RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 TRBV12-3P01733 135 aa13.64□□□□□ -0.23
CMTM3-204ENST00000562357 PSMB6P28072 239 aa13.64□□□□□ -0.23
CMTM3-204ENST00000562357 CTF1Q16619 201 aa13.64□□□□□ -0.23
CMTM3-204ENST00000562357 C15orf40Q8WUR7 153 aa13.64□□□□□ -0.23
CMTM3-204ENST00000562357 SRSF8Q9BRL6 282 aaKnown RBP13.64□□□□□ -0.23
CMTM3-204ENST00000562357 FXYD6Q9H0Q3 95 aa13.64□□□□□ -0.23
CMTM3-204ENST00000562357 SORL1Q92673 2214 aa13.64□□□□□ -0.23
CMTM3-204ENST00000562357 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.63□□□□□ -0.23
CMTM3-204ENST00000562357 RBMXL2O75526 392 aaKnown RBP13.63□□□□□ -0.23
CMTM3-204ENST00000562357 IFNA6P05013 189 aa13.63□□□□□ -0.23
CMTM3-204ENST00000562357 CRYGCP07315 174 aa13.63□□□□□ -0.23
CMTM3-204ENST00000562357 FGF2P09038 288 aa13.63□□□□□ -0.23
CMTM3-204ENST00000562357 AREGP15514 252 aa13.63□□□□□ -0.23
CMTM3-204ENST00000562357 THOC7Q6I9Y2 204 aaKnown RBP13.63□□□□□ -0.23
CMTM3-204ENST00000562357 HAPLN4Q86UW8 402 aa13.63□□□□□ -0.23
CMTM3-204ENST00000562357 LYSMD2Q8IV50 215 aa13.63□□□□□ -0.23
CMTM3-204ENST00000562357 EEF1AKMT3Q96AZ1 226 aa13.63□□□□□ -0.23
CMTM3-204ENST00000562357 DGCR14Q96DF8 476 aaKnown RBP13.63□□□□□ -0.23
CMTM3-204ENST00000562357 NAA50Q9GZZ1 169 aaKnown RBP13.63□□□□□ -0.23
CMTM3-204ENST00000562357 EXTL2Q9UBQ6 330 aa13.63□□□□□ -0.23
CMTM3-204ENST00000562357 MARCH11A6NNE9 402 aa13.62□□□□□ -0.23
CMTM3-204ENST00000562357 E7EUB6 86 aa13.62□□□□□ -0.23
CMTM3-204ENST00000562357 SNAPC5O75971 98 aa13.62□□□□□ -0.23
CMTM3-204ENST00000562357 CTRB1P17538 263 aa13.62□□□□□ -0.23
CMTM3-204ENST00000562357 OR2B8PP59922 312 aa13.62□□□□□ -0.23
CMTM3-204ENST00000562357 PHLDA2Q53GA4 152 aa13.62□□□□□ -0.23
CMTM3-204ENST00000562357 CTRB2Q6GPI1 263 aa13.62□□□□□ -0.23
CMTM3-204ENST00000562357 LCN12Q6JVE5 192 aa13.62□□□□□ -0.23
CMTM3-204ENST00000562357 HSD17B13Q7Z5P4 300 aaPredicted RBP13.62□□□□□ -0.23
CMTM3-204ENST00000562357 ASCL2Q99929 193 aa13.62□□□□□ -0.23
CMTM3-204ENST00000562357 QTRT1Q9BXR0 403 aaKnown RBP13.62□□□□□ -0.23
CMTM3-204ENST00000562357 THYN1Q9P016 225 aa13.62□□□□□ -0.23
CMTM3-204ENST00000562357 U3KQK5 164 aa13.62□□□□□ -0.23
CMTM3-204ENST00000562357 BMPR1BO00238 502 aa13.61□□□□□ -0.23
CMTM3-204ENST00000562357 GGCTO75223 188 aaKnown RBP13.61□□□□□ -0.23
CMTM3-204ENST00000562357 MYOD1P15172 320 aa13.61□□□□□ -0.23
CMTM3-204ENST00000562357 RPA2P15927 270 aa13.61□□□□□ -0.23
CMTM3-204ENST00000562357 LPAR6P43657 344 aa13.61□□□□□ -0.23
CMTM3-204ENST00000562357 RNASE10Q5GAN6 216 aaKnown RBP13.61□□□□□ -0.23
CMTM3-204ENST00000562357 SGPP2Q8IWX5 399 aa13.61□□□□□ -0.23
CMTM3-204ENST00000562357 SLC38A6Q8IZM9 456 aa13.61□□□□□ -0.23
CMTM3-204ENST00000562357 FCAMRQ8WWV6 532 aa13.61□□□□□ -0.23
CMTM3-204ENST00000562357 CXorf58Q96LI9 332 aa13.61□□□□□ -0.23
CMTM3-204ENST00000562357 WWC2-AS2Q96NR7 200 aa13.61□□□□□ -0.23
CMTM3-204ENST00000562357 SIGLEC8Q9NYZ4 499 aa13.61□□□□□ -0.23
CMTM3-204ENST00000562357 RGS5O15539 181 aa13.6□□□□□ -0.23
CMTM3-204ENST00000562357 TPPPO94811 219 aa13.6□□□□□ -0.23
CMTM3-204ENST00000562357 KRASP01116 189 aa13.6□□□□□ -0.23
CMTM3-204ENST00000562357 REG1AP05451 166 aa13.6□□□□□ -0.23
CMTM3-204ENST00000562357 RNASE12Q5GAN4 147 aaKnown RBP13.6□□□□□ -0.23
CMTM3-204ENST00000562357 GTSCR1Q86UQ5 136 aa13.6□□□□□ -0.23
CMTM3-204ENST00000562357 Q8N402 240 aa13.6□□□□□ -0.23
CMTM3-204ENST00000562357 OR1L8Q8NGR8 309 aa13.6□□□□□ -0.23
CMTM3-204ENST00000562357 DYNLRB2Q8TF09 96 aa13.6□□□□□ -0.23
CMTM3-204ENST00000562357 TSC22D3Q99576 134 aa13.6□□□□□ -0.23
CMTM3-204ENST00000562357 TRAV3A0A0B4J244 114 aa13.59□□□□□ -0.23
CMTM3-204ENST00000562357 A0A1B0GW64 132 aa13.59□□□□□ -0.23
CMTM3-204ENST00000562357 PPP5D1E7EU14 171 aa13.59□□□□□ -0.23
CMTM3-204ENST00000562357 NOL3O60936 208 aaKnown RBP13.59□□□□□ -0.23
CMTM3-204ENST00000562357 NDUFB8O95169 186 aa13.59□□□□□ -0.23
CMTM3-204ENST00000562357 CSN3P07498 182 aa13.59□□□□□ -0.23
CMTM3-204ENST00000562357 TRAPPC2P0DI81 140 aa13.59□□□□□ -0.23
CMTM3-204ENST00000562357 TRAPPC2BP0DI82 140 aa13.59□□□□□ -0.23
CMTM3-204ENST00000562357 TBPP20226 339 aa13.59□□□□□ -0.23
CMTM3-204ENST00000562357 ARL3P36405 182 aa13.59□□□□□ -0.23
CMTM3-204ENST00000562357 UCP3P55916 312 aa13.59□□□□□ -0.23
CMTM3-204ENST00000562357 C19orf35Q6ZS72 473 aa13.59□□□□□ -0.23
CMTM3-204ENST00000562357 FANCD2OSQ96PS1 177 aa13.59□□□□□ -0.23
CMTM3-204ENST00000562357 HINT2Q9BX68 163 aa13.59□□□□□ -0.23
CMTM3-204ENST00000562357 FAM212BQ9NTI7 297 aaPredicted RBP13.59□□□□□ -0.23
CMTM3-204ENST00000562357 FKBP11Q9NYL4 201 aa13.59□□□□□ -0.23
CMTM3-204ENST00000562357 IGLV11-55A0A075B6I3 123 aa13.58□□□□□ -0.24
CMTM3-204ENST00000562357 TRBV7-1A0A0A6YYK4 115 aa13.58□□□□□ -0.24
CMTM3-204ENST00000562357 IGLC7A0M8Q6 106 aa13.58□□□□□ -0.24
CMTM3-204ENST00000562357 M0QYG6 137 aa13.58□□□□□ -0.24
CMTM3-204ENST00000562357 IGHV3-23P01764 117 aa13.58□□□□□ -0.24
CMTM3-204ENST00000562357 PGAM2P15259 253 aa13.58□□□□□ -0.24
CMTM3-204ENST00000562357 G6PCP35575 357 aa13.58□□□□□ -0.24
CMTM3-204ENST00000562357 ALDH3B2P48448 385 aa13.58□□□□□ -0.24
CMTM3-204ENST00000562357 CLEC19AQ6UXS0 136 aa13.58□□□□□ -0.24
CMTM3-204ENST00000562357 IL34Q6ZMJ4 242 aa13.58□□□□□ -0.24
CMTM3-204ENST00000562357 TBC1D26Q86UD7 250 aa13.58□□□□□ -0.24
CMTM3-204ENST00000562357 CLVS1Q8IUQ0 354 aaPredicted RBP13.58□□□□□ -0.24
CMTM3-204ENST00000562357 CADM3Q8N126 398 aa13.58□□□□□ -0.24
CMTM3-204ENST00000562357 OR2K2Q8NGT1 345 aa13.58□□□□□ -0.24
CMTM3-204ENST00000562357 LSM10Q969L4 123 aaKnown RBP13.58□□□□□ -0.24
CMTM3-204ENST00000562357 PRNDQ9UKY0 176 aa13.58□□□□□ -0.24
CMTM3-204ENST00000562357 CGB1A6NKQ9 187 aa13.57□□□□□ -0.24
CMTM3-204ENST00000562357 FRMD6-AS1P0C7T7 363 aa13.57□□□□□ -0.24
CMTM3-204ENST00000562357 OR13C7P0DN81 318 aa13.57□□□□□ -0.24
CMTM3-204ENST00000562357 MECP2P51608 486 aaKnown RBP13.57□□□□□ -0.24
CMTM3-204ENST00000562357 FAM106AQ4KMX7 169 aa13.57□□□□□ -0.24
CMTM3-204ENST00000562357 ARRDC1Q8N5I2 433 aa13.57□□□□□ -0.24
CMTM3-204ENST00000562357 GDPD1Q8N9F7 314 aa13.57□□□□□ -0.24
CMTM3-204ENST00000562357 OR52I2Q8NH67 350 aa13.57□□□□□ -0.24
CMTM3-204ENST00000562357 RAB2BQ8WUD1 216 aa13.57□□□□□ -0.24
CMTM3-204ENST00000562357 TMEM56Q96MV1 263 aa13.57□□□□□ -0.24
CMTM3-204ENST00000562357 KLK11Q9UBX7 282 aa13.57□□□□□ -0.24
CMTM3-204ENST00000562357 OR51B2Q9Y5P1 312 aa13.57□□□□□ -0.24
CMTM3-204ENST00000562357 S4R3C0 116 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms