RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 OR9G9P0C7N8 305 aa8.45□□□□□ -1.06
TPM1-229ENST00000561242 ZNF735P0CB33 412 aa8.45□□□□□ -1.06
TPM1-229ENST00000561242 HOXA1P49639 335 aaPredicted RBP8.45□□□□□ -1.06
TPM1-229ENST00000561242 RPP30P78346 268 aaKnown RBP8.45□□□□□ -1.06
TPM1-229ENST00000561242 ATP5G2Q06055 141 aa8.45□□□□□ -1.06
TPM1-229ENST00000561242 DCTN2Q13561 401 aaKnown RBP8.45□□□□□ -1.06
TPM1-229ENST00000561242 PLET1Q6UQ28 207 aa8.45□□□□□ -1.06
TPM1-229ENST00000561242 Q6ZS46 218 aa8.45□□□□□ -1.06
TPM1-229ENST00000561242 UXS1Q8NBZ7 420 aa8.45□□□□□ -1.06
TPM1-229ENST00000561242 KLHL30-AS1Q8NEE0 82 aa8.45□□□□□ -1.06
TPM1-229ENST00000561242 OR1S1Q8NH92 325 aa8.45□□□□□ -1.06
TPM1-229ENST00000561242 FAM110DQ8TAY7 271 aaPredicted RBP8.45□□□□□ -1.06
TPM1-229ENST00000561242 IL22RA2Q969J5 263 aa8.45□□□□□ -1.06
TPM1-229ENST00000561242 TRIM63Q969Q1 353 aa8.45□□□□□ -1.06
TPM1-229ENST00000561242 USMG5Q96IX5 58 aa8.45□□□□□ -1.06
TPM1-229ENST00000561242 CITED2Q99967 270 aaPredicted RBP8.45□□□□□ -1.06
TPM1-229ENST00000561242 SRSF8Q9BRL6 282 aaKnown RBP8.45□□□□□ -1.06
TPM1-229ENST00000561242 WNT10AQ9GZT5 417 aa8.45□□□□□ -1.06
TPM1-229ENST00000561242 TMEM222Q9H0R3 208 aa8.45□□□□□ -1.06
TPM1-229ENST00000561242 AKIP1Q9NQ31 210 aa8.45□□□□□ -1.06
TPM1-229ENST00000561242 ZMAT5Q9UDW3 170 aaKnown RBP8.45□□□□□ -1.06
TPM1-229ENST00000561242 ZNF580Q9UK33 172 aa8.45□□□□□ -1.06
TPM1-229ENST00000561242 ABCA2Q9BZC7 2435 aa8.45□□□□□ -1.06
TPM1-229ENST00000561242 CEBPZOSA8MTT3 80 aa8.44□□□□□ -1.06
TPM1-229ENST00000561242 G3V318 75 aa8.44□□□□□ -1.06
TPM1-229ENST00000561242 ARPC1BO15143 372 aaKnown RBP8.44□□□□□ -1.06
TPM1-229ENST00000561242 MED6O75586 246 aa8.44□□□□□ -1.06
TPM1-229ENST00000561242 UPK1BO75841 260 aa8.44□□□□□ -1.06
TPM1-229ENST00000561242 NDUFB6O95139 128 aa8.44□□□□□ -1.06
TPM1-229ENST00000561242 IGLV2-23P01705 113 aa8.44□□□□□ -1.06
TPM1-229ENST00000561242 IGHG4P01861 327 aa8.44□□□□□ -1.06
TPM1-229ENST00000561242 HLA-AP01891 365 aaKnown RBP8.44□□□□□ -1.06
TPM1-229ENST00000561242 APELAP0DMC3 54 aa8.44□□□□□ -1.06
TPM1-229ENST00000561242 CD33P20138 364 aa8.44□□□□□ -1.06
TPM1-229ENST00000561242 UCP1P25874 307 aa8.44□□□□□ -1.06
TPM1-229ENST00000561242 RAB9AP51151 201 aa8.44□□□□□ -1.06
TPM1-229ENST00000561242 CCR6P51684 374 aa8.44□□□□□ -1.06
TPM1-229ENST00000561242 PJVKQ0ZLH3 352 aa8.44□□□□□ -1.06
TPM1-229ENST00000561242 SLC25A24Q6NUK1 477 aa8.44□□□□□ -1.06
TPM1-229ENST00000561242 PUSL1Q8N0Z8 303 aaKnown RBP8.44□□□□□ -1.06
TPM1-229ENST00000561242 LSM10Q969L4 123 aaKnown RBP8.44□□□□□ -1.06
TPM1-229ENST00000561242 C5orf30Q96GV9 206 aa8.44□□□□□ -1.06
TPM1-229ENST00000561242 CITED1Q99966 193 aa8.44□□□□□ -1.06
TPM1-229ENST00000561242 RTBDNQ9BSG5 229 aaPredicted RBP8.44□□□□□ -1.06
TPM1-229ENST00000561242 GPR61Q9BZJ8 451 aa8.44□□□□□ -1.06
TPM1-229ENST00000561242 C5orf66Q9H5L9 145 aa8.44□□□□□ -1.06
TPM1-229ENST00000561242 NUBP2Q9Y5Y2 271 aa8.44□□□□□ -1.06
TPM1-229ENST00000561242 DUXBA0A1W2PPF3 345 aa8.43□□□□□ -1.06
TPM1-229ENST00000561242 FAM223BA6NKX1 122 aa8.43□□□□□ -1.06
TPM1-229ENST00000561242 LINC01548A6NM66 108 aa8.43□□□□□ -1.06
TPM1-229ENST00000561242 CRYGBP07316 175 aa8.43□□□□□ -1.06
TPM1-229ENST00000561242 H2AFB2P0C5Z0 115 aa8.43□□□□□ -1.06
TPM1-229ENST00000561242 SULT1A3P0DMM9 295 aa8.43□□□□□ -1.06
TPM1-229ENST00000561242 SULT1A4P0DMN0 295 aa8.43□□□□□ -1.06
TPM1-229ENST00000561242 OR13C7P0DN81 318 aa8.43□□□□□ -1.06
TPM1-229ENST00000561242 EIF4EBP1Q13541 118 aaPredicted RBP8.43□□□□□ -1.06
TPM1-229ENST00000561242 POU2AF1Q16633 256 aa8.43□□□□□ -1.06
TPM1-229ENST00000561242 FAM223AQ8IWN6 122 aa8.43□□□□□ -1.06
TPM1-229ENST00000561242 CADM3Q8N126 398 aa8.43□□□□□ -1.06
TPM1-229ENST00000561242 ADAD2Q8NCV1 583 aaKnown RBP8.43□□□□□ -1.06
TPM1-229ENST00000561242 GALNT14Q96FL9 552 aa8.43□□□□□ -1.06
TPM1-229ENST00000561242 UBE2E2Q96LR5 201 aa8.43□□□□□ -1.06
TPM1-229ENST00000561242 TP53RKQ96S44 253 aa8.43□□□□□ -1.06
TPM1-229ENST00000561242 TPSG1Q9NRR2 321 aa8.43□□□□□ -1.06
TPM1-229ENST00000561242 ZNF257Q9Y2Q1 563 aa8.43□□□□□ -1.06
TPM1-229ENST00000561242 NSG2Q9Y328 171 aa8.43□□□□□ -1.06
TPM1-229ENST00000561242 MTORP42345 2549 aa8.42□□□□□ -1.06
TPM1-229ENST00000561242 A0A0B4J2A0 478 aa8.42□□□□□ -1.06
TPM1-229ENST00000561242 SFT2D2O95562 160 aa8.42□□□□□ -1.06
TPM1-229ENST00000561242 CDS2O95674 445 aa8.42□□□□□ -1.06
TPM1-229ENST00000561242 TCRBP04435 133 aa8.42□□□□□ -1.06
TPM1-229ENST00000561242 MYCNOSP40205 109 aa8.42□□□□□ -1.06
TPM1-229ENST00000561242 CDX1P47902 265 aaPredicted RBP8.42□□□□□ -1.06
TPM1-229ENST00000561242 OR2B8PP59922 312 aa8.42□□□□□ -1.06
TPM1-229ENST00000561242 HSPE1P61604 102 aaKnown RBP8.42□□□□□ -1.06
TPM1-229ENST00000561242 RPL23AP62750 156 aaKnown RBP8.42□□□□□ -1.06
TPM1-229ENST00000561242 CD83Q01151 205 aa8.42□□□□□ -1.06
TPM1-229ENST00000561242 ZNF585BQ52M93 769 aa8.42□□□□□ -1.06
TPM1-229ENST00000561242 LCNL1Q6ZST4 164 aa8.42□□□□□ -1.06
TPM1-229ENST00000561242 TTC9CQ8N5M4 171 aa8.42□□□□□ -1.06
TPM1-229ENST00000561242 EEF1AKMT3Q96AZ1 226 aa8.42□□□□□ -1.06
TPM1-229ENST00000561242 CXorf58Q96LI9 332 aa8.42□□□□□ -1.06
TPM1-229ENST00000561242 MCRIP2Q9BUT9 160 aaKnown RBP8.42□□□□□ -1.06
TPM1-229ENST00000561242 PALMDQ9NP74 551 aa8.42□□□□□ -1.06
TPM1-229ENST00000561242 HEYLQ9NQ87 328 aaPredicted RBP8.42□□□□□ -1.06
TPM1-229ENST00000561242 GAR1Q9NY12 217 aaKnown RBP8.42□□□□□ -1.06
TPM1-229ENST00000561242 SHPKQ9UHJ6 478 aa8.42□□□□□ -1.06
TPM1-229ENST00000561242 TMED3Q9Y3Q3 217 aa8.42□□□□□ -1.06
TPM1-229ENST00000561242 TEP1Q99973 2627 aaKnown RBP8.41□□□□□ -1.06
TPM1-229ENST00000561242 C2CD3Q4AC94 2353 aa8.41□□□□□ -1.06
TPM1-229ENST00000561242 TRAV6A0A075B6T7 132 aa8.41□□□□□ -1.06
TPM1-229ENST00000561242 TEX50A0A1B0GTY4 177 aa8.41□□□□□ -1.06
TPM1-229ENST00000561242 A0A1B0GU03 582 aa8.41□□□□□ -1.06
TPM1-229ENST00000561242 HMX3A6NHT5 357 aa8.41□□□□□ -1.06
TPM1-229ENST00000561242 C15orf61A6NNL5 157 aa8.41□□□□□ -1.06
TPM1-229ENST00000561242 FAM25EA8MYX2 175 aa8.41□□□□□ -1.06
TPM1-229ENST00000561242 CORTO00230 105 aa8.41□□□□□ -1.06
TPM1-229ENST00000561242 LY86O95711 162 aa8.41□□□□□ -1.06
TPM1-229ENST00000561242 RPLP1P05386 114 aaKnown RBP8.41□□□□□ -1.06
TPM1-229ENST00000561242 OR4E1P0C645 316 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms