RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 CA2P00918 260 aa8.22□□□□□ -1.09
CCDC47-203ENST00000580986 HLA-GP17693 338 aa8.22□□□□□ -1.09
CCDC47-203ENST00000580986 COMPP49747 757 aaPredicted RBP8.22□□□□□ -1.09
CCDC47-203ENST00000580986 CX3CL1P78423 397 aa8.22□□□□□ -1.09
CCDC47-203ENST00000580986 SSBP2P81877 361 aaPredicted RBP8.22□□□□□ -1.09
CCDC47-203ENST00000580986 TATDN3Q17R31 274 aa8.22□□□□□ -1.09
CCDC47-203ENST00000580986 HSD17B13Q7Z5P4 300 aaPredicted RBP8.22□□□□□ -1.09
CCDC47-203ENST00000580986 SLC35E3Q7Z769 313 aa8.22□□□□□ -1.09
CCDC47-203ENST00000580986 OR2T6Q8NHC8 308 aa8.22□□□□□ -1.09
CCDC47-203ENST00000580986 CASTOR1Q8WTX7 329 aa8.22□□□□□ -1.09
CCDC47-203ENST00000580986 SPIN2AQ99865 258 aa8.22□□□□□ -1.09
CCDC47-203ENST00000580986 SPIN2BQ9BPZ2 258 aa8.22□□□□□ -1.09
CCDC47-203ENST00000580986 GON7Q9BXV9 100 aa8.22□□□□□ -1.09
CCDC47-203ENST00000580986 KRTAP4-8Q9BYQ9 185 aa8.22□□□□□ -1.09
CCDC47-203ENST00000580986 OR51J1Q9H342 316 aa8.22□□□□□ -1.09
CCDC47-203ENST00000580986 JMJD1CQ15652 2540 aa8.22□□□□□ -1.09
CCDC47-203ENST00000580986 FAM90A26D6RGX4 464 aa8.21□□□□□ -1.1
CCDC47-203ENST00000580986 INS-IGF2F8WCM5 200 aa8.21□□□□□ -1.1
CCDC47-203ENST00000580986 FCN1O00602 326 aa8.21□□□□□ -1.1
CCDC47-203ENST00000580986 OR9G9P0C7N8 305 aa8.21□□□□□ -1.1
CCDC47-203ENST00000580986 SPNP16150 400 aa8.21□□□□□ -1.1
CCDC47-203ENST00000580986 FOXL1Q12952 345 aa8.21□□□□□ -1.1
CCDC47-203ENST00000580986 AKIRIN2Q53H80 203 aa8.21□□□□□ -1.1
CCDC47-203ENST00000580986 SSX9Q7RTT3 188 aa8.21□□□□□ -1.1
CCDC47-203ENST00000580986 LYZL2Q7Z4W2 148 aa8.21□□□□□ -1.1
CCDC47-203ENST00000580986 C12orf45Q8N5I9 185 aaPredicted RBP8.21□□□□□ -1.1
CCDC47-203ENST00000580986 OR52E5Q8NH55 327 aa8.21□□□□□ -1.1
CCDC47-203ENST00000580986 SGMS2Q8NHU3 365 aa8.21□□□□□ -1.1
CCDC47-203ENST00000580986 RNASE11Q8TAA1 199 aaKnown RBP8.21□□□□□ -1.1
CCDC47-203ENST00000580986 ARPC1AQ92747 370 aa8.21□□□□□ -1.1
CCDC47-203ENST00000580986 HSPB9Q9BQS6 159 aa8.21□□□□□ -1.1
CCDC47-203ENST00000580986 SEC22CQ9BRL7 303 aa8.21□□□□□ -1.1
CCDC47-203ENST00000580986 WNT10AQ9GZT5 417 aa8.21□□□□□ -1.1
CCDC47-203ENST00000580986 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.21□□□□□ -1.1
CCDC47-203ENST00000580986 SERTAD4Q9NUC0 356 aa8.21□□□□□ -1.1
CCDC47-203ENST00000580986 TNCP24821 2201 aa8.2□□□□□ -1.1
CCDC47-203ENST00000580986 A0A0B4J293 547 aa8.2□□□□□ -1.1
CCDC47-203ENST00000580986 A0A0G2JRQ6 117 aa8.2□□□□□ -1.1
CCDC47-203ENST00000580986 TMEM89A2RUT3 159 aa8.2□□□□□ -1.1
CCDC47-203ENST00000580986 PITX3O75364 302 aa8.2□□□□□ -1.1
CCDC47-203ENST00000580986 BRI3O95415 125 aa8.2□□□□□ -1.1
CCDC47-203ENST00000580986 IFNA21P01568 189 aa8.2□□□□□ -1.1
CCDC47-203ENST00000580986 SULT1A3P0DMM9 295 aa8.2□□□□□ -1.1
CCDC47-203ENST00000580986 SULT1A4P0DMN0 295 aa8.2□□□□□ -1.1
CCDC47-203ENST00000580986 RPL27AP46776 148 aaKnown RBP8.2□□□□□ -1.1
CCDC47-203ENST00000580986 NDPQ00604 133 aa8.2□□□□□ -1.1
CCDC47-203ENST00000580986 TMEM267Q0VDI3 215 aaPredicted RBP8.2□□□□□ -1.1
CCDC47-203ENST00000580986 PJVKQ0ZLH3 352 aa8.2□□□□□ -1.1
CCDC47-203ENST00000580986 SMCO1Q147U7 214 aa8.2□□□□□ -1.1
CCDC47-203ENST00000580986 FXYD3Q14802 87 aa8.2□□□□□ -1.1
CCDC47-203ENST00000580986 KRTAP21-3Q3LHN1 58 aa8.2□□□□□ -1.1
CCDC47-203ENST00000580986 C19orf54Q5BKX5 351 aa8.2□□□□□ -1.1
CCDC47-203ENST00000580986 MRPL41Q8IXM3 137 aaKnown RBP8.2□□□□□ -1.1
CCDC47-203ENST00000580986 OR52B4Q8NGK2 314 aa8.2□□□□□ -1.1
CCDC47-203ENST00000580986 OR1L8Q8NGR8 309 aa8.2□□□□□ -1.1
CCDC47-203ENST00000580986 OR4A16Q8NH70 328 aa8.2□□□□□ -1.1
CCDC47-203ENST00000580986 LINC01006Q8NI28 216 aa8.2□□□□□ -1.1
CCDC47-203ENST00000580986 SRSF12Q8WXF0 261 aaKnown RBP8.2□□□□□ -1.1
CCDC47-203ENST00000580986 TMEM158Q8WZ71 300 aa8.2□□□□□ -1.1
CCDC47-203ENST00000580986 GPR146Q96CH1 333 aa8.2□□□□□ -1.1
CCDC47-203ENST00000580986 RBMXL1Q96E39 390 aaKnown RBP8.2□□□□□ -1.1
CCDC47-203ENST00000580986 COMMD5Q9GZQ3 224 aa8.2□□□□□ -1.1
CCDC47-203ENST00000580986 BEX1Q9HBH7 125 aa8.2□□□□□ -1.1
CCDC47-203ENST00000580986 TRAV3A0A0B4J244 114 aa8.19□□□□□ -1.1
CCDC47-203ENST00000580986 CLPSL1A2RUU4 121 aa8.19□□□□□ -1.1
CCDC47-203ENST00000580986 ATP6V0E1O15342 81 aa8.19□□□□□ -1.1
CCDC47-203ENST00000580986 CNIH1O95406 144 aa8.19□□□□□ -1.1
CCDC47-203ENST00000580986 LY86O95711 162 aa8.19□□□□□ -1.1
CCDC47-203ENST00000580986 EGR2P11161 476 aaPredicted RBP8.19□□□□□ -1.1
CCDC47-203ENST00000580986 VDAC2P45880 294 aaPredicted RBP8.19□□□□□ -1.1
CCDC47-203ENST00000580986 OR2B8PP59922 312 aa8.19□□□□□ -1.1
CCDC47-203ENST00000580986 HSPE1P61604 102 aaKnown RBP8.19□□□□□ -1.1
CCDC47-203ENST00000580986 CFHR3Q02985 330 aa8.19□□□□□ -1.1
CCDC47-203ENST00000580986 TNXAQ16473 311 aa8.19□□□□□ -1.1
CCDC47-203ENST00000580986 KRTAP24-1Q3LI83 254 aa8.19□□□□□ -1.1
CCDC47-203ENST00000580986 GGNBP1Q5YKI7 109 aa8.19□□□□□ -1.1
CCDC47-203ENST00000580986 Q6ZRM9 215 aa8.19□□□□□ -1.1
CCDC47-203ENST00000580986 Q6ZS46 218 aa8.19□□□□□ -1.1
CCDC47-203ENST00000580986 STPG2Q8N412 459 aa8.19□□□□□ -1.1
CCDC47-203ENST00000580986 COMMD1Q8N668 190 aa8.19□□□□□ -1.1
CCDC47-203ENST00000580986 WIPF2Q8TF74 440 aaPredicted RBP8.19□□□□□ -1.1
CCDC47-203ENST00000580986 QTRT1Q9BXR0 403 aaKnown RBP8.19□□□□□ -1.1
CCDC47-203ENST00000580986 NDUFA4L2Q9NRX3 87 aa8.19□□□□□ -1.1
CCDC47-203ENST00000580986 PRR13Q9NZ81 148 aa8.19□□□□□ -1.1
CCDC47-203ENST00000580986 CACNG5Q9UF02 275 aa8.19□□□□□ -1.1
CCDC47-203ENST00000580986 TEX50A0A1B0GTY4 177 aa8.18□□□□□ -1.1
CCDC47-203ENST00000580986 A0A1W2PN81 502 aa8.18□□□□□ -1.1
CCDC47-203ENST00000580986 NPIPB5A8MRT5 1133 aa8.18□□□□□ -1.1
CCDC47-203ENST00000580986 TEX22C9J3V5 150 aa8.18□□□□□ -1.1
CCDC47-203ENST00000580986 H3BUA1 57 aa8.18□□□□□ -1.1
CCDC47-203ENST00000580986 HOXB5P09067 269 aa8.18□□□□□ -1.1
CCDC47-203ENST00000580986 PPIFP30405 207 aaKnown RBP8.18□□□□□ -1.1
CCDC47-203ENST00000580986 CHRNA7P36544 502 aa8.18□□□□□ -1.1
CCDC47-203ENST00000580986 PROK1P58294 105 aa8.18□□□□□ -1.1
CCDC47-203ENST00000580986 SPCS3P61009 180 aa8.18□□□□□ -1.1
CCDC47-203ENST00000580986 PRCDQ00LT1 54 aa8.18□□□□□ -1.1
CCDC47-203ENST00000580986 KLK9Q2XQG4 91 aa8.18□□□□□ -1.1
CCDC47-203ENST00000580986 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.18□□□□□ -1.1
CCDC47-203ENST00000580986 RNF152Q8N8N0 203 aa8.18□□□□□ -1.1
CCDC47-203ENST00000580986 OR5M8Q8NGP6 311 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms