RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 IFT46Q9NQC8 304 aa7.81□□□□□ -1.16
CLK3-205ENST00000561673 BET1LQ9NYM9 111 aa7.81□□□□□ -1.16
CLK3-205ENST00000561673 PEMTQ9UBM1 199 aa7.81□□□□□ -1.16
CLK3-205ENST00000561673 ANAPC10Q9UM13 185 aa7.81□□□□□ -1.16
CLK3-205ENST00000561673 CSMD3Q7Z407 3707 aa7.8□□□□□ -1.16
CLK3-205ENST00000561673 TRAV3A0A0B4J244 114 aa7.8□□□□□ -1.16
CLK3-205ENST00000561673 CGB1A6NKQ9 187 aa7.8□□□□□ -1.16
CLK3-205ENST00000561673 OR2C1O95371 312 aa7.8□□□□□ -1.16
CLK3-205ENST00000561673 HPRT1P00492 218 aa7.8□□□□□ -1.16
CLK3-205ENST00000561673 IGHV3-23P01764 117 aa7.8□□□□□ -1.16
CLK3-205ENST00000561673 PMP2P02689 132 aa7.8□□□□□ -1.16
CLK3-205ENST00000561673 REG1AP05451 166 aa7.8□□□□□ -1.16
CLK3-205ENST00000561673 CTRB1P17538 263 aa7.8□□□□□ -1.16
CLK3-205ENST00000561673 NAT1P18440 290 aa7.8□□□□□ -1.16
CLK3-205ENST00000561673 OR2B8PP59922 312 aa7.8□□□□□ -1.16
CLK3-205ENST00000561673 HERV-K104P61576 105 aa7.8□□□□□ -1.16
CLK3-205ENST00000561673 CATR1Q13166 79 aa7.8□□□□□ -1.16
CLK3-205ENST00000561673 KLK9Q2XQG4 91 aa7.8□□□□□ -1.16
CLK3-205ENST00000561673 CTRB2Q6GPI1 263 aa7.8□□□□□ -1.16
CLK3-205ENST00000561673 LCN12Q6JVE5 192 aa7.8□□□□□ -1.16
CLK3-205ENST00000561673 SGPP2Q8IWX5 399 aa7.8□□□□□ -1.16
CLK3-205ENST00000561673 Q8N402 240 aa7.8□□□□□ -1.16
CLK3-205ENST00000561673 SLC25A46Q96AG3 418 aa7.8□□□□□ -1.16
CLK3-205ENST00000561673 TM2D3Q9BRN9 247 aa7.8□□□□□ -1.16
CLK3-205ENST00000561673 ZNF2Q9BSG1 426 aaPredicted RBP7.8□□□□□ -1.16
CLK3-205ENST00000561673 EHFQ9NZC4 300 aa7.8□□□□□ -1.16
CLK3-205ENST00000561673 KLK9Q9UKQ9 250 aa7.8□□□□□ -1.16
CLK3-205ENST00000561673 S4R3C0 116 aa7.8□□□□□ -1.16
CLK3-205ENST00000561673 TMEM238LA0A1B0GVL6 79 aa7.79□□□□□ -1.16
CLK3-205ENST00000561673 C3orf84H3BNL1 204 aa7.79□□□□□ -1.16
CLK3-205ENST00000561673 UPK2O00526 184 aa7.79□□□□□ -1.16
CLK3-205ENST00000561673 GGCTO75223 188 aaKnown RBP7.79□□□□□ -1.16
CLK3-205ENST00000561673 PGLYRP1O75594 196 aaPredicted RBP7.79□□□□□ -1.16
CLK3-205ENST00000561673 S1PR2O95136 353 aa7.79□□□□□ -1.16
CLK3-205ENST00000561673 DHFRP00374 187 aa7.79□□□□□ -1.16
CLK3-205ENST00000561673 DEFA4P12838 97 aa7.79□□□□□ -1.16
CLK3-205ENST00000561673 NQO2P16083 231 aa7.79□□□□□ -1.16
CLK3-205ENST00000561673 ATF4P18848 351 aaPredicted RBP7.79□□□□□ -1.16
CLK3-205ENST00000561673 EDN2P20800 178 aa7.79□□□□□ -1.16
CLK3-205ENST00000561673 PRSS3P35030 304 aa7.79□□□□□ -1.16
CLK3-205ENST00000561673 POU2AF1Q16633 256 aa7.79□□□□□ -1.16
CLK3-205ENST00000561673 CD300EQ496F6 205 aaPredicted RBP7.79□□□□□ -1.16
CLK3-205ENST00000561673 FAM209BQ5JX69 171 aa7.79□□□□□ -1.16
CLK3-205ENST00000561673 AADACL3Q5VUY0 350 aa7.79□□□□□ -1.16
CLK3-205ENST00000561673 CLEC19AQ6UXS0 136 aa7.79□□□□□ -1.16
CLK3-205ENST00000561673 GTSCR1Q86UQ5 136 aa7.79□□□□□ -1.16
CLK3-205ENST00000561673 LYSMD2Q8IV50 215 aa7.79□□□□□ -1.16
CLK3-205ENST00000561673 DMBX1Q8NFW5 382 aa7.79□□□□□ -1.16
CLK3-205ENST00000561673 CD300LFQ8TDQ1 290 aa7.79□□□□□ -1.16
CLK3-205ENST00000561673 MOB3AQ96BX8 217 aa7.79□□□□□ -1.16
CLK3-205ENST00000561673 CCDC140Q96MF4 163 aa7.79□□□□□ -1.16
CLK3-205ENST00000561673 PLEKHA2Q9HB19 425 aa7.79□□□□□ -1.16
CLK3-205ENST00000561673 TMEM140Q9NV12 185 aa7.79□□□□□ -1.16
CLK3-205ENST00000561673 LYSTQ99698 3801 aa7.79□□□□□ -1.16
CLK3-205ENST00000561673 STARD9Q9P2P6 4700 aa7.78□□□□□ -1.16
CLK3-205ENST00000561673 IGLV11-55A0A075B6I3 123 aa7.78□□□□□ -1.16
CLK3-205ENST00000561673 C2orf70A6NJV1 201 aa7.78□□□□□ -1.16
CLK3-205ENST00000561673 EIF4EP06730 217 aaKnown RBP7.78□□□□□ -1.16
CLK3-205ENST00000561673 FOLR2P14207 255 aa7.78□□□□□ -1.16
CLK3-205ENST00000561673 RPA2P15927 270 aa7.78□□□□□ -1.16
CLK3-205ENST00000561673 HIST1H1BP16401 226 aaKnown RBP7.78□□□□□ -1.16
CLK3-205ENST00000561673 HLA-DMAP28067 261 aa7.78□□□□□ -1.16
CLK3-205ENST00000561673 HRH1P35367 487 aa7.78□□□□□ -1.16
CLK3-205ENST00000561673 TAS2R46P59540 309 aa7.78□□□□□ -1.16
CLK3-205ENST00000561673 VBP1P61758 197 aa7.78□□□□□ -1.16
CLK3-205ENST00000561673 NCS1P62166 190 aa7.78□□□□□ -1.16
CLK3-205ENST00000561673 DEFB114Q30KQ6 69 aa7.78□□□□□ -1.16
CLK3-205ENST00000561673 GPHB5Q86YW7 130 aa7.78□□□□□ -1.16
CLK3-205ENST00000561673 OR2K2Q8NGT1 345 aa7.78□□□□□ -1.16
CLK3-205ENST00000561673 OR5H2Q8NGV7 314 aa7.78□□□□□ -1.16
CLK3-205ENST00000561673 MUC7Q8TAX7 377 aa7.78□□□□□ -1.16
CLK3-205ENST00000561673 EEF1AKMT3Q96AZ1 226 aa7.78□□□□□ -1.16
CLK3-205ENST00000561673 FUNDC2Q9BWH2 189 aa7.78□□□□□ -1.16
CLK3-205ENST00000561673 TUBA4BQ9H853 241 aa7.78□□□□□ -1.16
CLK3-205ENST00000561673 COMMD3Q9UBI1 195 aa7.78□□□□□ -1.16
CLK3-205ENST00000561673 TRBV7-1A0A0A6YYK4 115 aa7.77□□□□□ -1.17
CLK3-205ENST00000561673 TEX50A0A1B0GTY4 177 aa7.77□□□□□ -1.17
CLK3-205ENST00000561673 IGLC7A0M8Q6 106 aa7.77□□□□□ -1.17
CLK3-205ENST00000561673 MFSD2BA6NFX1 497 aa7.77□□□□□ -1.17
CLK3-205ENST00000561673 ZNF785A8K8V0 405 aa7.77□□□□□ -1.17
CLK3-205ENST00000561673 LGALS9O00182 355 aa7.77□□□□□ -1.17
CLK3-205ENST00000561673 RLN1P04808 185 aa7.77□□□□□ -1.17
CLK3-205ENST00000561673 CLEC3BP05452 202 aa7.77□□□□□ -1.17
CLK3-205ENST00000561673 FGF2P09038 288 aa7.77□□□□□ -1.17
CLK3-205ENST00000561673 F2RP25116 425 aa7.77□□□□□ -1.17
CLK3-205ENST00000561673 ARL3P36405 182 aa7.77□□□□□ -1.17
CLK3-205ENST00000561673 HAGHQ16775 308 aa7.77□□□□□ -1.17
CLK3-205ENST00000561673 ZNF585BQ52M93 769 aa7.77□□□□□ -1.17
CLK3-205ENST00000561673 CASC10Q5T4H9 136 aa7.77□□□□□ -1.17
CLK3-205ENST00000561673 OR10W1Q8NGF6 305 aa7.77□□□□□ -1.17
CLK3-205ENST00000561673 OR6F1Q8NGZ6 308 aa7.77□□□□□ -1.17
CLK3-205ENST00000561673 GPX8Q8TED1 209 aa7.77□□□□□ -1.17
CLK3-205ENST00000561673 FCAMRQ8WWV6 532 aa7.77□□□□□ -1.17
CLK3-205ENST00000561673 BORCS5Q969J3 196 aa7.77□□□□□ -1.17
CLK3-205ENST00000561673 DGCR14Q96DF8 476 aaKnown RBP7.77□□□□□ -1.17
CLK3-205ENST00000561673 SRSF8Q9BRL6 282 aaKnown RBP7.77□□□□□ -1.17
CLK3-205ENST00000561673 QTRT1Q9BXR0 403 aaKnown RBP7.77□□□□□ -1.17
CLK3-205ENST00000561673 COMMD5Q9GZQ3 224 aa7.77□□□□□ -1.17
CLK3-205ENST00000561673 COMMD9Q9P000 198 aa7.77□□□□□ -1.17
CLK3-205ENST00000561673 SMIM31A0A1B0GVY4 71 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms