□□□ 0.3
CASC3-207ENST00000581849 IZUMO1RA6ND01 250 aa16.91■□□□□ 0.3
CASC3-207ENST00000581849 S1PR2O95136 353 aa16.91■□□□□ 0.3
CASC3-207ENST00000581849 F2RP25116 425 aa16.91■□□□□ 0.3
CASC3-207ENST00000581849 ARL3P36405 182 aa16.91■□□□□ 0.3
CASC3-207ENST00000581849 RFX2P48378 723 aa16.91■□□□□ 0.3
CASC3-207ENST00000581849 LSM3P62310 102 aaKnown RBP16.91■□□□□ 0.3
CASC3-207ENST00000581849 CD300EQ496F6 205 aaPredicted RBP16.91■□□□□ 0.3
CASC3-207ENST00000581849 CMTM1Q8IZ96 169 aa16.91■□□□□ 0.3
CASC3-207ENST00000581849 DMBX1Q8NFW5 382 aa16.91■□□□□ 0.3
CASC3-207ENST00000581849 ZC4H2Q9NQZ6 224 aa16.91■□□□□ 0.3
CASC3-207ENST00000581849 THYN1Q9P016 225 aa16.91■□□□□ 0.3
CASC3-207ENST00000581849 A8MWP6 167 aa16.9■□□□□ 0.3
CASC3-207ENST00000581849 CYB5BO43169 146 aa16.9■□□□□ 0.3
CASC3-207ENST00000581849 PGLYRP1O75594 196 aaPredicted RBP16.9■□□□□ 0.3
CASC3-207ENST00000581849 OR2C1O95371 312 aa16.9■□□□□ 0.3
CASC3-207ENST00000581849 APOA1P02647 267 aa16.9■□□□□ 0.3
CASC3-207ENST00000581849 FOLR2P14207 255 aa16.9■□□□□ 0.3
CASC3-207ENST00000581849 MYOD1P15172 320 aa16.9■□□□□ 0.3
CASC3-207ENST00000581849 ERVK-16P61578 105 aa16.9■□□□□ 0.3
CASC3-207ENST00000581849 DEFB114Q30KQ6 69 aa16.9■□□□□ 0.3
CASC3-207ENST00000581849 CLEC19AQ6UXS0 136 aa16.9■□□□□ 0.3
CASC3-207ENST00000581849 OR6F1Q8NGZ6 308 aa16.9■□□□□ 0.3
CASC3-207ENST00000581849 QTRT1Q9BXR0 403 aaKnown RBP16.9■□□□□ 0.3
CASC3-207ENST00000581849 TUBA4BQ9H853 241 aa16.9■□□□□ 0.3
CASC3-207ENST00000581849 SCPEP1Q9HB40 452 aa16.9■□□□□ 0.3
CASC3-207ENST00000581849 SLC2A8Q9NY64 477 aa16.9■□□□□ 0.3
CASC3-207ENST00000581849 HAGHQ16775 308 aa16.89■□□□□ 0.29
CASC3-207ENST00000581849 FAM106AQ4KMX7 169 aa16.89■□□□□ 0.29
CASC3-207ENST00000581849 GPX8Q8TED1 209 aa16.89■□□□□ 0.29
CASC3-207ENST00000581849 FAM212BQ9NTI7 297 aaPredicted RBP16.89■□□□□ 0.29
CASC3-207ENST00000581849 TRAV3A0A0B4J244 114 aa16.88■□□□□ 0.29
CASC3-207ENST00000581849 SMIM31A0A1B0GVY4 71 aa16.88■□□□□ 0.29
CASC3-207ENST00000581849 MARCH11A6NNE9 402 aa16.88■□□□□ 0.29
CASC3-207ENST00000581849 ZNF785A8K8V0 405 aa16.88■□□□□ 0.29
CASC3-207ENST00000581849 HLA-AP01891 365 aaKnown RBP16.88■□□□□ 0.29
CASC3-207ENST00000581849 PMP2P02689 132 aa16.88■□□□□ 0.29
CASC3-207ENST00000581849 RLN1P04808 185 aa16.88■□□□□ 0.29
CASC3-207ENST00000581849 CASC10Q5T4H9 136 aa16.88■□□□□ 0.29
CASC3-207ENST00000581849 DGCR14Q96DF8 476 aaKnown RBP16.88■□□□□ 0.29
CASC3-207ENST00000581849 FUNDC2Q9BWH2 189 aa16.88■□□□□ 0.29
CASC3-207ENST00000581849 GPR31O00270 319 aa16.87■□□□□ 0.29
CASC3-207ENST00000581849 TPPPO94811 219 aa16.87■□□□□ 0.29
CASC3-207ENST00000581849 REG1AP05451 166 aa16.87■□□□□ 0.29
CASC3-207ENST00000581849 EIF4EP06730 217 aaKnown RBP16.87■□□□□ 0.29
CASC3-207ENST00000581849 CBLN1P23435 193 aa16.87■□□□□ 0.29
CASC3-207ENST00000581849 CD81P60033 236 aa16.87■□□□□ 0.29
CASC3-207ENST00000581849 LPCAT3Q6P1A2 487 aa16.87■□□□□ 0.29
CASC3-207ENST00000581849 LINC00322Q6ZN03 302 aaPredicted RBP16.87■□□□□ 0.29
CASC3-207ENST00000581849 LYSMD2Q8IV50 215 aa16.87■□□□□ 0.29
CASC3-207ENST00000581849 OR1L8Q8NGR8 309 aa16.87■□□□□ 0.29
CASC3-207ENST00000581849 NEURL2Q9BR09 285 aa16.87■□□□□ 0.29
CASC3-207ENST00000581849 FXYD6Q9H0Q3 95 aa16.87■□□□□ 0.29
CASC3-207ENST00000581849 EDA2RQ9HAV5 297 aa16.87■□□□□ 0.29
CASC3-207ENST00000581849 MFSD2BA6NFX1 497 aa16.86■□□□□ 0.29
CASC3-207ENST00000581849 IGHV3-23P01764 117 aa16.86■□□□□ 0.29
CASC3-207ENST00000581849 TRAPPC2P0DI81 140 aa16.86■□□□□ 0.29
CASC3-207ENST00000581849 TRAPPC2BP0DI82 140 aa16.86■□□□□ 0.29
CASC3-207ENST00000581849 PTBP1P26599 531 aaKnown RBP eCLIP16.86■□□□□ 0.29
CASC3-207ENST00000581849 HRH1P35367 487 aa16.86■□□□□ 0.29
CASC3-207ENST00000581849 NCS1P62166 190 aa16.86■□□□□ 0.29
CASC3-207ENST00000581849 GDPD1Q8N9F7 314 aa16.86■□□□□ 0.29
CASC3-207ENST00000581849 ZNF502Q8TBZ5 544 aa16.86■□□□□ 0.29
CASC3-207ENST00000581849 VN1R17PQ8TDU5 208 aa16.86■□□□□ 0.29
CASC3-207ENST00000581849 ISOC1Q96CN7 298 aa16.86■□□□□ 0.29
CASC3-207ENST00000581849 ATP6V0BQ99437 205 aa16.86■□□□□ 0.29
CASC3-207ENST00000581849 COMMD3Q9UBI1 195 aa16.86■□□□□ 0.29
CASC3-207ENST00000581849 TMEM213A2RRL7 107 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms