RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 STPG3Q8N7X2 389 aa9.65□□□□□ -0.86
CDH1-210ENST00000566612 LINC01560Q8TB33 94 aa9.65□□□□□ -0.86
CDH1-210ENST00000566612 GNB4Q9HAV0 340 aa9.65□□□□□ -0.86
CDH1-210ENST00000566612 PARD6AQ9NPB6 346 aa9.65□□□□□ -0.86
CDH1-210ENST00000566612 HSPB7Q9UBY9 170 aa9.65□□□□□ -0.86
CDH1-210ENST00000566612 PITPNC1Q9UKF7 332 aa9.65□□□□□ -0.86
CDH1-210ENST00000566612 MYO15AQ9UKN7 3530 aa9.65□□□□□ -0.86
CDH1-210ENST00000566612 TRBV23-1A0A0A0MS06 115 aa9.65□□□□□ -0.86
CDH1-210ENST00000566612 CXorf65A6NEN9 183 aa9.65□□□□□ -0.86
CDH1-210ENST00000566612 CEACAM1P13688 526 aa9.65□□□□□ -0.86
CDH1-210ENST00000566612 PLA2G2CQ5R387 149 aa9.65□□□□□ -0.86
CDH1-210ENST00000566612 SGK494Q96LW2 274 aa9.65□□□□□ -0.86
CDH1-210ENST00000566612 IL19Q9UHD0 177 aa9.65□□□□□ -0.86
CDH1-210ENST00000566612 SAA2-SAA4A0A096LPE2 208 aa9.65□□□□□ -0.87
CDH1-210ENST00000566612 C1QTNF9BB2RNN3 333 aa9.65□□□□□ -0.87
CDH1-210ENST00000566612 SRRM5B3KS81 715 aa9.65□□□□□ -0.87
CDH1-210ENST00000566612 WISP2O76076 250 aa9.65□□□□□ -0.87
CDH1-210ENST00000566612 LINC00869P0C866 280 aa9.65□□□□□ -0.87
CDH1-210ENST00000566612 SAA2P0DJI9 122 aaPredicted RBP9.65□□□□□ -0.87
CDH1-210ENST00000566612 FAM122AQ96E09 287 aa9.65□□□□□ -0.87
CDH1-210ENST00000566612 MALRD1Q5VYJ5 2156 aa9.64□□□□□ -0.87
CDH1-210ENST00000566612 ELOA3CA0A087WX78 387 aaPredicted RBP9.64□□□□□ -0.87
CDH1-210ENST00000566612 PGPEP1LA6NFU8 196 aa9.64□□□□□ -0.87
CDH1-210ENST00000566612 IGFBP2P18065 325 aa9.64□□□□□ -0.87
CDH1-210ENST00000566612 TOMM20LQ6UXN7 152 aa9.64□□□□□ -0.87
CDH1-210ENST00000566612 SDF2L1Q9HCN8 221 aa9.64□□□□□ -0.87
CDH1-210ENST00000566612 TRBV6-6A0A0A6YYG2 114 aa9.64□□□□□ -0.87
CDH1-210ENST00000566612 TRAV3A0A0B4J244 114 aa9.64□□□□□ -0.87
CDH1-210ENST00000566612 ZNF729A6NN14 1252 aaPredicted RBP9.64□□□□□ -0.87
CDH1-210ENST00000566612 IGKV1-39P01597 117 aa9.64□□□□□ -0.87
CDH1-210ENST00000566612 IGKV1D-39P04432 117 aa9.64□□□□□ -0.87
CDH1-210ENST00000566612 CRISP2P16562 243 aa9.64□□□□□ -0.87
CDH1-210ENST00000566612 CRYBB3P26998 211 aa9.64□□□□□ -0.87
CDH1-210ENST00000566612 PAX9P55771 341 aa9.64□□□□□ -0.87
CDH1-210ENST00000566612 RPEL1Q2QD12 228 aa9.64□□□□□ -0.87
CDH1-210ENST00000566612 NHLRC2Q8NBF2 726 aa9.64□□□□□ -0.87
CDH1-210ENST00000566612 TMEM250H0YL14 139 aa9.64□□□□□ -0.87
CDH1-210ENST00000566612 C10orf113Q5VZT2 155 aa9.64□□□□□ -0.87
CDH1-210ENST00000566612 HILPDAQ9Y5L2 63 aa9.64□□□□□ -0.87
CDH1-210ENST00000566612 SLC25A15Q9Y619 301 aa9.64□□□□□ -0.87
CDH1-210ENST00000566612 H3BTX0 84 aa9.63□□□□□ -0.87
CDH1-210ENST00000566612 IGKV3-15P01624 115 aa9.63□□□□□ -0.87
CDH1-210ENST00000566612 IGHG3P01860 377 aa9.63□□□□□ -0.87
CDH1-210ENST00000566612 IL6RP08887 468 aaPredicted RBP9.63□□□□□ -0.87
CDH1-210ENST00000566612 AGAP20933 346 aa9.63□□□□□ -0.87
CDH1-210ENST00000566612 SPSB3Q6PJ21 355 aa9.63□□□□□ -0.87
CDH1-210ENST00000566612 ZNF474Q6S9Z5 364 aaPredicted RBP9.63□□□□□ -0.87
CDH1-210ENST00000566612 Q6ZR03 302 aa9.63□□□□□ -0.87
CDH1-210ENST00000566612 NABP2Q9BQ15 211 aa9.63□□□□□ -0.87
CDH1-210ENST00000566612 SEBOXQ9HB31 216 aaPredicted RBP9.63□□□□□ -0.87
CDH1-210ENST00000566612 SNURFLB1AK76 121 aa9.63□□□□□ -0.87
CDH1-210ENST00000566612 GATCO43716 136 aaKnown RBP9.63□□□□□ -0.87
CDH1-210ENST00000566612 CXCL1P09341 107 aa9.63□□□□□ -0.87
CDH1-210ENST00000566612 WT1P19544 449 aaPredicted RBP9.63□□□□□ -0.87
CDH1-210ENST00000566612 CDX1P47902 265 aaPredicted RBP9.63□□□□□ -0.87
CDH1-210ENST00000566612 FAM90A1Q86YD7 464 aa9.63□□□□□ -0.87
CDH1-210ENST00000566612 FAM57AQ8TBR7 257 aa9.63□□□□□ -0.87
CDH1-210ENST00000566612 TUBA4BQ9H853 241 aa9.63□□□□□ -0.87
CDH1-210ENST00000566612 ASCL3Q9NQ33 180 aa9.63□□□□□ -0.87
CDH1-210ENST00000566612 METTL1Q9UBP6 276 aaKnown RBP9.63□□□□□ -0.87
CDH1-210ENST00000566612 TIMM9Q9Y5J7 89 aa9.63□□□□□ -0.87
CDH1-210ENST00000566612 MED12LQ86YW9 2145 aa9.63□□□□□ -0.87
CDH1-210ENST00000566612 EML5Q05BV3 1969 aa9.63□□□□□ -0.87
CDH1-210ENST00000566612 IGF2RP11717 2491 aa9.63□□□□□ -0.87
CDH1-210ENST00000566612 YPEL1O60688 119 aa9.63□□□□□ -0.87
CDH1-210ENST00000566612 RAB4AP20338 218 aa9.63□□□□□ -0.87
CDH1-210ENST00000566612 RND2P52198 227 aa9.63□□□□□ -0.87
CDH1-210ENST00000566612 ERVFRD-1P60508 538 aa9.63□□□□□ -0.87
CDH1-210ENST00000566612 FXYD3Q14802 87 aa9.63□□□□□ -0.87
CDH1-210ENST00000566612 MMDQ15546 238 aa9.63□□□□□ -0.87
CDH1-210ENST00000566612 CRIP3Q6Q6R5 217 aa9.63□□□□□ -0.87
CDH1-210ENST00000566612 OR5AU1Q8NGC0 362 aa9.63□□□□□ -0.87
CDH1-210ENST00000566612 OR1L4Q8NGR5 311 aa9.63□□□□□ -0.87
CDH1-210ENST00000566612 NPIPB3Q92617 1050 aa9.63□□□□□ -0.87
CDH1-210ENST00000566612 YPEL2Q96QA6 119 aa9.63□□□□□ -0.87
CDH1-210ENST00000566612 ANKHD1Q8IWZ3 2542 aaKnown RBP9.63□□□□□ -0.87
CDH1-210ENST00000566612 IGKV1D-17A0A075B6S4 117 aa9.63□□□□□ -0.87
CDH1-210ENST00000566612 ACAA1P09110 424 aaPredicted RBP9.63□□□□□ -0.87
CDH1-210ENST00000566612 MYOD1P15172 320 aa9.63□□□□□ -0.87
CDH1-210ENST00000566612 GNB2P62879 340 aa9.63□□□□□ -0.87
CDH1-210ENST00000566612 GAMTQ14353 236 aa9.63□□□□□ -0.87
CDH1-210ENST00000566612 ELOBQ15370 118 aa9.63□□□□□ -0.87
CDH1-210ENST00000566612 PQLC2Q6ZP29 291 aa9.63□□□□□ -0.87
CDH1-210ENST00000566612 CYP2G1PQ6ZSU1 146 aa9.63□□□□□ -0.87
CDH1-210ENST00000566612 PDPNQ86YL7 162 aa9.63□□□□□ -0.87
CDH1-210ENST00000566612 OR1L6Q8NGR2 347 aa9.63□□□□□ -0.87
CDH1-210ENST00000566612 PRR7Q8TB68 274 aa9.63□□□□□ -0.87
CDH1-210ENST00000566612 RAB1CQ92928 201 aa9.63□□□□□ -0.87
CDH1-210ENST00000566612 ZNF586Q9NXT0 402 aa9.63□□□□□ -0.87
CDH1-210ENST00000566612 PLA2G2EQ9NZK7 142 aa9.63□□□□□ -0.87
CDH1-210ENST00000566612 CACNA1AO00555 2505 aa9.62□□□□□ -0.87
CDH1-210ENST00000566612 LYNX1G3V0Z9 82 aa9.62□□□□□ -0.87
CDH1-210ENST00000566612 K7EQM0 130 aa9.62□□□□□ -0.87
CDH1-210ENST00000566612 CHEK1O14757 476 aa9.62□□□□□ -0.87
CDH1-210ENST00000566612 SLC31A2O15432 143 aa9.62□□□□□ -0.87
CDH1-210ENST00000566612 CGAP01215 116 aa9.62□□□□□ -0.87
CDH1-210ENST00000566612 IGHV1-46P01743 117 aa9.62□□□□□ -0.87
CDH1-210ENST00000566612 LYNX1P0DP58 116 aa9.62□□□□□ -0.87
CDH1-210ENST00000566612 PAX5Q02548 391 aa9.62□□□□□ -0.87
CDH1-210ENST00000566612 ETFRF1Q6IPR1 90 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms