RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 VSIG4Q9Y279 399 aa9.48□□□□□ -0.89
RABGGTA-215ENST00000560207 A0A0G2JLM5 398 aa9.47□□□□□ -0.89
RABGGTA-215ENST00000560207 TCRBV4S1A1TA0A5B7 111 aa9.47□□□□□ -0.89
RABGGTA-215ENST00000560207 PLA2G10O15496 165 aa9.47□□□□□ -0.89
RABGGTA-215ENST00000560207 IGLV1-40P01703 118 aa9.47□□□□□ -0.89
RABGGTA-215ENST00000560207 G6PCP35575 357 aa9.47□□□□□ -0.89
RABGGTA-215ENST00000560207 TMEM95Q3KNT9 176 aa9.47□□□□□ -0.89
RABGGTA-215ENST00000560207 TMED4Q7Z7H5 227 aa9.47□□□□□ -0.89
RABGGTA-215ENST00000560207 VKORC1L1Q8N0U8 176 aa9.47□□□□□ -0.89
RABGGTA-215ENST00000560207 LRTM2Q8N967 370 aa9.47□□□□□ -0.89
RABGGTA-215ENST00000560207 LFNGQ8NES3 379 aa9.47□□□□□ -0.89
RABGGTA-215ENST00000560207 OR4F17Q8NGA8 305 aa9.47□□□□□ -0.89
RABGGTA-215ENST00000560207 OR1L6Q8NGR2 347 aa9.47□□□□□ -0.89
RABGGTA-215ENST00000560207 OR1L8Q8NGR8 309 aa9.47□□□□□ -0.89
RABGGTA-215ENST00000560207 RNASE11Q8TAA1 199 aaKnown RBP9.47□□□□□ -0.89
RABGGTA-215ENST00000560207 GRPEL2Q8TAA5 225 aa9.47□□□□□ -0.89
RABGGTA-215ENST00000560207 NOL4LQ96MY1 436 aaPredicted RBP9.47□□□□□ -0.89
RABGGTA-215ENST00000560207 OR4F4Q96R69 305 aa9.47□□□□□ -0.89
RABGGTA-215ENST00000560207 PDCD10Q9BUL8 212 aa9.47□□□□□ -0.89
RABGGTA-215ENST00000560207 PALMDQ9NP74 551 aa9.47□□□□□ -0.89
RABGGTA-215ENST00000560207 COA4Q9NYJ1 87 aa9.47□□□□□ -0.89
RABGGTA-215ENST00000560207 TENM1Q9UKZ4 2725 aa9.47□□□□□ -0.89
RABGGTA-215ENST00000560207 A0A0B4J2A0 478 aa9.46□□□□□ -0.9
RABGGTA-215ENST00000560207 LINC00854A0A1B0GVQ3 168 aa9.46□□□□□ -0.9
RABGGTA-215ENST00000560207 MSGN1A6NI15 193 aa9.46□□□□□ -0.9
RABGGTA-215ENST00000560207 LINC01548A6NM66 108 aa9.46□□□□□ -0.9
RABGGTA-215ENST00000560207 C15orf61A6NNL5 157 aa9.46□□□□□ -0.9
RABGGTA-215ENST00000560207 ARPC1BO15143 372 aaKnown RBP9.46□□□□□ -0.9
RABGGTA-215ENST00000560207 RBMXL2O75526 392 aaKnown RBP9.46□□□□□ -0.9
RABGGTA-215ENST00000560207 TCRBP04435 133 aa9.46□□□□□ -0.9
RABGGTA-215ENST00000560207 OR9G9P0C7N8 305 aa9.46□□□□□ -0.9
RABGGTA-215ENST00000560207 TRAPPC2P0DI81 140 aa9.46□□□□□ -0.9
RABGGTA-215ENST00000560207 TRAPPC2BP0DI82 140 aa9.46□□□□□ -0.9
RABGGTA-215ENST00000560207 HIST1H1BP16401 226 aaKnown RBP9.46□□□□□ -0.9
RABGGTA-215ENST00000560207 VAMP1P23763 118 aa9.46□□□□□ -0.9
RABGGTA-215ENST00000560207 PSMB8P28062 276 aa9.46□□□□□ -0.9
RABGGTA-215ENST00000560207 CDX1P47902 265 aaPredicted RBP9.46□□□□□ -0.9
RABGGTA-215ENST00000560207 CCR6P51684 374 aa9.46□□□□□ -0.9
RABGGTA-215ENST00000560207 PJVKQ0ZLH3 352 aa9.46□□□□□ -0.9
RABGGTA-215ENST00000560207 ECSCRQ19T08 205 aa9.46□□□□□ -0.9
RABGGTA-215ENST00000560207 C19orf54Q5BKX5 351 aa9.46□□□□□ -0.9
RABGGTA-215ENST00000560207 TTC9CQ8N5M4 171 aa9.46□□□□□ -0.9
RABGGTA-215ENST00000560207 FAM110DQ8TAY7 271 aaPredicted RBP9.46□□□□□ -0.9
RABGGTA-215ENST00000560207 ENKURQ8TC29 256 aa9.46□□□□□ -0.9
RABGGTA-215ENST00000560207 TAF15Q92804 592 aaKnown RBP eCLIP9.46□□□□□ -0.9
RABGGTA-215ENST00000560207 TMEM230Q96A57 120 aa9.46□□□□□ -0.9
RABGGTA-215ENST00000560207 UBE2E2Q96LR5 201 aa9.46□□□□□ -0.9
RABGGTA-215ENST00000560207 QTRT1Q9BXR0 403 aaKnown RBP9.46□□□□□ -0.9
RABGGTA-215ENST00000560207 TPSG1Q9NRR2 321 aa9.46□□□□□ -0.9
RABGGTA-215ENST00000560207 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.46□□□□□ -0.9
RABGGTA-215ENST00000560207 TMEM14BQ9NUH8 114 aa9.46□□□□□ -0.9
RABGGTA-215ENST00000560207 SHPKQ9UHJ6 478 aa9.46□□□□□ -0.9
RABGGTA-215ENST00000560207 TMED3Q9Y3Q3 217 aa9.46□□□□□ -0.9
RABGGTA-215ENST00000560207 A0A1W2PN81 502 aa9.45□□□□□ -0.9
RABGGTA-215ENST00000560207 NPIPB5A8MRT5 1133 aa9.45□□□□□ -0.9
RABGGTA-215ENST00000560207 SFT2D2O95562 160 aa9.45□□□□□ -0.9
RABGGTA-215ENST00000560207 EGR2P11161 476 aaPredicted RBP9.45□□□□□ -0.9
RABGGTA-215ENST00000560207 SLC25A6P12236 298 aa9.45□□□□□ -0.9
RABGGTA-215ENST00000560207 CHRNA7P36544 502 aa9.45□□□□□ -0.9
RABGGTA-215ENST00000560207 OR2B8PP59922 312 aa9.45□□□□□ -0.9
RABGGTA-215ENST00000560207 HSPE1P61604 102 aaKnown RBP9.45□□□□□ -0.9
RABGGTA-215ENST00000560207 NDPQ00604 133 aa9.45□□□□□ -0.9
RABGGTA-215ENST00000560207 TMEM187Q14656 261 aa9.45□□□□□ -0.9
RABGGTA-215ENST00000560207 MRGPRG-AS1Q2M3A8 158 aa9.45□□□□□ -0.9
RABGGTA-215ENST00000560207 SP6Q3SY56 376 aa9.45□□□□□ -0.9
RABGGTA-215ENST00000560207 TMEM268Q5VZI3 342 aa9.45□□□□□ -0.9
RABGGTA-215ENST00000560207 ZNF329Q86UD4 541 aa9.45□□□□□ -0.9
RABGGTA-215ENST00000560207 SELENOHQ8IZQ5 122 aaKnown RBP9.45□□□□□ -0.9
RABGGTA-215ENST00000560207 ADAD2Q8NCV1 583 aaKnown RBP9.45□□□□□ -0.9
RABGGTA-215ENST00000560207 OR52E5Q8NH55 327 aa9.45□□□□□ -0.9
RABGGTA-215ENST00000560207 COQ8AQ8NI60 647 aa9.45□□□□□ -0.9
RABGGTA-215ENST00000560207 USMG5Q96IX5 58 aa9.45□□□□□ -0.9
RABGGTA-215ENST00000560207 THYN1Q9P016 225 aa9.45□□□□□ -0.9
RABGGTA-215ENST00000560207 OR51B2Q9Y5P1 312 aa9.45□□□□□ -0.9
RABGGTA-215ENST00000560207 WSB1Q9Y6I7 421 aa9.45□□□□□ -0.9
RABGGTA-215ENST00000560207 INS-IGF2F8WCM5 200 aa9.44□□□□□ -0.9
RABGGTA-215ENST00000560207 G3V318 75 aa9.44□□□□□ -0.9
RABGGTA-215ENST00000560207 DUS4LO95620 317 aaKnown RBP9.44□□□□□ -0.9
RABGGTA-215ENST00000560207 LY86O95711 162 aa9.44□□□□□ -0.9
RABGGTA-215ENST00000560207 IGKV1-39P01597 117 aa9.44□□□□□ -0.9
RABGGTA-215ENST00000560207 HLA-AP01891 365 aaKnown RBP9.44□□□□□ -0.9
RABGGTA-215ENST00000560207 IGKV1D-39P04432 117 aa9.44□□□□□ -0.9
RABGGTA-215ENST00000560207 CRYGCP07315 174 aa9.44□□□□□ -0.9
RABGGTA-215ENST00000560207 OR4E1P0C645 316 aa9.44□□□□□ -0.9
RABGGTA-215ENST00000560207 P0C879 139 aa9.44□□□□□ -0.9
RABGGTA-215ENST00000560207 PF4V1P10720 104 aa9.44□□□□□ -0.9
RABGGTA-215ENST00000560207 CD28P10747 220 aa9.44□□□□□ -0.9
RABGGTA-215ENST00000560207 BTCP35070 178 aa9.44□□□□□ -0.9
RABGGTA-215ENST00000560207 RAB9AP51151 201 aa9.44□□□□□ -0.9
RABGGTA-215ENST00000560207 MECP2P51608 486 aaKnown RBP9.44□□□□□ -0.9
RABGGTA-215ENST00000560207 SUPT4H1P63272 117 aaKnown RBP9.44□□□□□ -0.9
RABGGTA-215ENST00000560207 SSBP2P81877 361 aaPredicted RBP9.44□□□□□ -0.9
RABGGTA-215ENST00000560207 AARDQ4LEZ3 155 aa9.44□□□□□ -0.9
RABGGTA-215ENST00000560207 C4orf46Q504U0 113 aa9.44□□□□□ -0.9
RABGGTA-215ENST00000560207 DUSP18Q8NEJ0 188 aa9.44□□□□□ -0.9
RABGGTA-215ENST00000560207 MYOZ3Q8TDC0 251 aa9.44□□□□□ -0.9
RABGGTA-215ENST00000560207 C20orf85Q9H1P6 137 aa9.44□□□□□ -0.9
RABGGTA-215ENST00000560207 NDUFA4L2Q9NRX3 87 aa9.44□□□□□ -0.9
RABGGTA-215ENST00000560207 LINC00527Q9UJ94 153 aa9.44□□□□□ -0.9
RABGGTA-215ENST00000560207 TEX50A0A1B0GTY4 177 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms