RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 CX3CL1P78423 397 aa8.93□□□□□ -0.98
CDK5RAP3-210ENST00000578733 ANKRD55Q3KP44 614 aa8.93□□□□□ -0.98
CDK5RAP3-210ENST00000578733 HSD17B13Q7Z5P4 300 aaPredicted RBP8.93□□□□□ -0.98
CDK5RAP3-210ENST00000578733 Q8N2B8 174 aa8.93□□□□□ -0.98
CDK5RAP3-210ENST00000578733 UXS1Q8NBZ7 420 aa8.93□□□□□ -0.98
CDK5RAP3-210ENST00000578733 OR52B4Q8NGK2 314 aa8.93□□□□□ -0.98
CDK5RAP3-210ENST00000578733 OR5B3Q8NH48 314 aa8.93□□□□□ -0.98
CDK5RAP3-210ENST00000578733 LHFPL5Q8TAF8 219 aa8.93□□□□□ -0.98
CDK5RAP3-210ENST00000578733 RBMXL1Q96E39 390 aaKnown RBP8.93□□□□□ -0.98
CDK5RAP3-210ENST00000578733 TMEM68Q96MH6 324 aa8.93□□□□□ -0.98
CDK5RAP3-210ENST00000578733 SEC22CQ9BRL7 303 aa8.93□□□□□ -0.98
CDK5RAP3-210ENST00000578733 PARP11Q9NR21 331 aa8.93□□□□□ -0.98
CDK5RAP3-210ENST00000578733 TPSG1Q9NRR2 321 aa8.93□□□□□ -0.98
CDK5RAP3-210ENST00000578733 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.93□□□□□ -0.98
CDK5RAP3-210ENST00000578733 COA4Q9NYJ1 87 aa8.93□□□□□ -0.98
CDK5RAP3-210ENST00000578733 PRR13Q9NZ81 148 aa8.93□□□□□ -0.98
CDK5RAP3-210ENST00000578733 ZNF580Q9UK33 172 aa8.93□□□□□ -0.98
CDK5RAP3-210ENST00000578733 ZNF257Q9Y2Q1 563 aa8.93□□□□□ -0.98
CDK5RAP3-210ENST00000578733 OR51B2Q9Y5P1 312 aa8.93□□□□□ -0.98
CDK5RAP3-210ENST00000578733 IGHV7-81A0A0B4J1V7 117 aa8.92□□□□□ -0.98
CDK5RAP3-210ENST00000578733 A0A1B0GU03 582 aa8.92□□□□□ -0.98
CDK5RAP3-210ENST00000578733 CLPSL1A2RUU4 121 aa8.92□□□□□ -0.98
CDK5RAP3-210ENST00000578733 SH2D7A6NKC9 451 aaPredicted RBP8.92□□□□□ -0.98
CDK5RAP3-210ENST00000578733 IL6RP08887 468 aaPredicted RBP8.92□□□□□ -0.98
CDK5RAP3-210ENST00000578733 SLC25A6P12236 298 aa8.92□□□□□ -0.98
CDK5RAP3-210ENST00000578733 RELBQ01201 579 aa8.92□□□□□ -0.98
CDK5RAP3-210ENST00000578733 SMCO1Q147U7 214 aa8.92□□□□□ -0.98
CDK5RAP3-210ENST00000578733 TATDN3Q17R31 274 aa8.92□□□□□ -0.98
CDK5RAP3-210ENST00000578733 LYZL2Q7Z4W2 148 aa8.92□□□□□ -0.98
CDK5RAP3-210ENST00000578733 ZNF429Q86V71 674 aa8.92□□□□□ -0.98
CDK5RAP3-210ENST00000578733 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.92□□□□□ -0.98
CDK5RAP3-210ENST00000578733 OR1L8Q8NGR8 309 aa8.92□□□□□ -0.98
CDK5RAP3-210ENST00000578733 OR1S1Q8NH92 325 aa8.92□□□□□ -0.98
CDK5RAP3-210ENST00000578733 SGMS2Q8NHU3 365 aa8.92□□□□□ -0.98
CDK5RAP3-210ENST00000578733 GRPEL2Q8TAA5 225 aa8.92□□□□□ -0.98
CDK5RAP3-210ENST00000578733 SRSF12Q8WXF0 261 aaKnown RBP8.92□□□□□ -0.98
CDK5RAP3-210ENST00000578733 SRSF8Q9BRL6 282 aaKnown RBP8.92□□□□□ -0.98
CDK5RAP3-210ENST00000578733 QTRT1Q9BXR0 403 aaKnown RBP8.92□□□□□ -0.98
CDK5RAP3-210ENST00000578733 ENY2Q9NPA8 101 aa8.92□□□□□ -0.98
CDK5RAP3-210ENST00000578733 FOXA2Q9Y261 457 aaPredicted RBP8.92□□□□□ -0.98
CDK5RAP3-210ENST00000578733 A0A1W2PN81 502 aa8.91□□□□□ -0.98
CDK5RAP3-210ENST00000578733 FCN1O00602 326 aa8.91□□□□□ -0.98
CDK5RAP3-210ENST00000578733 ATP6V0E1O15342 81 aa8.91□□□□□ -0.98
CDK5RAP3-210ENST00000578733 CYB5BO43169 146 aa8.91□□□□□ -0.98
CDK5RAP3-210ENST00000578733 IFNA17P01571 189 aa8.91□□□□□ -0.98
CDK5RAP3-210ENST00000578733 IGF1P05019 195 aa8.91□□□□□ -0.98
CDK5RAP3-210ENST00000578733 OR9G9P0C7N8 305 aa8.91□□□□□ -0.98
CDK5RAP3-210ENST00000578733 TRAPPC2P0DI81 140 aa8.91□□□□□ -0.98
CDK5RAP3-210ENST00000578733 TRAPPC2BP0DI82 140 aa8.91□□□□□ -0.98
CDK5RAP3-210ENST00000578733 CHRNA7P36544 502 aa8.91□□□□□ -0.98
CDK5RAP3-210ENST00000578733 OR2B8PP59922 312 aa8.91□□□□□ -0.98
CDK5RAP3-210ENST00000578733 SRSF2Q01130 221 aaKnown RBP8.91□□□□□ -0.98
CDK5RAP3-210ENST00000578733 ECSCRQ19T08 205 aa8.91□□□□□ -0.98
CDK5RAP3-210ENST00000578733 KRTAP24-1Q3LI83 254 aa8.91□□□□□ -0.98
CDK5RAP3-210ENST00000578733 NMSQ5H8A3 153 aa8.91□□□□□ -0.98
CDK5RAP3-210ENST00000578733 GGNBP1Q5YKI7 109 aa8.91□□□□□ -0.98
CDK5RAP3-210ENST00000578733 CENPVQ7Z7K6 275 aaPredicted RBP8.91□□□□□ -0.98
CDK5RAP3-210ENST00000578733 OR52E5Q8NH55 327 aa8.91□□□□□ -0.98
CDK5RAP3-210ENST00000578733 GPR146Q96CH1 333 aa8.91□□□□□ -0.98
CDK5RAP3-210ENST00000578733 FYTTD1Q96QD9 318 aaKnown RBP8.91□□□□□ -0.98
CDK5RAP3-210ENST00000578733 HSPB9Q9BQS6 159 aa8.91□□□□□ -0.98
CDK5RAP3-210ENST00000578733 TMEM14BQ9NUH8 114 aa8.91□□□□□ -0.98
CDK5RAP3-210ENST00000578733 CACNG5Q9UF02 275 aa8.91□□□□□ -0.98
CDK5RAP3-210ENST00000578733 RNF114Q9Y508 228 aa8.91□□□□□ -0.98
CDK5RAP3-210ENST00000578733 TRAV3A0A0B4J244 114 aa8.9□□□□□ -0.98
CDK5RAP3-210ENST00000578733 TRAV41A0A0B4J266 112 aa8.9□□□□□ -0.98
CDK5RAP3-210ENST00000578733 TEX50A0A1B0GTY4 177 aa8.9□□□□□ -0.98
CDK5RAP3-210ENST00000578733 C7orf66A4D0T2 115 aa8.9□□□□□ -0.98
CDK5RAP3-210ENST00000578733 C5orf51A6NDU8 294 aa8.9□□□□□ -0.98
CDK5RAP3-210ENST00000578733 FAM25EA8MYX2 175 aa8.9□□□□□ -0.98
CDK5RAP3-210ENST00000578733 WIPF1O43516 503 aa8.9□□□□□ -0.98
CDK5RAP3-210ENST00000578733 MED6O75586 246 aa8.9□□□□□ -0.98
CDK5RAP3-210ENST00000578733 P0C879 139 aa8.9□□□□□ -0.98
CDK5RAP3-210ENST00000578733 HSPE1P61604 102 aaKnown RBP8.9□□□□□ -0.98
CDK5RAP3-210ENST00000578733 PJVKQ0ZLH3 352 aa8.9□□□□□ -0.98
CDK5RAP3-210ENST00000578733 AKIRIN2Q53H80 203 aa8.9□□□□□ -0.98
CDK5RAP3-210ENST00000578733 UNQ5815/PRO19632Q6UWF5 114 aa8.9□□□□□ -0.98
CDK5RAP3-210ENST00000578733 GSG1LQ6UXU4 331 aa8.9□□□□□ -0.98
CDK5RAP3-210ENST00000578733 STPG2Q8N412 459 aa8.9□□□□□ -0.98
CDK5RAP3-210ENST00000578733 COMMD1Q8N668 190 aa8.9□□□□□ -0.98
CDK5RAP3-210ENST00000578733 LINC01006Q8NI28 216 aa8.9□□□□□ -0.98
CDK5RAP3-210ENST00000578733 C19orf24Q9BVV8 132 aa8.9□□□□□ -0.98
CDK5RAP3-210ENST00000578733 HINT2Q9BX68 163 aa8.9□□□□□ -0.98
CDK5RAP3-210ENST00000578733 PLEKHA3Q9HB20 300 aa8.9□□□□□ -0.98
CDK5RAP3-210ENST00000578733 NSG2Q9Y328 171 aa8.9□□□□□ -0.98
CDK5RAP3-210ENST00000578733 ALG5Q9Y673 324 aa8.9□□□□□ -0.98
CDK5RAP3-210ENST00000578733 A0A0B4J293 547 aa8.89□□□□□ -0.99
CDK5RAP3-210ENST00000578733 C13orf42A0A1B0GVH6 325 aa8.89□□□□□ -0.99
CDK5RAP3-210ENST00000578733 TMEM89A2RUT3 159 aa8.89□□□□□ -0.99
CDK5RAP3-210ENST00000578733 PSMB11A5LHX3 300 aa8.89□□□□□ -0.99
CDK5RAP3-210ENST00000578733 MSGN1A6NI15 193 aa8.89□□□□□ -0.99
CDK5RAP3-210ENST00000578733 DBX1A6NMT0 343 aa8.89□□□□□ -0.99
CDK5RAP3-210ENST00000578733 FAM90A26D6RGX4 464 aa8.89□□□□□ -0.99
CDK5RAP3-210ENST00000578733 WRBO00258 174 aa8.89□□□□□ -0.99
CDK5RAP3-210ENST00000578733 GOSR2O14653 212 aa8.89□□□□□ -0.99
CDK5RAP3-210ENST00000578733 ADAP1O75689 374 aa8.89□□□□□ -0.99
CDK5RAP3-210ENST00000578733 LY86O95711 162 aa8.89□□□□□ -0.99
CDK5RAP3-210ENST00000578733 OPN1MWP04001 364 aa8.89□□□□□ -0.99
CDK5RAP3-210ENST00000578733 OPN1MW2P0DN77 364 aa8.89□□□□□ -0.99
CDK5RAP3-210ENST00000578733 OPN1MW3P0DN78 364 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms