RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 FGF2P09038 288 aa13.21□□□□□ -0.29
SMG6-214ENST00000573827 IGHV4-30-4P0DP06 118 aa13.21□□□□□ -0.29
SMG6-214ENST00000573827 OR51H1Q8NH63 302 aa13.21□□□□□ -0.29
SMG6-214ENST00000573827 CMTM3Q96MX0 182 aa13.21□□□□□ -0.29
SMG6-214ENST00000573827 NAA50Q9GZZ1 169 aaKnown RBP13.21□□□□□ -0.29
SMG6-214ENST00000573827 PLEKHA2Q9HB19 425 aa13.21□□□□□ -0.29
SMG6-214ENST00000573827 IFT46Q9NQC8 304 aa13.21□□□□□ -0.29
SMG6-214ENST00000573827 PPP5D1E7EU14 171 aa13.2□□□□□ -0.3
SMG6-214ENST00000573827 PGLYRP1O75594 196 aaPredicted RBP13.2□□□□□ -0.3
SMG6-214ENST00000573827 APOA1P02647 267 aa13.2□□□□□ -0.3
SMG6-214ENST00000573827 NQO2P16083 231 aa13.2□□□□□ -0.3
SMG6-214ENST00000573827 EDN2P20800 178 aa13.2□□□□□ -0.3
SMG6-214ENST00000573827 PRSS3P35030 304 aa13.2□□□□□ -0.3
SMG6-214ENST00000573827 CATR1Q13166 79 aa13.2□□□□□ -0.3
SMG6-214ENST00000573827 CTF1Q16619 201 aa13.2□□□□□ -0.3
SMG6-214ENST00000573827 ZNF585BQ52M93 769 aa13.2□□□□□ -0.3
SMG6-214ENST00000573827 ZNF2Q9BSG1 426 aaPredicted RBP13.2□□□□□ -0.3
SMG6-214ENST00000573827 TMEM140Q9NV12 185 aa13.2□□□□□ -0.3
SMG6-214ENST00000573827 COMMD9Q9P000 198 aa13.2□□□□□ -0.3
SMG6-214ENST00000573827 FBXL7Q9UJT9 491 aa13.2□□□□□ -0.3
SMG6-214ENST00000573827 HLA-AP01891 365 aaKnown RBP13.19□□□□□ -0.3
SMG6-214ENST00000573827 ELK1P19419 428 aa13.19□□□□□ -0.3
SMG6-214ENST00000573827 HRH1P35367 487 aa13.19□□□□□ -0.3
SMG6-214ENST00000573827 TAS2R46P59540 309 aa13.19□□□□□ -0.3
SMG6-214ENST00000573827 HERV-K104P61576 105 aa13.19□□□□□ -0.3
SMG6-214ENST00000573827 AADACL3Q5VUY0 350 aa13.19□□□□□ -0.3
SMG6-214ENST00000573827 CADM3Q8N126 398 aa13.19□□□□□ -0.3
SMG6-214ENST00000573827 CD300LFQ8TDQ1 290 aa13.19□□□□□ -0.3
SMG6-214ENST00000573827 RCHY1Q96PM5 261 aa13.19□□□□□ -0.3
SMG6-214ENST00000573827 TM2D3Q9BRN9 247 aa13.19□□□□□ -0.3
SMG6-214ENST00000573827 COMMD3Q9UBI1 195 aa13.19□□□□□ -0.3
SMG6-214ENST00000573827 H0Y980 276 aa13.18□□□□□ -0.3
SMG6-214ENST00000573827 GABARAPO95166 117 aa13.18□□□□□ -0.3
SMG6-214ENST00000573827 RLN1P04808 185 aa13.18□□□□□ -0.3
SMG6-214ENST00000573827 REG1AP05451 166 aa13.18□□□□□ -0.3
SMG6-214ENST00000573827 F2RP25116 425 aa13.18□□□□□ -0.3
SMG6-214ENST00000573827 OR5H2Q8NGV7 314 aa13.18□□□□□ -0.3
SMG6-214ENST00000573827 AIFM2Q9BRQ8 373 aa13.18□□□□□ -0.3
SMG6-214ENST00000573827 SCPEP1Q9HB40 452 aa13.18□□□□□ -0.3
SMG6-214ENST00000573827 S4R3C0 116 aa13.18□□□□□ -0.3
SMG6-214ENST00000573827 MFSD2BA6NFX1 497 aa13.17□□□□□ -0.3
SMG6-214ENST00000573827 ZNF785A8K8V0 405 aa13.17□□□□□ -0.3
SMG6-214ENST00000573827 HPGDSO60760 199 aa13.17□□□□□ -0.3
SMG6-214ENST00000573827 OR2C1O95371 312 aa13.17□□□□□ -0.3
SMG6-214ENST00000573827 IGHV3-23P01764 117 aa13.17□□□□□ -0.3
SMG6-214ENST00000573827 HLA-DMAP28067 261 aa13.17□□□□□ -0.3
SMG6-214ENST00000573827 TATDN3Q17R31 274 aa13.17□□□□□ -0.3
SMG6-214ENST00000573827 FAM209BQ5JX69 171 aa13.17□□□□□ -0.3
SMG6-214ENST00000573827 GPHB5Q86YW7 130 aa13.17□□□□□ -0.3
SMG6-214ENST00000573827 Q8N402 240 aa13.17□□□□□ -0.3
SMG6-214ENST00000573827 FCAMRQ8WWV6 532 aa13.17□□□□□ -0.3
SMG6-214ENST00000573827 SRSF8Q9BRL6 282 aaKnown RBP13.17□□□□□ -0.3
SMG6-214ENST00000573827 HRASLSQ9HDD0 168 aa13.17□□□□□ -0.3
SMG6-214ENST00000573827 DPPA5A6NC42 116 aa13.16□□□□□ -0.3
SMG6-214ENST00000573827 C2orf70A6NJV1 201 aa13.16□□□□□ -0.3
SMG6-214ENST00000573827 MARCH11A6NNE9 402 aa13.16□□□□□ -0.3
SMG6-214ENST00000573827 LGALS9O00182 355 aa13.16□□□□□ -0.3
SMG6-214ENST00000573827 GGCTO75223 188 aaKnown RBP13.16□□□□□ -0.3
SMG6-214ENST00000573827 RPA2P15927 270 aa13.16□□□□□ -0.3
SMG6-214ENST00000573827 WT1-ASQ06250 92 aa13.16□□□□□ -0.3
SMG6-214ENST00000573827 CD300EQ496F6 205 aaPredicted RBP13.16□□□□□ -0.3
SMG6-214ENST00000573827 OR10W1Q8NGF6 305 aa13.16□□□□□ -0.3
SMG6-214ENST00000573827 OR2K2Q8NGT1 345 aa13.16□□□□□ -0.3
SMG6-214ENST00000573827 BORCS5Q969J3 196 aa13.16□□□□□ -0.3
SMG6-214ENST00000573827 DGCR14Q96DF8 476 aaKnown RBP13.16□□□□□ -0.3
SMG6-214ENST00000573827 ZC4H2Q9NQZ6 224 aa13.16□□□□□ -0.3
SMG6-214ENST00000573827 PEMTQ9UBM1 199 aa13.16□□□□□ -0.3
SMG6-214ENST00000573827 TEX50A0A1B0GTY4 177 aa13.15□□□□□ -0.3
SMG6-214ENST00000573827 TMEM213A2RRL7 107 aa13.15□□□□□ -0.3
SMG6-214ENST00000573827 GPR31O00270 319 aa13.15□□□□□ -0.3
SMG6-214ENST00000573827 HIST1H1BP16401 226 aaKnown RBP13.15□□□□□ -0.3
SMG6-214ENST00000573827 LPAR6P43657 344 aa13.15□□□□□ -0.3
SMG6-214ENST00000573827 MFAP2P55001 183 aa13.15□□□□□ -0.3
SMG6-214ENST00000573827 DEFB114Q30KQ6 69 aa13.15□□□□□ -0.3
SMG6-214ENST00000573827 LCN12Q6JVE5 192 aa13.15□□□□□ -0.3
SMG6-214ENST00000573827 CLEC19AQ6UXS0 136 aa13.15□□□□□ -0.3
SMG6-214ENST00000573827 LINC00322Q6ZN03 302 aaPredicted RBP13.15□□□□□ -0.3
SMG6-214ENST00000573827 SNX29P2Q8IUI4 249 aa13.15□□□□□ -0.3
SMG6-214ENST00000573827 OR6F1Q8NGZ6 308 aa13.15□□□□□ -0.3
SMG6-214ENST00000573827 ZNF502Q8TBZ5 544 aa13.15□□□□□ -0.3
SMG6-214ENST00000573827 QTRT1Q9BXR0 403 aaKnown RBP13.15□□□□□ -0.3
SMG6-214ENST00000573827 NDUFA4L2Q9NRX3 87 aa13.15□□□□□ -0.3
SMG6-214ENST00000573827 DBX1A6NMT0 343 aa13.14□□□□□ -0.31
SMG6-214ENST00000573827 A8MWP6 167 aa13.14□□□□□ -0.31
SMG6-214ENST00000573827 DHFRP00374 187 aa13.14□□□□□ -0.31
SMG6-214ENST00000573827 FOLR2P14207 255 aa13.14□□□□□ -0.31
SMG6-214ENST00000573827 ARL3P36405 182 aa13.14□□□□□ -0.31
SMG6-214ENST00000573827 RORCP51449 518 aa13.14□□□□□ -0.31
SMG6-214ENST00000573827 SGPP2Q8IWX5 399 aa13.14□□□□□ -0.31
SMG6-214ENST00000573827 DMBX1Q8NFW5 382 aa13.14□□□□□ -0.31
SMG6-214ENST00000573827 EEF1AKMT3Q96AZ1 226 aa13.14□□□□□ -0.31
SMG6-214ENST00000573827 COMMD5Q9GZQ3 224 aa13.14□□□□□ -0.31
SMG6-214ENST00000573827 IGKV1-39P01597 117 aa13.13□□□□□ -0.31
SMG6-214ENST00000573827 IGKV1D-39P04432 117 aa13.13□□□□□ -0.31
SMG6-214ENST00000573827 RCVRNP35243 200 aa13.13□□□□□ -0.31
SMG6-214ENST00000573827 ALDH3B2P48448 385 aa13.13□□□□□ -0.31
SMG6-214ENST00000573827 UCP3P55916 312 aa13.13□□□□□ -0.31
SMG6-214ENST00000573827 CMTM1Q8IZ96 169 aa13.13□□□□□ -0.31
SMG6-214ENST00000573827 GDPD1Q8N9F7 314 aa13.13□□□□□ -0.31
SMG6-214ENST00000573827 CACNG8Q8WXS5 425 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms