RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 OR5M8Q8NGP6 311 aa15.03■□□□□ -0
LIMD2-209ENST00000580222 TP53RKQ96S44 253 aa15.03■□□□□ -0
LIMD2-209ENST00000580222 C20orf85Q9H1P6 137 aa15.03■□□□□ -0
LIMD2-209ENST00000580222 FBXL15Q9H469 300 aa15.03■□□□□ -0
LIMD2-209ENST00000580222 PLSCR3Q9NRY6 295 aa15.03■□□□□ -0
LIMD2-209ENST00000580222 COMMD9Q9P000 198 aa15.03■□□□□ -0
LIMD2-209ENST00000580222 METTL1Q9UBP6 276 aaKnown RBP15.03■□□□□ -0
LIMD2-209ENST00000580222 SLC25A17O43808 307 aa15.02■□□□□ -0
LIMD2-209ENST00000580222 LY86O95711 162 aa15.02■□□□□ -0
LIMD2-209ENST00000580222 HRASP01112 189 aa15.02■□□□□ -0
LIMD2-209ENST00000580222 TCRBP04435 133 aa15.02■□□□□ -0
LIMD2-209ENST00000580222 C5orf64Q2M2E5 130 aa15.02■□□□□ -0
LIMD2-209ENST00000580222 FAM71E2Q8N5Q1 922 aa15.02■□□□□ -0
LIMD2-209ENST00000580222 CHPT1Q8WUD6 406 aa15.02■□□□□ -0
LIMD2-209ENST00000580222 PLEKHA2Q9HB19 425 aa15.02■□□□□ -0
LIMD2-209ENST00000580222 FAM212BQ9NTI7 297 aaPredicted RBP15.02■□□□□ -0
LIMD2-209ENST00000580222 FLVCR2Q9UPI3 526 aa15.02■□□□□ -0
LIMD2-209ENST00000580222 B3GALNT1O75752 331 aa15.01□□□□□ -0.01
LIMD2-209ENST00000580222 IGLV2-23P01705 113 aa15.01□□□□□ -0.01
LIMD2-209ENST00000580222 SERPINE2P07093 398 aa15.01□□□□□ -0.01
LIMD2-209ENST00000580222 OR5AC1P0C628 307 aa15.01□□□□□ -0.01
LIMD2-209ENST00000580222 SAA1P0DJI8 122 aaPredicted RBP15.01□□□□□ -0.01
LIMD2-209ENST00000580222 TRIM16LQ309B1 348 aa15.01□□□□□ -0.01
LIMD2-209ENST00000580222 SP6Q3SY56 376 aa15.01□□□□□ -0.01
LIMD2-209ENST00000580222 ZNF585BQ52M93 769 aa15.01□□□□□ -0.01
LIMD2-209ENST00000580222 SSX9Q7RTT3 188 aa15.01□□□□□ -0.01
LIMD2-209ENST00000580222 KCNIP3Q9Y2W7 256 aa15.01□□□□□ -0.01
LIMD2-209ENST00000580222 TRAV6A0A075B6T7 132 aa15□□□□□ -0.01
LIMD2-209ENST00000580222 SRRM4A7MD48 611 aaKnown RBP15□□□□□ -0.01
LIMD2-209ENST00000580222 ANXA3P12429 323 aa15□□□□□ -0.01
LIMD2-209ENST00000580222 NQO2P16083 231 aa15□□□□□ -0.01
LIMD2-209ENST00000580222 VAMP1P23763 118 aa15□□□□□ -0.01
LIMD2-209ENST00000580222 UBE2KP61086 200 aa15□□□□□ -0.01
LIMD2-209ENST00000580222 ERVK-16P61578 105 aa15□□□□□ -0.01
LIMD2-209ENST00000580222 TMEM128Q5BJH2 165 aa15□□□□□ -0.01
LIMD2-209ENST00000580222 VKORC1L1Q8N0U8 176 aa15□□□□□ -0.01
LIMD2-209ENST00000580222 AIFM2Q9BRQ8 373 aa15□□□□□ -0.01
LIMD2-209ENST00000580222 TPSG1Q9NRR2 321 aa15□□□□□ -0.01
LIMD2-209ENST00000580222 NUDT15Q9NV35 164 aa15□□□□□ -0.01
LIMD2-209ENST00000580222 NUBP2Q9Y5Y2 271 aa15□□□□□ -0.01
LIMD2-209ENST00000580222 RPA2P15927 270 aa14.99□□□□□ -0.01
LIMD2-209ENST00000580222 UCP1P25874 307 aa14.99□□□□□ -0.01
LIMD2-209ENST00000580222 DHODHQ02127 395 aa14.99□□□□□ -0.01
LIMD2-209ENST00000580222 NRARPQ7Z6K4 114 aa14.99□□□□□ -0.01
LIMD2-209ENST00000580222 SLC25A42Q86VD7 318 aa14.99□□□□□ -0.01
LIMD2-209ENST00000580222 DMBX1Q8NFW5 382 aa14.99□□□□□ -0.01
LIMD2-209ENST00000580222 VSTM2AQ8TAG5 236 aa14.99□□□□□ -0.01
LIMD2-209ENST00000580222 GALNT14Q96FL9 552 aa14.99□□□□□ -0.01
LIMD2-209ENST00000580222 RHOVQ96L33 236 aa14.99□□□□□ -0.01
LIMD2-209ENST00000580222 CLCC1Q96S66 551 aa14.99□□□□□ -0.01
LIMD2-209ENST00000580222 MARCH11A6NNE9 402 aa14.98□□□□□ -0.01
LIMD2-209ENST00000580222 HLA-DRB1P01911 266 aa14.98□□□□□ -0.01
LIMD2-209ENST00000580222 H2AFB2P0C5Z0 115 aa14.98□□□□□ -0.01
LIMD2-209ENST00000580222 ANXA7P20073 488 aaKnown RBP14.98□□□□□ -0.01
LIMD2-209ENST00000580222 UBE2MP61081 183 aaKnown RBP14.98□□□□□ -0.01
LIMD2-209ENST00000580222 SUPT4H1P63272 117 aaKnown RBP14.98□□□□□ -0.01
LIMD2-209ENST00000580222 LIN54Q6MZP7 749 aa14.98□□□□□ -0.01
LIMD2-209ENST00000580222 STPG2Q8N412 459 aa14.98□□□□□ -0.01
LIMD2-209ENST00000580222 TEX45Q8NA69 505 aa14.98□□□□□ -0.01
LIMD2-209ENST00000580222 TMEM222Q9H0R3 208 aa14.98□□□□□ -0.01
LIMD2-209ENST00000580222 ZMAT4Q9H898 229 aa14.98□□□□□ -0.01
LIMD2-209ENST00000580222 CREBL2O60519 120 aaPredicted RBP14.97□□□□□ -0.01
LIMD2-209ENST00000580222 OR2A4O95047 310 aa14.97□□□□□ -0.01
LIMD2-209ENST00000580222 CA2P00918 260 aa14.97□□□□□ -0.01
LIMD2-209ENST00000580222 KRASP01116 189 aa14.97□□□□□ -0.01
LIMD2-209ENST00000580222 G6PCP35575 357 aa14.97□□□□□ -0.01
LIMD2-209ENST00000580222 AKR1C2P52895 323 aa14.97□□□□□ -0.01
LIMD2-209ENST00000580222 PPP1R1AQ13522 171 aa14.97□□□□□ -0.01
LIMD2-209ENST00000580222 SLC35E3Q7Z769 313 aa14.97□□□□□ -0.01
LIMD2-209ENST00000580222 PPP1R27Q86WC6 154 aa14.97□□□□□ -0.01
LIMD2-209ENST00000580222 RNASE11Q8TAA1 199 aaKnown RBP14.97□□□□□ -0.01
LIMD2-209ENST00000580222 GLYATL2Q8WU03 294 aa14.97□□□□□ -0.01
LIMD2-209ENST00000580222 OR2A7Q96R45 310 aa14.97□□□□□ -0.01
LIMD2-209ENST00000580222 TM2D3Q9BRN9 247 aa14.97□□□□□ -0.01
LIMD2-209ENST00000580222 TMEM140Q9NV12 185 aa14.97□□□□□ -0.01
LIMD2-209ENST00000580222 PRR13Q9NZ81 148 aa14.97□□□□□ -0.01
LIMD2-209ENST00000580222 ATG12O94817 140 aa14.96□□□□□ -0.01
LIMD2-209ENST00000580222 KBTBD11O94819 623 aa14.96□□□□□ -0.01
LIMD2-209ENST00000580222 SFT2D2O95562 160 aa14.96□□□□□ -0.01
LIMD2-209ENST00000580222 IGKV1-39P01597 117 aa14.96□□□□□ -0.01
LIMD2-209ENST00000580222 IGHG2P01859 326 aa14.96□□□□□ -0.01
LIMD2-209ENST00000580222 HLA-AP01891 365 aaKnown RBP14.96□□□□□ -0.01
LIMD2-209ENST00000580222 IGKV1D-39P04432 117 aa14.96□□□□□ -0.01
LIMD2-209ENST00000580222 CRYGBP07316 175 aa14.96□□□□□ -0.01
LIMD2-209ENST00000580222 OR4E1P0C645 316 aa14.96□□□□□ -0.01
LIMD2-209ENST00000580222 GNB1P62873 340 aa14.96□□□□□ -0.01
LIMD2-209ENST00000580222 TMEM187Q14656 261 aa14.96□□□□□ -0.01
LIMD2-209ENST00000580222 POU2AF1Q16633 256 aa14.96□□□□□ -0.01
LIMD2-209ENST00000580222 C4orf46Q504U0 113 aa14.96□□□□□ -0.01
LIMD2-209ENST00000580222 OR4A47Q6IF82 309 aa14.96□□□□□ -0.01
LIMD2-209ENST00000580222 PLET1Q6UQ28 207 aa14.96□□□□□ -0.01
LIMD2-209ENST00000580222 PUSL1Q8N0Z8 303 aaKnown RBP14.96□□□□□ -0.01
LIMD2-209ENST00000580222 COMMD1Q8N668 190 aa14.96□□□□□ -0.01
LIMD2-209ENST00000580222 CASTOR1Q8WTX7 329 aa14.96□□□□□ -0.01
LIMD2-209ENST00000580222 HSPB9Q9BQS6 159 aa14.96□□□□□ -0.01
LIMD2-209ENST00000580222 BET1LQ9NYM9 111 aa14.96□□□□□ -0.01
LIMD2-209ENST00000580222 PTTG1O95997 202 aa14.95□□□□□ -0.02
LIMD2-209ENST00000580222 CDX1P47902 265 aaPredicted RBP14.95□□□□□ -0.02
LIMD2-209ENST00000580222 SLC35B1P78383 322 aa14.95□□□□□ -0.02
LIMD2-209ENST00000580222 SRPXP78539 464 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms