RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 APELAP0DMC3 54 aa11.46□□□□□ -0.58
TVP23A-207ENST00000573360 ZNF709Q8N972 641 aa11.46□□□□□ -0.58
TVP23A-207ENST00000573360 EDARADDQ8WWZ3 215 aa11.46□□□□□ -0.58
TVP23A-207ENST00000573360 PERPQ96FX8 193 aa11.46□□□□□ -0.58
TVP23A-207ENST00000573360 PRO1933Q9H354 126 aa11.46□□□□□ -0.58
TVP23A-207ENST00000573360 CLDN34H7C241 214 aa11.45□□□□□ -0.58
TVP23A-207ENST00000573360 IGHV2-5P01817 119 aa11.45□□□□□ -0.58
TVP23A-207ENST00000573360 CD55P08174 381 aa11.45□□□□□ -0.58
TVP23A-207ENST00000573360 BCL2P10415 239 aa11.45□□□□□ -0.58
TVP23A-207ENST00000573360 ACANP16112 2415 aa11.45□□□□□ -0.58
TVP23A-207ENST00000573360 FLNBO75369 2602 aaKnown RBP11.45□□□□□ -0.58
TVP23A-207ENST00000573360 C15orf65H3BRN8 121 aa11.45□□□□□ -0.58
TVP23A-207ENST00000573360 SOX15O60248 233 aa11.45□□□□□ -0.58
TVP23A-207ENST00000573360 ODF3L1Q8IXM7 274 aa11.45□□□□□ -0.58
TVP23A-207ENST00000573360 RCC1LQ96I51 464 aaKnown RBP11.45□□□□□ -0.58
TVP23A-207ENST00000573360 SMDT1Q9H4I9 107 aa11.45□□□□□ -0.58
TVP23A-207ENST00000573360 LIN7CQ9NUP9 197 aaKnown RBP11.45□□□□□ -0.58
TVP23A-207ENST00000573360 AURKAIP1Q9NWT8 199 aaPredicted RBP11.45□□□□□ -0.58
TVP23A-207ENST00000573360 LOC102723971A0A1B0GUV8 181 aa11.45□□□□□ -0.58
TVP23A-207ENST00000573360 DUXBA0A1W2PPF3 345 aa11.45□□□□□ -0.58
TVP23A-207ENST00000573360 KIAA1324LA8MWY0 1029 aaPredicted RBP11.45□□□□□ -0.58
TVP23A-207ENST00000573360 DEFA4P12838 97 aa11.45□□□□□ -0.58
TVP23A-207ENST00000573360 CFHR2P36980 270 aa11.45□□□□□ -0.58
TVP23A-207ENST00000573360 GPR6P46095 362 aaPredicted RBP11.45□□□□□ -0.58
TVP23A-207ENST00000573360 GNB2P62879 340 aa11.45□□□□□ -0.58
TVP23A-207ENST00000573360 LCN2P80188 198 aa11.45□□□□□ -0.58
TVP23A-207ENST00000573360 DIAPH2-AS1Q14236 149 aa11.45□□□□□ -0.58
TVP23A-207ENST00000573360 C17orf58Q2M2W7 97 aa11.45□□□□□ -0.58
TVP23A-207ENST00000573360 CT45A1Q5HYN5 189 aa11.45□□□□□ -0.58
TVP23A-207ENST00000573360 CDPF1Q6NVV7 123 aa11.45□□□□□ -0.58
TVP23A-207ENST00000573360 SSX8Q7RTT4 187 aa11.45□□□□□ -0.58
TVP23A-207ENST00000573360 OR4F5Q8NH21 305 aa11.45□□□□□ -0.58
TVP23A-207ENST00000573360 CT45A3Q8NHU0 189 aa11.45□□□□□ -0.58
TVP23A-207ENST00000573360 RAB1CQ92928 201 aa11.45□□□□□ -0.58
TVP23A-207ENST00000573360 C5orf30Q96GV9 206 aa11.45□□□□□ -0.58
TVP23A-207ENST00000573360 LURAP1Q96LR2 239 aa11.45□□□□□ -0.58
TVP23A-207ENST00000573360 OR4F4Q96R69 305 aa11.45□□□□□ -0.58
TVP23A-207ENST00000573360 TRGC1P0CF51 173 aa11.44□□□□□ -0.58
TVP23A-207ENST00000573360 CD24P25063 80 aa11.44□□□□□ -0.58
TVP23A-207ENST00000573360 ZNF645Q8N7E2 425 aa11.44□□□□□ -0.58
TVP23A-207ENST00000573360 RBKSQ9H477 322 aa11.44□□□□□ -0.58
TVP23A-207ENST00000573360 HIST1H2BKO60814 126 aa11.44□□□□□ -0.58
TVP23A-207ENST00000573360 HIST1H2BJP06899 126 aa11.44□□□□□ -0.58
TVP23A-207ENST00000573360 HIST1H2BOP23527 126 aa11.44□□□□□ -0.58
TVP23A-207ENST00000573360 HIST1H2BBP33778 126 aa11.44□□□□□ -0.58
TVP23A-207ENST00000573360 CDX1P47902 265 aaPredicted RBP11.44□□□□□ -0.58
TVP23A-207ENST00000573360 HIST1H2BDP58876 126 aa11.44□□□□□ -0.58
TVP23A-207ENST00000573360 HIST1H2BCP62807 126 aa11.44□□□□□ -0.58
TVP23A-207ENST00000573360 HIST2H2BEQ16778 126 aa11.44□□□□□ -0.58
TVP23A-207ENST00000573360 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.44□□□□□ -0.58
TVP23A-207ENST00000573360 HIST1H2BHQ93079 126 aa11.44□□□□□ -0.58
TVP23A-207ENST00000573360 POM121Q96HA1 1249 aa11.44□□□□□ -0.58
TVP23A-207ENST00000573360 HIST1H2BNQ99877 126 aa11.44□□□□□ -0.58
TVP23A-207ENST00000573360 HIST1H2BMQ99879 126 aa11.44□□□□□ -0.58
TVP23A-207ENST00000573360 SSX3Q99909 188 aa11.44□□□□□ -0.58
TVP23A-207ENST00000573360 IGKV1-5P01602 117 aa11.44□□□□□ -0.58
TVP23A-207ENST00000573360 ADH4P08319 380 aa11.44□□□□□ -0.58
TVP23A-207ENST00000573360 HOXA5P20719 270 aa11.44□□□□□ -0.58
TVP23A-207ENST00000573360 H2BFWTQ7Z2G1 175 aa11.44□□□□□ -0.58
TVP23A-207ENST00000573360 OR5B12Q96R08 314 aa11.44□□□□□ -0.58
TVP23A-207ENST00000573360 S1PR3Q99500 378 aa11.44□□□□□ -0.58
TVP23A-207ENST00000573360 IGHV3OR16-10A0A075B7F0 116 aa11.43□□□□□ -0.58
TVP23A-207ENST00000573360 SAA2-SAA4A0A096LPE2 208 aa11.43□□□□□ -0.58
TVP23A-207ENST00000573360 TRBV6-6A0A0A6YYG2 114 aa11.43□□□□□ -0.58
TVP23A-207ENST00000573360 A0A1W2PPQ1 181 aa11.43□□□□□ -0.58
TVP23A-207ENST00000573360 FCN3O75636 299 aa11.43□□□□□ -0.58
TVP23A-207ENST00000573360 IGKV1-39P01597 117 aa11.43□□□□□ -0.58
TVP23A-207ENST00000573360 IGLV2-14P01704 120 aa11.43□□□□□ -0.58
TVP23A-207ENST00000573360 IGKV1D-39P04432 117 aa11.43□□□□□ -0.58
TVP23A-207ENST00000573360 SAA2P0DJI9 122 aaPredicted RBP11.43□□□□□ -0.58
TVP23A-207ENST00000573360 DEFA6Q01524 100 aa11.43□□□□□ -0.58
TVP23A-207ENST00000573360 PYY3Q5JQD4 70 aa11.43□□□□□ -0.58
TVP23A-207ENST00000573360 FRZBQ92765 325 aa11.43□□□□□ -0.58
TVP23A-207ENST00000573360 IDI2-AS1Q9NZ38 188 aa11.43□□□□□ -0.58
TVP23A-207ENST00000573360 A0A0U1RQK1 487 aa11.43□□□□□ -0.58
TVP23A-207ENST00000573360 UBE2G2P60604 165 aa11.43□□□□□ -0.58
TVP23A-207ENST00000573360 TCF23Q7RTU1 214 aa11.43□□□□□ -0.58
TVP23A-207ENST00000573360 PCGF1Q9BSM1 259 aa11.43□□□□□ -0.58
TVP23A-207ENST00000573360 C11orf1Q9H5F2 150 aa11.43□□□□□ -0.58
TVP23A-207ENST00000573360 A6NNC1 897 aa11.42□□□□□ -0.58
TVP23A-207ENST00000573360 FGF7P21781 194 aa11.42□□□□□ -0.58
TVP23A-207ENST00000573360 CST9LP1Q5W188 147 aa11.42□□□□□ -0.58
TVP23A-207ENST00000573360 SSX7Q7RTT5 188 aa11.42□□□□□ -0.58
TVP23A-207ENST00000573360 SLC35E3Q7Z769 313 aa11.42□□□□□ -0.58
TVP23A-207ENST00000573360 MAPK1IP1LQ8NDC0 245 aa11.42□□□□□ -0.58
TVP23A-207ENST00000573360 RHOVQ96L33 236 aa11.42□□□□□ -0.58
TVP23A-207ENST00000573360 SEBOXQ9HB31 216 aaPredicted RBP11.42□□□□□ -0.58
TVP23A-207ENST00000573360 PPIAL4CA0A0B4J2A2 164 aa11.42□□□□□ -0.58
TVP23A-207ENST00000573360 PPIAL4GP0DN37 164 aa11.42□□□□□ -0.58
TVP23A-207ENST00000573360 EFNB3Q15768 340 aa11.42□□□□□ -0.58
TVP23A-207ENST00000573360 Q6ZS49 121 aa11.42□□□□□ -0.58
TVP23A-207ENST00000573360 C1orf229Q6ZS94 237 aaPredicted RBP11.42□□□□□ -0.58
TVP23A-207ENST00000573360 OR8B3Q8NGG8 313 aa11.42□□□□□ -0.58
TVP23A-207ENST00000573360 Q8TCH9 128 aa11.42□□□□□ -0.58
TVP23A-207ENST00000573360 OR8B2Q96RD0 313 aa11.42□□□□□ -0.58
TVP23A-207ENST00000573360 GAL3ST2Q9H3Q3 398 aa11.42□□□□□ -0.58
TVP23A-207ENST00000573360 HILPDAQ9Y5L2 63 aa11.42□□□□□ -0.58
TVP23A-207ENST00000573360 ZNF705GA8MUZ8 300 aaPredicted RBP11.42□□□□□ -0.58
TVP23A-207ENST00000573360 MYOD1P15172 320 aa11.42□□□□□ -0.58
TVP23A-207ENST00000573360 PSMB3P49720 205 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms