RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 DTD1Q8TEA8 209 aa8.28□□□□□ -1.08
USP3-219ENST00000561326 EAF1Q96JC9 268 aaPredicted RBP8.28□□□□□ -1.08
USP3-219ENST00000561326 MEGF9Q9H1U4 602 aa8.28□□□□□ -1.08
USP3-219ENST00000561326 HEYLQ9NQ87 328 aaPredicted RBP8.28□□□□□ -1.08
USP3-219ENST00000561326 PSENENQ9NZ42 101 aa8.28□□□□□ -1.08
USP3-219ENST00000561326 SIGLEC9Q9Y336 463 aa8.28□□□□□ -1.08
USP3-219ENST00000561326 ZANQ9Y493 2812 aa8.27□□□□□ -1.09
USP3-219ENST00000561326 IGHV3OR16-10A0A075B7F0 116 aa8.27□□□□□ -1.09
USP3-219ENST00000561326 TRAV3A0A0B4J244 114 aa8.27□□□□□ -1.09
USP3-219ENST00000561326 RNF222A6NCQ9 220 aa8.27□□□□□ -1.09
USP3-219ENST00000561326 RRHO14718 337 aa8.27□□□□□ -1.09
USP3-219ENST00000561326 SMAD7O15105 426 aaKnown RBP8.27□□□□□ -1.09
USP3-219ENST00000561326 NBR2O15453 112 aa8.27□□□□□ -1.09
USP3-219ENST00000561326 IGHV4-38-2P0DP08 117 aa8.27□□□□□ -1.09
USP3-219ENST00000561326 HKR1P10072 659 aa8.27□□□□□ -1.09
USP3-219ENST00000561326 TMEM11P17152 192 aa8.27□□□□□ -1.09
USP3-219ENST00000561326 DYNLT3P51808 116 aa8.27□□□□□ -1.09
USP3-219ENST00000561326 ATP5IP56385 69 aaPredicted RBP8.27□□□□□ -1.09
USP3-219ENST00000561326 HNF4GQ14541 408 aa8.27□□□□□ -1.09
USP3-219ENST00000561326 MMDQ15546 238 aa8.27□□□□□ -1.09
USP3-219ENST00000561326 BRD3OSQ6XYD6 125 aa8.27□□□□□ -1.09
USP3-219ENST00000561326 PPP1R27Q86WC6 154 aa8.27□□□□□ -1.09
USP3-219ENST00000561326 STX12Q86Y82 276 aa8.27□□□□□ -1.09
USP3-219ENST00000561326 DYNAPQ8N1N2 210 aa8.27□□□□□ -1.09
USP3-219ENST00000561326 NPBQ8NG41 125 aa8.27□□□□□ -1.09
USP3-219ENST00000561326 C17orf50Q8WW18 174 aa8.27□□□□□ -1.09
USP3-219ENST00000561326 AJUBAQ96IF1 538 aa8.27□□□□□ -1.09
USP3-219ENST00000561326 RITA1Q96K30 269 aa8.27□□□□□ -1.09
USP3-219ENST00000561326 HINT2Q9BX68 163 aa8.27□□□□□ -1.09
USP3-219ENST00000561326 GON7Q9BXV9 100 aa8.27□□□□□ -1.09
USP3-219ENST00000561326 LYRM2Q9NU23 88 aaPredicted RBP8.27□□□□□ -1.09
USP3-219ENST00000561326 METTL1Q9UBP6 276 aaKnown RBP8.27□□□□□ -1.09
USP3-219ENST00000561326 TCF19Q9Y242 345 aa8.27□□□□□ -1.09
USP3-219ENST00000561326 BOLA1Q9Y3E2 137 aa8.27□□□□□ -1.09
USP3-219ENST00000561326 STRAPQ9Y3F4 350 aaKnown RBP8.27□□□□□ -1.09
USP3-219ENST00000561326 U3KQ87 197 aa8.27□□□□□ -1.09
USP3-219ENST00000561326 TEX50A0A1B0GTY4 177 aa8.26□□□□□ -1.09
USP3-219ENST00000561326 A0A1W2PN81 502 aa8.26□□□□□ -1.09
USP3-219ENST00000561326 FAM24AA6NFZ4 105 aa8.26□□□□□ -1.09
USP3-219ENST00000561326 NCBP2LA6PVI3 153 aaKnown RBP8.26□□□□□ -1.09
USP3-219ENST00000561326 AVPP01185 164 aa8.26□□□□□ -1.09
USP3-219ENST00000561326 CRYGBP07316 175 aa8.26□□□□□ -1.09
USP3-219ENST00000561326 IAPPP10997 89 aa8.26□□□□□ -1.09
USP3-219ENST00000561326 CHRNA7P36544 502 aa8.26□□□□□ -1.09
USP3-219ENST00000561326 HOXA1P49639 335 aaPredicted RBP8.26□□□□□ -1.09
USP3-219ENST00000561326 PAX9P55771 341 aa8.26□□□□□ -1.09
USP3-219ENST00000561326 EIF5AP63241 154 aaKnown RBP8.26□□□□□ -1.09
USP3-219ENST00000561326 ERHP84090 104 aaKnown RBP8.26□□□□□ -1.09
USP3-219ENST00000561326 BAXQ07812 192 aa8.26□□□□□ -1.09
USP3-219ENST00000561326 AANATQ16613 207 aa8.26□□□□□ -1.09
USP3-219ENST00000561326 PRSS8Q16651 343 aa8.26□□□□□ -1.09
USP3-219ENST00000561326 SPANXN5Q5MJ07 72 aa8.26□□□□□ -1.09
USP3-219ENST00000561326 RUSC1-AS1Q66K80 236 aa8.26□□□□□ -1.09
USP3-219ENST00000561326 SLC51BQ86UW2 128 aa8.26□□□□□ -1.09
USP3-219ENST00000561326 TMEM252Q8N6L7 170 aa8.26□□□□□ -1.09
USP3-219ENST00000561326 ARPC5LQ9BPX5 153 aa8.26□□□□□ -1.09
USP3-219ENST00000561326 C11orf1Q9H5F2 150 aa8.26□□□□□ -1.09
USP3-219ENST00000561326 SLA2Q9H6Q3 261 aa8.26□□□□□ -1.09
USP3-219ENST00000561326 ZNF430Q9H8G1 570 aaPredicted RBP8.26□□□□□ -1.09
USP3-219ENST00000561326 PLEKHA3Q9HB20 300 aa8.26□□□□□ -1.09
USP3-219ENST00000561326 PLSCR3Q9NRY6 295 aa8.26□□□□□ -1.09
USP3-219ENST00000561326 FLNAP21333 2647 aaKnown RBP8.26□□□□□ -1.09
USP3-219ENST00000561326 MYO9AB2RTY4 2548 aa8.25□□□□□ -1.09
USP3-219ENST00000561326 BORCS7-ASMTA0A0B4J1R7 106 aa8.25□□□□□ -1.09
USP3-219ENST00000561326 A0A0U1RQK1 487 aa8.25□□□□□ -1.09
USP3-219ENST00000561326 KCNAB3O43448 404 aa8.25□□□□□ -1.09
USP3-219ENST00000561326 BCL2L11O43521 198 aa8.25□□□□□ -1.09
USP3-219ENST00000561326 NDUFA3O95167 84 aa8.25□□□□□ -1.09
USP3-219ENST00000561326 CNIH1O95406 144 aa8.25□□□□□ -1.09
USP3-219ENST00000561326 IFNA10P01566 189 aa8.25□□□□□ -1.09
USP3-219ENST00000561326 CD24P25063 80 aa8.25□□□□□ -1.09
USP3-219ENST00000561326 CNTFRP26992 372 aa8.25□□□□□ -1.09
USP3-219ENST00000561326 SNCAP37840 140 aa8.25□□□□□ -1.09
USP3-219ENST00000561326 SULT1A1P50225 295 aa8.25□□□□□ -1.09
USP3-219ENST00000561326 SUB1P53999 127 aaKnown RBP eCLIP8.25□□□□□ -1.09
USP3-219ENST00000561326 RAB11AP62491 216 aa8.25□□□□□ -1.09
USP3-219ENST00000561326 HBG1P69891 147 aa8.25□□□□□ -1.09
USP3-219ENST00000561326 HBG2P69892 147 aa8.25□□□□□ -1.09
USP3-219ENST00000561326 PRCDQ00LT1 54 aa8.25□□□□□ -1.09
USP3-219ENST00000561326 C5orf64Q2M2E5 130 aa8.25□□□□□ -1.09
USP3-219ENST00000561326 LRRC75BQ2VPJ9 315 aa8.25□□□□□ -1.09
USP3-219ENST00000561326 KLF17Q5JT82 389 aaPredicted RBP8.25□□□□□ -1.09
USP3-219ENST00000561326 OR1S2Q8NGQ3 325 aa8.25□□□□□ -1.09
USP3-219ENST00000561326 SSX3Q99909 188 aa8.25□□□□□ -1.09
USP3-219ENST00000561326 FBXL15Q9H469 300 aa8.25□□□□□ -1.09
USP3-219ENST00000561326 PITPNC1Q9UKF7 332 aa8.25□□□□□ -1.09
USP3-219ENST00000561326 PAIP2BQ9ULR5 123 aaKnown RBP8.25□□□□□ -1.09
USP3-219ENST00000561326 NAV3Q8IVL0 2385 aa8.24□□□□□ -1.09
USP3-219ENST00000561326 MSGN1A6NI15 193 aa8.24□□□□□ -1.09
USP3-219ENST00000561326 JTBO76095 146 aa8.24□□□□□ -1.09
USP3-219ENST00000561326 TMEM50AO95807 157 aa8.24□□□□□ -1.09
USP3-219ENST00000561326 PAX6P26367 422 aa8.24□□□□□ -1.09
USP3-219ENST00000561326 HTR2BP41595 481 aa8.24□□□□□ -1.09
USP3-219ENST00000561326 RPL27AP46776 148 aaKnown RBP8.24□□□□□ -1.09
USP3-219ENST00000561326 EWSR1Q01844 656 aaKnown RBP eCLIP8.24□□□□□ -1.09
USP3-219ENST00000561326 NHLH2Q02577 135 aa8.24□□□□□ -1.09
USP3-219ENST00000561326 PJVKQ0ZLH3 352 aa8.24□□□□□ -1.09
USP3-219ENST00000561326 TNXAQ16473 311 aa8.24□□□□□ -1.09
USP3-219ENST00000561326 ATP6V1FQ16864 119 aa8.24□□□□□ -1.09
USP3-219ENST00000561326 SPINK9Q5DT21 86 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms