RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 A0A0U1RQK1 487 aa10.39□□□□□ -0.75
CDK5RAP3-217ENST00000580287 A0A1B0GW64 132 aa10.39□□□□□ -0.75
CDK5RAP3-217ENST00000580287 ZNF320A2RRD8 509 aa10.39□□□□□ -0.75
CDK5RAP3-217ENST00000580287 GPR12P47775 334 aa10.39□□□□□ -0.75
CDK5RAP3-217ENST00000580287 FGF8P55075 233 aaPredicted RBP10.39□□□□□ -0.75
CDK5RAP3-217ENST00000580287 SSTP61278 116 aa10.39□□□□□ -0.75
CDK5RAP3-217ENST00000580287 PAX5Q02548 391 aa10.39□□□□□ -0.75
CDK5RAP3-217ENST00000580287 ZNF841Q6ZN19 808 aa10.39□□□□□ -0.75
CDK5RAP3-217ENST00000580287 NEU4Q8WWR8 484 aaPredicted RBP10.39□□□□□ -0.75
CDK5RAP3-217ENST00000580287 PRDM13Q9H4Q3 707 aa10.39□□□□□ -0.75
CDK5RAP3-217ENST00000580287 A0A087X0M5 115 aa10.39□□□□□ -0.75
CDK5RAP3-217ENST00000580287 KBTBD11-OT1A0A1B0GTJ5 212 aa10.39□□□□□ -0.75
CDK5RAP3-217ENST00000580287 A0A1B0GX30 115 aa10.39□□□□□ -0.75
CDK5RAP3-217ENST00000580287 LINC00473A8K010 186 aa10.39□□□□□ -0.75
CDK5RAP3-217ENST00000580287 KRTAP10-9P60411 292 aa10.39□□□□□ -0.75
CDK5RAP3-217ENST00000580287 UBE2KP61086 200 aa10.39□□□□□ -0.75
CDK5RAP3-217ENST00000580287 SPINK9Q5DT21 86 aa10.39□□□□□ -0.75
CDK5RAP3-217ENST00000580287 AKR1C8PQ5T2L2 129 aa10.39□□□□□ -0.75
CDK5RAP3-217ENST00000580287 OR8G2PQ6IF36 304 aa10.39□□□□□ -0.75
CDK5RAP3-217ENST00000580287 ZNF343Q6P1L6 599 aa10.39□□□□□ -0.75
CDK5RAP3-217ENST00000580287 CLN8Q9UBY8 286 aa10.39□□□□□ -0.75
CDK5RAP3-217ENST00000580287 URGCP-MRPS24S4R325 110 aa10.39□□□□□ -0.75
CDK5RAP3-217ENST00000580287 OVOL3O00110 214 aa10.38□□□□□ -0.75
CDK5RAP3-217ENST00000580287 DFFBO76075 338 aa10.38□□□□□ -0.75
CDK5RAP3-217ENST00000580287 IGHV4-39P01824 125 aa10.38□□□□□ -0.75
CDK5RAP3-217ENST00000580287 CXCL1P09341 107 aa10.38□□□□□ -0.75
CDK5RAP3-217ENST00000580287 WNT2P09544 360 aa10.38□□□□□ -0.75
CDK5RAP3-217ENST00000580287 COX6B1P14854 86 aa10.38□□□□□ -0.75
CDK5RAP3-217ENST00000580287 GNG10P50151 68 aa10.38□□□□□ -0.75
CDK5RAP3-217ENST00000580287 MSMO1Q15800 293 aa10.38□□□□□ -0.75
CDK5RAP3-217ENST00000580287 CR1LQ2VPA4 569 aa10.38□□□□□ -0.75
CDK5RAP3-217ENST00000580287 MORN2Q502X0 79 aa10.38□□□□□ -0.75
CDK5RAP3-217ENST00000580287 SPNS3Q6ZMD2 512 aa10.38□□□□□ -0.75
CDK5RAP3-217ENST00000580287 C1orf229Q6ZS94 237 aaPredicted RBP10.38□□□□□ -0.75
CDK5RAP3-217ENST00000580287 CYB561D1Q8N8Q1 229 aa10.38□□□□□ -0.75
CDK5RAP3-217ENST00000580287 LFNGQ8NES3 379 aa10.38□□□□□ -0.75
CDK5RAP3-217ENST00000580287 SCGB1C1Q8TD33 95 aa10.38□□□□□ -0.75
CDK5RAP3-217ENST00000580287 GNPNAT1Q96EK6 184 aaPredicted RBP10.38□□□□□ -0.75
CDK5RAP3-217ENST00000580287 C14orf144Q96I85 54 aa10.38□□□□□ -0.75
CDK5RAP3-217ENST00000580287 CCL19Q99731 98 aa10.38□□□□□ -0.75
CDK5RAP3-217ENST00000580287 HMGB3O15347 200 aaKnown RBP10.38□□□□□ -0.75
CDK5RAP3-217ENST00000580287 HTD2P86397 168 aa10.38□□□□□ -0.75
CDK5RAP3-217ENST00000580287 TLE4Q04727 773 aa10.38□□□□□ -0.75
CDK5RAP3-217ENST00000580287 TRAT1Q6PIZ9 186 aa10.38□□□□□ -0.75
CDK5RAP3-217ENST00000580287 SSX9Q7RTT3 188 aa10.38□□□□□ -0.75
CDK5RAP3-217ENST00000580287 SSX7Q7RTT5 188 aa10.38□□□□□ -0.75
CDK5RAP3-217ENST00000580287 H2BFWTQ7Z2G1 175 aa10.38□□□□□ -0.75
CDK5RAP3-217ENST00000580287 OR10D4PQ8NGN7 298 aa10.38□□□□□ -0.75
CDK5RAP3-217ENST00000580287 Q8WTZ3 238 aa10.38□□□□□ -0.75
CDK5RAP3-217ENST00000580287 RAB39BQ96DA2 213 aa10.38□□□□□ -0.75
CDK5RAP3-217ENST00000580287 AGMATQ9BSE5 352 aa10.38□□□□□ -0.75
CDK5RAP3-217ENST00000580287 RBKSQ9H477 322 aa10.38□□□□□ -0.75
CDK5RAP3-217ENST00000580287 CHODLQ9H9P2 273 aa10.38□□□□□ -0.75
CDK5RAP3-217ENST00000580287 KAAG1Q9UBP8 84 aa10.38□□□□□ -0.75
CDK5RAP3-217ENST00000580287 RBFOX3A6NFN3 312 aa10.37□□□□□ -0.75
CDK5RAP3-217ENST00000580287 H3BQ15 152 aa10.37□□□□□ -0.75
CDK5RAP3-217ENST00000580287 FCGR3BO75015 233 aa10.37□□□□□ -0.75
CDK5RAP3-217ENST00000580287 EFNA4P52798 201 aa10.37□□□□□ -0.75
CDK5RAP3-217ENST00000580287 LCN15Q6UWW0 184 aa10.37□□□□□ -0.75
CDK5RAP3-217ENST00000580287 HAPLN4Q86UW8 402 aa10.37□□□□□ -0.75
CDK5RAP3-217ENST00000580287 GFOD1Q9NXC2 390 aa10.37□□□□□ -0.75
CDK5RAP3-217ENST00000580287 APCP25054 2843 aa10.37□□□□□ -0.75
CDK5RAP3-217ENST00000580287 A0A1B0GV90 55 aa10.37□□□□□ -0.75
CDK5RAP3-217ENST00000580287 hADV38S2A0JD32 116 aa10.37□□□□□ -0.75
CDK5RAP3-217ENST00000580287 J3QKU1 62 aa10.37□□□□□ -0.75
CDK5RAP3-217ENST00000580287 PROP1O75360 226 aa10.37□□□□□ -0.75
CDK5RAP3-217ENST00000580287 DEFA4P12838 97 aa10.37□□□□□ -0.75
CDK5RAP3-217ENST00000580287 BRWD1-AS2P59051 145 aa10.37□□□□□ -0.75
CDK5RAP3-217ENST00000580287 HBG1P69891 147 aa10.37□□□□□ -0.75
CDK5RAP3-217ENST00000580287 HBG2P69892 147 aa10.37□□□□□ -0.75
CDK5RAP3-217ENST00000580287 TNFRSF9Q07011 255 aa10.37□□□□□ -0.75
CDK5RAP3-217ENST00000580287 ELOBQ15370 118 aa10.37□□□□□ -0.75
CDK5RAP3-217ENST00000580287 RPL39P5Q59GN2 51 aa10.37□□□□□ -0.75
CDK5RAP3-217ENST00000580287 RAB1CQ92928 201 aa10.37□□□□□ -0.75
CDK5RAP3-217ENST00000580287 TANC2Q9HCD6 1990 aa10.37□□□□□ -0.75
CDK5RAP3-217ENST00000580287 NAV2Q8IVL1 2488 aa10.37□□□□□ -0.75
CDK5RAP3-217ENST00000580287 M0R1X1 148 aa10.37□□□□□ -0.75
CDK5RAP3-217ENST00000580287 HIST1H2BKO60814 126 aa10.37□□□□□ -0.75
CDK5RAP3-217ENST00000580287 HIST1H2BJP06899 126 aa10.37□□□□□ -0.75
CDK5RAP3-217ENST00000580287 HIST1H2BOP23527 126 aa10.37□□□□□ -0.75
CDK5RAP3-217ENST00000580287 HIST1H2BBP33778 126 aa10.37□□□□□ -0.75
CDK5RAP3-217ENST00000580287 GPR6P46095 362 aaPredicted RBP10.37□□□□□ -0.75
CDK5RAP3-217ENST00000580287 HIST1H2BDP58876 126 aa10.37□□□□□ -0.75
CDK5RAP3-217ENST00000580287 HIST1H2BCP62807 126 aa10.37□□□□□ -0.75
CDK5RAP3-217ENST00000580287 HIST2H2BEQ16778 126 aa10.37□□□□□ -0.75
CDK5RAP3-217ENST00000580287 CT45A1Q5HYN5 189 aa10.37□□□□□ -0.75
CDK5RAP3-217ENST00000580287 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.37□□□□□ -0.75
CDK5RAP3-217ENST00000580287 GFI1BQ5VTD9 330 aa10.37□□□□□ -0.75
CDK5RAP3-217ENST00000580287 NCR3LG1Q68D85 454 aa10.37□□□□□ -0.75
CDK5RAP3-217ENST00000580287 CT45A3Q8NHU0 189 aa10.37□□□□□ -0.75
CDK5RAP3-217ENST00000580287 HIST1H2BHQ93079 126 aa10.37□□□□□ -0.75
CDK5RAP3-217ENST00000580287 HSD17B10Q99714 261 aaKnown RBP10.37□□□□□ -0.75
CDK5RAP3-217ENST00000580287 HIST1H2BNQ99877 126 aa10.37□□□□□ -0.75
CDK5RAP3-217ENST00000580287 HIST1H2BMQ99879 126 aa10.37□□□□□ -0.75
CDK5RAP3-217ENST00000580287 BPESC1Q9GZL8 116 aa10.37□□□□□ -0.75
CDK5RAP3-217ENST00000580287 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.37□□□□□ -0.75
CDK5RAP3-217ENST00000580287 DSCAML1Q8TD84 2053 aa10.36□□□□□ -0.75
CDK5RAP3-217ENST00000580287 TGIF2-C20orf24A0A0A6YYL0 155 aa10.36□□□□□ -0.75
CDK5RAP3-217ENST00000580287 CXorf65A6NEN9 183 aa10.36□□□□□ -0.75
CDK5RAP3-217ENST00000580287 ZFP92A6NM28 416 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms