RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 FAM103A1Q9BTL3 118 aaKnown RBP8.63□□□□□ -1.03
CHD3-216ENST00000573936 KCNIP3Q9Y2W7 256 aa8.63□□□□□ -1.03
CHD3-216ENST00000573936 FBXO7Q9Y3I1 522 aa8.63□□□□□ -1.03
CHD3-216ENST00000573936 TEX13DA0A0J9YY54 714 aaPredicted RBP8.62□□□□□ -1.03
CHD3-216ENST00000573936 A0A1W2PRX2 142 aa8.62□□□□□ -1.03
CHD3-216ENST00000573936 MSGN1A6NI15 193 aa8.62□□□□□ -1.03
CHD3-216ENST00000573936 ADARB2-AS1A8MUL3 147 aa8.62□□□□□ -1.03
CHD3-216ENST00000573936 SNAPC5O75971 98 aa8.62□□□□□ -1.03
CHD3-216ENST00000573936 KRASP01116 189 aa8.62□□□□□ -1.03
CHD3-216ENST00000573936 RPLP1P05386 114 aaKnown RBP8.62□□□□□ -1.03
CHD3-216ENST00000573936 IL6RP08887 468 aaPredicted RBP8.62□□□□□ -1.03
CHD3-216ENST00000573936 PF4V1P10720 104 aa8.62□□□□□ -1.03
CHD3-216ENST00000573936 HLA-GP17693 338 aa8.62□□□□□ -1.03
CHD3-216ENST00000573936 RPL27AP46776 148 aaKnown RBP8.62□□□□□ -1.03
CHD3-216ENST00000573936 CDX1P47902 265 aaPredicted RBP8.62□□□□□ -1.03
CHD3-216ENST00000573936 RAB9AP51151 201 aa8.62□□□□□ -1.03
CHD3-216ENST00000573936 SSBP2P81877 361 aaPredicted RBP8.62□□□□□ -1.03
CHD3-216ENST00000573936 DHODHQ02127 395 aa8.62□□□□□ -1.03
CHD3-216ENST00000573936 SGPP2Q8IWX5 399 aa8.62□□□□□ -1.03
CHD3-216ENST00000573936 C5orf66Q9H5L9 145 aa8.62□□□□□ -1.03
CHD3-216ENST00000573936 SLA2Q9H6Q3 261 aa8.62□□□□□ -1.03
CHD3-216ENST00000573936 TMEM140Q9NV12 185 aa8.62□□□□□ -1.03
CHD3-216ENST00000573936 FKBP11Q9NYL4 201 aa8.62□□□□□ -1.03
CHD3-216ENST00000573936 NBEAL2Q6ZNJ1 2754 aa8.62□□□□□ -1.03
CHD3-216ENST00000573936 TET2Q6N021 2002 aaPredicted RBP8.61□□□□□ -1.03
CHD3-216ENST00000573936 PIGBOS1A0A0B4J2F0 54 aa8.61□□□□□ -1.03
CHD3-216ENST00000573936 FAM240BA0A1B0GVZ2 78 aa8.61□□□□□ -1.03
CHD3-216ENST00000573936 NUDT19A8MXV4 375 aa8.61□□□□□ -1.03
CHD3-216ENST00000573936 NDUFB6O95139 128 aa8.61□□□□□ -1.03
CHD3-216ENST00000573936 BRI3O95415 125 aa8.61□□□□□ -1.03
CHD3-216ENST00000573936 SPNP16150 400 aa8.61□□□□□ -1.03
CHD3-216ENST00000573936 G6PCP35575 357 aa8.61□□□□□ -1.03
CHD3-216ENST00000573936 RBMS2Q15434 407 aaKnown RBP8.61□□□□□ -1.03
CHD3-216ENST00000573936 TRIM16LQ309B1 348 aa8.61□□□□□ -1.03
CHD3-216ENST00000573936 THOC7Q6I9Y2 204 aaKnown RBP8.61□□□□□ -1.03
CHD3-216ENST00000573936 H2BFWTQ7Z2G1 175 aa8.61□□□□□ -1.03
CHD3-216ENST00000573936 NRARPQ7Z6K4 114 aa8.61□□□□□ -1.03
CHD3-216ENST00000573936 ZNF695Q8IW36 515 aa8.61□□□□□ -1.03
CHD3-216ENST00000573936 OR5T1Q8NG75 326 aa8.61□□□□□ -1.03
CHD3-216ENST00000573936 FAM110DQ8TAY7 271 aaPredicted RBP8.61□□□□□ -1.03
CHD3-216ENST00000573936 UBE2E2Q96LR5 201 aa8.61□□□□□ -1.03
CHD3-216ENST00000573936 TP53RKQ96S44 253 aa8.61□□□□□ -1.03
CHD3-216ENST00000573936 COMMD5Q9GZQ3 224 aa8.61□□□□□ -1.03
CHD3-216ENST00000573936 NAA60Q9H7X0 242 aa8.61□□□□□ -1.03
CHD3-216ENST00000573936 ZNF355PQ9NSJ1 428 aa8.61□□□□□ -1.03
CHD3-216ENST00000573936 VSIG4Q9Y279 399 aa8.61□□□□□ -1.03
CHD3-216ENST00000573936 CRYM-AS1A6NIL9 109 aa8.6□□□□□ -1.03
CHD3-216ENST00000573936 TSPAN15O95858 294 aa8.6□□□□□ -1.03
CHD3-216ENST00000573936 PTTG1O95997 202 aa8.6□□□□□ -1.03
CHD3-216ENST00000573936 PF4P02776 101 aa8.6□□□□□ -1.03
CHD3-216ENST00000573936 TCRBP04435 133 aa8.6□□□□□ -1.03
CHD3-216ENST00000573936 OR9G9P0C7N8 305 aa8.6□□□□□ -1.03
CHD3-216ENST00000573936 UCP1P25874 307 aa8.6□□□□□ -1.03
CHD3-216ENST00000573936 RGS21Q2M5E4 152 aa8.6□□□□□ -1.03
CHD3-216ENST00000573936 C1QL4Q86Z23 238 aa8.6□□□□□ -1.03
CHD3-216ENST00000573936 TTC9CQ8N5M4 171 aa8.6□□□□□ -1.03
CHD3-216ENST00000573936 ZNF491Q8N8L2 437 aa8.6□□□□□ -1.03
CHD3-216ENST00000573936 KLHL30-AS1Q8NEE0 82 aa8.6□□□□□ -1.03
CHD3-216ENST00000573936 DUSP18Q8NEJ0 188 aa8.6□□□□□ -1.03
CHD3-216ENST00000573936 ENKURQ8TC29 256 aa8.6□□□□□ -1.03
CHD3-216ENST00000573936 MYOZ3Q8TDC0 251 aa8.6□□□□□ -1.03
CHD3-216ENST00000573936 SEC22AQ96IW7 307 aa8.6□□□□□ -1.03
CHD3-216ENST00000573936 FYTTD1Q96QD9 318 aaKnown RBP8.6□□□□□ -1.03
CHD3-216ENST00000573936 SRSF8Q9BRL6 282 aaKnown RBP8.6□□□□□ -1.03
CHD3-216ENST00000573936 PRNDQ9UKY0 176 aa8.6□□□□□ -1.03
CHD3-216ENST00000573936 DNAH3Q8TD57 4116 aa8.6□□□□□ -1.03
CHD3-216ENST00000573936 A0A0G2JLM5 398 aa8.59□□□□□ -1.03
CHD3-216ENST00000573936 SOX15O60248 233 aa8.59□□□□□ -1.03
CHD3-216ENST00000573936 DHFRP00374 187 aa8.59□□□□□ -1.03
CHD3-216ENST00000573936 IGKV1-39P01597 117 aa8.59□□□□□ -1.03
CHD3-216ENST00000573936 TRGV3P03979 118 aa8.59□□□□□ -1.03
CHD3-216ENST00000573936 IGKV1D-39P04432 117 aa8.59□□□□□ -1.03
CHD3-216ENST00000573936 OR5AC1P0C628 307 aa8.59□□□□□ -1.03
CHD3-216ENST00000573936 ANXA3P12429 323 aa8.59□□□□□ -1.03
CHD3-216ENST00000573936 MYCNOSP40205 109 aa8.59□□□□□ -1.03
CHD3-216ENST00000573936 TPPP2P59282 170 aa8.59□□□□□ -1.03
CHD3-216ENST00000573936 SP6Q3SY56 376 aa8.59□□□□□ -1.03
CHD3-216ENST00000573936 ASPHD1Q5U4P2 390 aa8.59□□□□□ -1.03
CHD3-216ENST00000573936 LCNL1Q6ZST4 164 aa8.59□□□□□ -1.03
CHD3-216ENST00000573936 HSD17B13Q7Z5P4 300 aaPredicted RBP8.59□□□□□ -1.03
CHD3-216ENST00000573936 FAM219AQ8IW50 185 aa8.59□□□□□ -1.03
CHD3-216ENST00000573936 OR1L8Q8NGR8 309 aa8.59□□□□□ -1.03
CHD3-216ENST00000573936 OR4A16Q8NH70 328 aa8.59□□□□□ -1.03
CHD3-216ENST00000573936 C4orf3Q8WVX3 66 aa8.59□□□□□ -1.03
CHD3-216ENST00000573936 RRNAD1Q96FB5 475 aaKnown RBP8.59□□□□□ -1.03
CHD3-216ENST00000573936 GALNT14Q96FL9 552 aa8.59□□□□□ -1.03
CHD3-216ENST00000573936 TMEM222Q9H0R3 208 aa8.59□□□□□ -1.03
CHD3-216ENST00000573936 C20orf85Q9H1P6 137 aa8.59□□□□□ -1.03
CHD3-216ENST00000573936 KLK15Q9H2R5 256 aa8.59□□□□□ -1.03
CHD3-216ENST00000573936 NUDT15Q9NV35 164 aa8.59□□□□□ -1.03
CHD3-216ENST00000573936 COA4Q9NYJ1 87 aa8.59□□□□□ -1.03
CHD3-216ENST00000573936 FLVCR2Q9UPI3 526 aa8.59□□□□□ -1.03
CHD3-216ENST00000573936 OR51B2Q9Y5P1 312 aa8.59□□□□□ -1.03
CHD3-216ENST00000573936 TRAV6A0A075B6T7 132 aa8.58□□□□□ -1.04
CHD3-216ENST00000573936 TRAV3A0A0B4J244 114 aa8.58□□□□□ -1.04
CHD3-216ENST00000573936 TEX50A0A1B0GTY4 177 aa8.58□□□□□ -1.04
CHD3-216ENST00000573936 C13orf42A0A1B0GVH6 325 aa8.58□□□□□ -1.04
CHD3-216ENST00000573936 NPIPB5A8MRT5 1133 aa8.58□□□□□ -1.04
CHD3-216ENST00000573936 TEX22C9J3V5 150 aa8.58□□□□□ -1.04
CHD3-216ENST00000573936 CYB5BO43169 146 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms