RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 OR8H3Q8N146 312 aa13.29□□□□□ -0.28
TPM1-219ENST00000559397 C22orf15Q8WYQ4 148 aa13.29□□□□□ -0.28
TPM1-219ENST00000559397 RHOVQ96L33 236 aa13.29□□□□□ -0.28
TPM1-219ENST00000559397 MEGF9Q9H1U4 602 aa13.29□□□□□ -0.28
TPM1-219ENST00000559397 RBKSQ9H477 322 aa13.29□□□□□ -0.28
TPM1-219ENST00000559397 TMEM140Q9NV12 185 aa13.29□□□□□ -0.28
TPM1-219ENST00000559397 HILPDAQ9Y5L2 63 aa13.29□□□□□ -0.28
TPM1-219ENST00000559397 NAV3Q8IVL0 2385 aa13.29□□□□□ -0.28
TPM1-219ENST00000559397 TXNL1O43396 289 aa13.28□□□□□ -0.28
TPM1-219ENST00000559397 ATP6V1G1O75348 118 aa13.28□□□□□ -0.28
TPM1-219ENST00000559397 APOA2P02652 100 aa13.28□□□□□ -0.28
TPM1-219ENST00000559397 IGKV1-16P04430 117 aa13.28□□□□□ -0.28
TPM1-219ENST00000559397 REG1BP48304 166 aa13.28□□□□□ -0.28
TPM1-219ENST00000559397 RELBQ01201 579 aa13.28□□□□□ -0.28
TPM1-219ENST00000559397 PDLIM3Q53GG5 364 aaPredicted RBP13.28□□□□□ -0.28
TPM1-219ENST00000559397 RPL7L1Q6DKI1 246 aaKnown RBP13.28□□□□□ -0.28
TPM1-219ENST00000559397 TGIF2LXQ8IUE1 241 aa13.28□□□□□ -0.28
TPM1-219ENST00000559397 BAP18Q8IXM2 172 aa13.28□□□□□ -0.28
TPM1-219ENST00000559397 VKORC1L1Q8N0U8 176 aa13.28□□□□□ -0.28
TPM1-219ENST00000559397 RPEQ96AT9 228 aa13.28□□□□□ -0.28
TPM1-219ENST00000559397 OOSP1A8MZH6 123 aa13.28□□□□□ -0.28
TPM1-219ENST00000559397 JTBO76095 146 aa13.28□□□□□ -0.28
TPM1-219ENST00000559397 EIF5AP63241 154 aaKnown RBP13.28□□□□□ -0.28
TPM1-219ENST00000559397 BAXQ07812 192 aa13.28□□□□□ -0.28
TPM1-219ENST00000559397 TMEM177Q53S58 311 aa13.28□□□□□ -0.28
TPM1-219ENST00000559397 SSX9Q7RTT3 188 aa13.28□□□□□ -0.28
TPM1-219ENST00000559397 PDPNQ86YL7 162 aa13.28□□□□□ -0.28
TPM1-219ENST00000559397 SLC7A5P1Q8MH63 180 aa13.28□□□□□ -0.28
TPM1-219ENST00000559397 OR52E5Q8NH55 327 aa13.28□□□□□ -0.28
TPM1-219ENST00000559397 OSR1Q8TAX0 266 aaPredicted RBP13.28□□□□□ -0.28
TPM1-219ENST00000559397 ZNF48Q96MX3 618 aaPredicted RBP13.28□□□□□ -0.28
TPM1-219ENST00000559397 ARV1Q9H2C2 271 aa13.28□□□□□ -0.28
TPM1-219ENST00000559397 WFDC1Q9HC57 220 aa13.28□□□□□ -0.28
TPM1-219ENST00000559397 CACFD1Q9UGQ2 172 aa13.28□□□□□ -0.28
TPM1-219ENST00000559397 FN1P02751 2386 aaKnown RBP13.27□□□□□ -0.29
TPM1-219ENST00000559397 MDFIC2A0A1B0GVS7 189 aa13.27□□□□□ -0.29
TPM1-219ENST00000559397 A0A1W2PPI3 338 aa13.27□□□□□ -0.29
TPM1-219ENST00000559397 IAPPP10997 89 aa13.27□□□□□ -0.29
TPM1-219ENST00000559397 DEFB112Q30KQ8 113 aa13.27□□□□□ -0.29
TPM1-219ENST00000559397 OR4A47Q6IF82 309 aa13.27□□□□□ -0.29
TPM1-219ENST00000559397 ZNF429Q86V71 674 aa13.27□□□□□ -0.29
TPM1-219ENST00000559397 UBAC2Q8NBM4 344 aa13.27□□□□□ -0.29
TPM1-219ENST00000559397 AIFM2Q9BRQ8 373 aa13.27□□□□□ -0.29
TPM1-219ENST00000559397 QTRT1Q9BXR0 403 aaKnown RBP13.27□□□□□ -0.29
TPM1-219ENST00000559397 SMIM3Q9BZL3 60 aa13.27□□□□□ -0.29
TPM1-219ENST00000559397 PSENENQ9NZ42 101 aa13.27□□□□□ -0.29
TPM1-219ENST00000559397 FAM96BQ9Y3D0 163 aa13.27□□□□□ -0.29
TPM1-219ENST00000559397 TRAV3A0A0B4J244 114 aa13.26□□□□□ -0.29
TPM1-219ENST00000559397 SRRM4A7MD48 611 aaKnown RBP13.26□□□□□ -0.29
TPM1-219ENST00000559397 FBP1P09467 338 aa13.26□□□□□ -0.29
TPM1-219ENST00000559397 SRD5A1P18405 259 aa13.26□□□□□ -0.29
TPM1-219ENST00000559397 MC5RP33032 325 aa13.26□□□□□ -0.29
TPM1-219ENST00000559397 OR4A16Q8NH70 328 aa13.26□□□□□ -0.29
TPM1-219ENST00000559397 PRDM13Q9H4Q3 707 aa13.26□□□□□ -0.29
TPM1-219ENST00000559397 WASHC3Q9Y3C0 194 aa13.26□□□□□ -0.29
TPM1-219ENST00000559397 MTORP42345 2549 aa13.26□□□□□ -0.29
TPM1-219ENST00000559397 IGHV1-3A0A0C4DH29 117 aa13.25□□□□□ -0.29
TPM1-219ENST00000559397 LINC00862A6NCI5 91 aa13.25□□□□□ -0.29
TPM1-219ENST00000559397 C15orf61A6NNL5 157 aa13.25□□□□□ -0.29
TPM1-219ENST00000559397 RAB13P51153 203 aa13.25□□□□□ -0.29
TPM1-219ENST00000559397 OR2B8PP59922 312 aa13.25□□□□□ -0.29
TPM1-219ENST00000559397 SPCS3P61009 180 aa13.25□□□□□ -0.29
TPM1-219ENST00000559397 RAB14P61106 215 aa13.25□□□□□ -0.29
TPM1-219ENST00000559397 CCDC144NLQ6NUI1 221 aa13.25□□□□□ -0.29
TPM1-219ENST00000559397 STPG2Q8N412 459 aa13.25□□□□□ -0.29
TPM1-219ENST00000559397 TMEM14BQ9NUH8 114 aa13.25□□□□□ -0.29
TPM1-219ENST00000559397 BET1LQ9NYM9 111 aa13.25□□□□□ -0.29
TPM1-219ENST00000559397 FOXA2Q9Y261 457 aaPredicted RBP13.25□□□□□ -0.29
TPM1-219ENST00000559397 H3BP45 60 aa13.24□□□□□ -0.29
TPM1-219ENST00000559397 H7C2Y5 167 aa13.24□□□□□ -0.29
TPM1-219ENST00000559397 CRLF1O75462 422 aa13.24□□□□□ -0.29
TPM1-219ENST00000559397 RBMXL2O75526 392 aaKnown RBP13.24□□□□□ -0.29
TPM1-219ENST00000559397 CST7O76096 145 aa13.24□□□□□ -0.29
TPM1-219ENST00000559397 LY86O95711 162 aa13.24□□□□□ -0.29
TPM1-219ENST00000559397 NMBP08949 121 aa13.24□□□□□ -0.29
TPM1-219ENST00000559397 SULT1A1P50225 295 aa13.24□□□□□ -0.29
TPM1-219ENST00000559397 HABP2Q14520 560 aaPredicted RBP13.24□□□□□ -0.29
TPM1-219ENST00000559397 TMEM14EPQ6UXP3 125 aa13.24□□□□□ -0.29
TPM1-219ENST00000559397 PUSL1Q8N0Z8 303 aaKnown RBP13.24□□□□□ -0.29
TPM1-219ENST00000559397 OR4C13Q8NGP0 309 aa13.24□□□□□ -0.29
TPM1-219ENST00000559397 DTD1Q8TEA8 209 aa13.24□□□□□ -0.29
TPM1-219ENST00000559397 CFHR4Q92496 578 aa13.24□□□□□ -0.29
TPM1-219ENST00000559397 FLYWCH2Q96CP2 140 aaKnown RBP13.24□□□□□ -0.29
TPM1-219ENST00000559397 RBMXL1Q96E39 390 aaKnown RBP13.24□□□□□ -0.29
TPM1-219ENST00000559397 CIB3Q96Q77 187 aaPredicted RBP13.24□□□□□ -0.29
TPM1-219ENST00000559397 SLC25A32Q9H2D1 315 aa13.24□□□□□ -0.29
TPM1-219ENST00000559397 BORCS7-ASMTA0A0B4J1R7 106 aa13.24□□□□□ -0.29
TPM1-219ENST00000559397 UPK2O00526 184 aa13.24□□□□□ -0.29
TPM1-219ENST00000559397 TIMM23O14925 209 aa13.24□□□□□ -0.29
TPM1-219ENST00000559397 SHOXO15266 292 aa13.24□□□□□ -0.29
TPM1-219ENST00000559397 DYNLT3P51808 116 aa13.24□□□□□ -0.29
TPM1-219ENST00000559397 STX12Q86Y82 276 aa13.24□□□□□ -0.29
TPM1-219ENST00000559397 ZDHHC16Q969W1 377 aa13.24□□□□□ -0.29
TPM1-219ENST00000559397 HARBI1Q96MB7 349 aa13.24□□□□□ -0.29
TPM1-219ENST00000559397 SCGB2A2Q13296 93 aa13.23□□□□□ -0.29
TPM1-219ENST00000559397 AANATQ16613 207 aa13.23□□□□□ -0.29
TPM1-219ENST00000559397 Q6YL49 198 aa13.23□□□□□ -0.29
TPM1-219ENST00000559397 MOB3BQ86TA1 216 aa13.23□□□□□ -0.29
TPM1-219ENST00000559397 HAPLN4Q86UW8 402 aa13.23□□□□□ -0.29
TPM1-219ENST00000559397 OR5C1Q8NGR4 320 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms