RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 ELOVL1Q9BW60 279 aa5.94□□□□□ -1.46
CDH3-209ENST00000569080 PLEKHA2Q9HB19 425 aa5.94□□□□□ -1.46
CDH3-209ENST00000569080 TMEM140Q9NV12 185 aa5.94□□□□□ -1.46
CDH3-209ENST00000569080 C19orf73Q9NVV2 129 aa5.94□□□□□ -1.46
CDH3-209ENST00000569080 COMMD9Q9P000 198 aa5.94□□□□□ -1.46
CDH3-209ENST00000569080 IZUMO1RA6ND01 250 aa5.93□□□□□ -1.46
CDH3-209ENST00000569080 MFSD2BA6NFX1 497 aa5.93□□□□□ -1.46
CDH3-209ENST00000569080 MARCH11A6NNE9 402 aa5.93□□□□□ -1.46
CDH3-209ENST00000569080 PPP5D1E7EU14 171 aa5.93□□□□□ -1.46
CDH3-209ENST00000569080 UPK2O00526 184 aa5.93□□□□□ -1.46
CDH3-209ENST00000569080 HPGDSO60760 199 aa5.93□□□□□ -1.46
CDH3-209ENST00000569080 PGLYRP1O75594 196 aaPredicted RBP5.93□□□□□ -1.46
CDH3-209ENST00000569080 NDUFB8O95169 186 aa5.93□□□□□ -1.46
CDH3-209ENST00000569080 PMP2P02689 132 aa5.93□□□□□ -1.46
CDH3-209ENST00000569080 REG1AP05451 166 aa5.93□□□□□ -1.46
CDH3-209ENST00000569080 IGHV4-30-4P0DP06 118 aa5.93□□□□□ -1.46
CDH3-209ENST00000569080 NQO2P16083 231 aa5.93□□□□□ -1.46
CDH3-209ENST00000569080 ELK1P19419 428 aa5.93□□□□□ -1.46
CDH3-209ENST00000569080 PRSS3P35030 304 aa5.93□□□□□ -1.46
CDH3-209ENST00000569080 HRH1P35367 487 aa5.93□□□□□ -1.46
CDH3-209ENST00000569080 HERV-K104P61576 105 aa5.93□□□□□ -1.46
CDH3-209ENST00000569080 ATP5G2Q06055 141 aa5.93□□□□□ -1.46
CDH3-209ENST00000569080 RPEL1Q2QD12 228 aa5.93□□□□□ -1.46
CDH3-209ENST00000569080 ZNF585BQ52M93 769 aa5.93□□□□□ -1.46
CDH3-209ENST00000569080 AADACL3Q5VUY0 350 aa5.93□□□□□ -1.46
CDH3-209ENST00000569080 SLC25A42Q86VD7 318 aa5.93□□□□□ -1.46
CDH3-209ENST00000569080 ANKRD13BQ86YJ7 626 aa5.93□□□□□ -1.46
CDH3-209ENST00000569080 OR5H2Q8NGV7 314 aa5.93□□□□□ -1.46
CDH3-209ENST00000569080 CD300LFQ8TDQ1 290 aa5.93□□□□□ -1.46
CDH3-209ENST00000569080 SCPEP1Q9HB40 452 aa5.93□□□□□ -1.46
CDH3-209ENST00000569080 COMMD3Q9UBI1 195 aa5.93□□□□□ -1.46
CDH3-209ENST00000569080 FBXL7Q9UJT9 491 aa5.93□□□□□ -1.46
CDH3-209ENST00000569080 A8MWP6 167 aa5.92□□□□□ -1.46
CDH3-209ENST00000569080 HLA-AP01891 365 aaKnown RBP5.92□□□□□ -1.46
CDH3-209ENST00000569080 F2RP25116 425 aa5.92□□□□□ -1.46
CDH3-209ENST00000569080 HLA-DMAP28067 261 aa5.92□□□□□ -1.46
CDH3-209ENST00000569080 RCVRNP35243 200 aa5.92□□□□□ -1.46
CDH3-209ENST00000569080 ALDH3B2P48448 385 aa5.92□□□□□ -1.46
CDH3-209ENST00000569080 WT1-ASQ06250 92 aa5.92□□□□□ -1.46
CDH3-209ENST00000569080 SNX29P2Q8IUI4 249 aa5.92□□□□□ -1.46
CDH3-209ENST00000569080 CADM3Q8N126 398 aa5.92□□□□□ -1.46
CDH3-209ENST00000569080 Q8N402 240 aa5.92□□□□□ -1.46
CDH3-209ENST00000569080 FCAMRQ8WWV6 532 aa5.92□□□□□ -1.46
CDH3-209ENST00000569080 BORCS5Q969J3 196 aa5.92□□□□□ -1.46
CDH3-209ENST00000569080 RCHY1Q96PM5 261 aa5.92□□□□□ -1.46
CDH3-209ENST00000569080 SRSF8Q9BRL6 282 aaKnown RBP5.92□□□□□ -1.46
CDH3-209ENST00000569080 TM2D3Q9BRN9 247 aa5.92□□□□□ -1.46
CDH3-209ENST00000569080 HRASLSQ9HDD0 168 aa5.92□□□□□ -1.46
CDH3-209ENST00000569080 ZC4H2Q9NQZ6 224 aa5.92□□□□□ -1.46
CDH3-209ENST00000569080 S4R3C0 116 aa5.92□□□□□ -1.46
CDH3-209ENST00000569080 HYDINQ4G0P3 5121 aa5.92□□□□□ -1.46
CDH3-209ENST00000569080 PLECQ15149 4684 aaKnown RBP5.92□□□□□ -1.46
CDH3-209ENST00000569080 TMEM213A2RRL7 107 aa5.91□□□□□ -1.46
CDH3-209ENST00000569080 DPPA5A6NC42 116 aa5.91□□□□□ -1.46
CDH3-209ENST00000569080 C2orf70A6NJV1 201 aa5.91□□□□□ -1.46
CDH3-209ENST00000569080 DBX1A6NMT0 343 aa5.91□□□□□ -1.46
CDH3-209ENST00000569080 H0Y980 276 aa5.91□□□□□ -1.46
CDH3-209ENST00000569080 LGALS9O00182 355 aa5.91□□□□□ -1.46
CDH3-209ENST00000569080 GPR31O00270 319 aa5.91□□□□□ -1.46
CDH3-209ENST00000569080 IGKV1-39P01597 117 aa5.91□□□□□ -1.46
CDH3-209ENST00000569080 IGHV3-23P01764 117 aa5.91□□□□□ -1.46
CDH3-209ENST00000569080 IGKV1D-39P04432 117 aa5.91□□□□□ -1.46
CDH3-209ENST00000569080 RPA2P15927 270 aa5.91□□□□□ -1.46
CDH3-209ENST00000569080 RORCP51449 518 aa5.91□□□□□ -1.46
CDH3-209ENST00000569080 MFAP2P55001 183 aa5.91□□□□□ -1.46
CDH3-209ENST00000569080 CD300EQ496F6 205 aaPredicted RBP5.91□□□□□ -1.46
CDH3-209ENST00000569080 FAM209BQ5JX69 171 aa5.91□□□□□ -1.46
CDH3-209ENST00000569080 LCN12Q6JVE5 192 aa5.91□□□□□ -1.46
CDH3-209ENST00000569080 LHFPL1Q86WI0 220 aa5.91□□□□□ -1.46
CDH3-209ENST00000569080 GDPD1Q8N9F7 314 aa5.91□□□□□ -1.46
CDH3-209ENST00000569080 OR10W1Q8NGF6 305 aa5.91□□□□□ -1.46
CDH3-209ENST00000569080 OR2K2Q8NGT1 345 aa5.91□□□□□ -1.46
CDH3-209ENST00000569080 OR6F1Q8NGZ6 308 aa5.91□□□□□ -1.46
CDH3-209ENST00000569080 ZNF502Q8TBZ5 544 aa5.91□□□□□ -1.46
CDH3-209ENST00000569080 DGCR14Q96DF8 476 aaKnown RBP5.91□□□□□ -1.46
CDH3-209ENST00000569080 ZNF414Q96IQ9 312 aa5.91□□□□□ -1.46
CDH3-209ENST00000569080 AIFM2Q9BRQ8 373 aa5.91□□□□□ -1.46
CDH3-209ENST00000569080 QTRT1Q9BXR0 403 aaKnown RBP5.91□□□□□ -1.46
CDH3-209ENST00000569080 NDUFA4L2Q9NRX3 87 aa5.91□□□□□ -1.46
CDH3-209ENST00000569080 FAM212BQ9NTI7 297 aaPredicted RBP5.91□□□□□ -1.46
CDH3-209ENST00000569080 ZNF785A8K8V0 405 aa5.9□□□□□ -1.46
CDH3-209ENST00000569080 F8W735 103 aaPredicted RBP5.9□□□□□ -1.46
CDH3-209ENST00000569080 M0QYG6 137 aa5.9□□□□□ -1.46
CDH3-209ENST00000569080 GGCTO75223 188 aaKnown RBP5.9□□□□□ -1.46
CDH3-209ENST00000569080 OR2C1O95371 312 aa5.9□□□□□ -1.46
CDH3-209ENST00000569080 DHFRP00374 187 aa5.9□□□□□ -1.46
CDH3-209ENST00000569080 FOLR2P14207 255 aa5.9□□□□□ -1.46
CDH3-209ENST00000569080 HIST1H1BP16401 226 aaKnown RBP5.9□□□□□ -1.46
CDH3-209ENST00000569080 PTBP1P26599 531 aaKnown RBP eCLIP5.9□□□□□ -1.46
CDH3-209ENST00000569080 G6PCP35575 357 aa5.9□□□□□ -1.46
CDH3-209ENST00000569080 ARL3P36405 182 aa5.9□□□□□ -1.46
CDH3-209ENST00000569080 UCP3P55916 312 aa5.9□□□□□ -1.46
CDH3-209ENST00000569080 PHLDA2Q53GA4 152 aa5.9□□□□□ -1.46
CDH3-209ENST00000569080 GPR107Q5VW38 600 aa5.9□□□□□ -1.46
CDH3-209ENST00000569080 THOC7Q6I9Y2 204 aaKnown RBP5.9□□□□□ -1.46
CDH3-209ENST00000569080 CLEC19AQ6UXS0 136 aa5.9□□□□□ -1.46
CDH3-209ENST00000569080 UNQ9165/PRO28630Q6UXU0 137 aa5.9□□□□□ -1.46
CDH3-209ENST00000569080 LINC00322Q6ZN03 302 aaPredicted RBP5.9□□□□□ -1.46
CDH3-209ENST00000569080 GPHB5Q86YW7 130 aa5.9□□□□□ -1.46
CDH3-209ENST00000569080 CMTM1Q8IZ96 169 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms