RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 FUSP35637 526 aaKnown RBP eCLIP8.46□□□□□ -1.06
SMAD3-206ENST00000558739 HLA-DRB3P79483 266 aa8.46□□□□□ -1.06
SMAD3-206ENST00000558739 INSL4Q14641 139 aa8.46□□□□□ -1.06
SMAD3-206ENST00000558739 VMA21Q3ZAQ7 101 aa8.46□□□□□ -1.06
SMAD3-206ENST00000558739 OR10K2Q6IF99 312 aa8.46□□□□□ -1.06
SMAD3-206ENST00000558739 LRRTM1Q86UE6 522 aa8.46□□□□□ -1.06
SMAD3-206ENST00000558739 VKORC1L1Q8N0U8 176 aa8.46□□□□□ -1.06
SMAD3-206ENST00000558739 C6orf223Q8N319 242 aa8.46□□□□□ -1.06
SMAD3-206ENST00000558739 GBGT1Q8N5D6 347 aa8.46□□□□□ -1.06
SMAD3-206ENST00000558739 FAM24BQ8N5W8 94 aa8.46□□□□□ -1.06
SMAD3-206ENST00000558739 ZNF502Q8TBZ5 544 aa8.46□□□□□ -1.06
SMAD3-206ENST00000558739 PHYHIPQ92561 330 aa8.46□□□□□ -1.06
SMAD3-206ENST00000558739 RDH8Q9NYR8 311 aa8.46□□□□□ -1.06
SMAD3-206ENST00000558739 GHRLQ9UBU3 117 aa8.46□□□□□ -1.06
SMAD3-206ENST00000558739 RAB26Q9ULW5 256 aa8.46□□□□□ -1.06
SMAD3-206ENST00000558739 LINC00473A8K010 186 aa8.45□□□□□ -1.06
SMAD3-206ENST00000558739 PSMB6P28072 239 aa8.45□□□□□ -1.06
SMAD3-206ENST00000558739 XGP55808 180 aa8.45□□□□□ -1.06
SMAD3-206ENST00000558739 MLLT11Q13015 90 aaPredicted RBP8.45□□□□□ -1.06
SMAD3-206ENST00000558739 RTL8BQ17RB0 113 aa8.45□□□□□ -1.06
SMAD3-206ENST00000558739 RBM48Q5RL73 367 aaKnown RBP8.45□□□□□ -1.06
SMAD3-206ENST00000558739 C1orf100Q5SVJ3 147 aa8.45□□□□□ -1.06
SMAD3-206ENST00000558739 PLET1Q6UQ28 207 aa8.45□□□□□ -1.06
SMAD3-206ENST00000558739 TMEM91Q6ZNR0 172 aa8.45□□□□□ -1.06
SMAD3-206ENST00000558739 LYPD1Q8N2G4 141 aa8.45□□□□□ -1.06
SMAD3-206ENST00000558739 ZNF414Q96IQ9 312 aa8.45□□□□□ -1.06
SMAD3-206ENST00000558739 FYTTD1Q96QD9 318 aaKnown RBP8.45□□□□□ -1.06
SMAD3-206ENST00000558739 NICN1Q9BSH3 213 aa8.45□□□□□ -1.06
SMAD3-206ENST00000558739 C20orf24Q9BUV8 137 aa8.45□□□□□ -1.06
SMAD3-206ENST00000558739 ETV7Q9Y603 341 aa8.45□□□□□ -1.06
SMAD3-206ENST00000558739 LRP2P98164 4655 aa8.45□□□□□ -1.06
SMAD3-206ENST00000558739 IGLV11-55A0A075B6I3 123 aa8.44□□□□□ -1.06
SMAD3-206ENST00000558739 DPPA5A6NC42 116 aa8.44□□□□□ -1.06
SMAD3-206ENST00000558739 OR2T8A6NH00 312 aa8.44□□□□□ -1.06
SMAD3-206ENST00000558739 ACTL6BO94805 426 aa8.44□□□□□ -1.06
SMAD3-206ENST00000558739 SRMP19623 302 aa8.44□□□□□ -1.06
SMAD3-206ENST00000558739 TBCEQ15813 527 aaPredicted RBP8.44□□□□□ -1.06
SMAD3-206ENST00000558739 LIPKQ5VXJ0 399 aa8.44□□□□□ -1.06
SMAD3-206ENST00000558739 GLT8D1Q68CQ7 371 aa8.44□□□□□ -1.06
SMAD3-206ENST00000558739 SLC25A42Q86VD7 318 aa8.44□□□□□ -1.06
SMAD3-206ENST00000558739 CENPSQ8N2Z9 138 aa8.44□□□□□ -1.06
SMAD3-206ENST00000558739 UFD1Q92890 307 aa8.44□□□□□ -1.06
SMAD3-206ENST00000558739 IGHV3OR16-13A0A075B7E8 117 aa8.43□□□□□ -1.06
SMAD3-206ENST00000558739 IGHV3-74A0A0B4J1X5 117 aa8.43□□□□□ -1.06
SMAD3-206ENST00000558739 NBDYA0A0U1RRE5 68 aa8.43□□□□□ -1.06
SMAD3-206ENST00000558739 F8W735 103 aaPredicted RBP8.43□□□□□ -1.06
SMAD3-206ENST00000558739 TGOLN2O43493 480 aa8.43□□□□□ -1.06
SMAD3-206ENST00000558739 CRYGCP07315 174 aa8.43□□□□□ -1.06
SMAD3-206ENST00000558739 UBBP0CG47 229 aa8.43□□□□□ -1.06
SMAD3-206ENST00000558739 PSMA1P25786 263 aaKnown RBP8.43□□□□□ -1.06
SMAD3-206ENST00000558739 HTR2CP28335 458 aa8.43□□□□□ -1.06
SMAD3-206ENST00000558739 QRFPP83859 136 aa8.43□□□□□ -1.06
SMAD3-206ENST00000558739 CDK10Q15131 360 aa8.43□□□□□ -1.06
SMAD3-206ENST00000558739 TRAM1Q15629 374 aa8.43□□□□□ -1.06
SMAD3-206ENST00000558739 RNF212Q495C1 297 aa8.43□□□□□ -1.06
SMAD3-206ENST00000558739 HSD17B12Q53GQ0 312 aa8.43□□□□□ -1.06
SMAD3-206ENST00000558739 MOB1BQ7L9L4 216 aa8.43□□□□□ -1.06
SMAD3-206ENST00000558739 MMD2Q8IY49 270 aa8.43□□□□□ -1.06
SMAD3-206ENST00000558739 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.43□□□□□ -1.06
SMAD3-206ENST00000558739 GIMAP1Q8WWP7 306 aa8.43□□□□□ -1.06
SMAD3-206ENST00000558739 CNBD2Q96M20 576 aa8.43□□□□□ -1.06
SMAD3-206ENST00000558739 NEDD4LQ96PU5 975 aa8.43□□□□□ -1.06
SMAD3-206ENST00000558739 MGLLQ99685 303 aa8.43□□□□□ -1.06
SMAD3-206ENST00000558739 SLC2A9Q9NRM0 540 aa8.43□□□□□ -1.06
SMAD3-206ENST00000558739 A0A0A6YYD4 124 aa8.42□□□□□ -1.06
SMAD3-206ENST00000558739 TRBV7-1A0A0A6YYK4 115 aa8.42□□□□□ -1.06
SMAD3-206ENST00000558739 CGB1A6NKQ9 187 aa8.42□□□□□ -1.06
SMAD3-206ENST00000558739 DENRO43583 198 aaKnown RBP8.42□□□□□ -1.06
SMAD3-206ENST00000558739 MRPS14O60783 128 aaKnown RBP8.42□□□□□ -1.06
SMAD3-206ENST00000558739 ZNF735P0CB33 412 aa8.42□□□□□ -1.06
SMAD3-206ENST00000558739 DEFB131AP59861 70 aa8.42□□□□□ -1.06
SMAD3-206ENST00000558739 RPS25P62851 125 aaKnown RBP8.42□□□□□ -1.06
SMAD3-206ENST00000558739 CBX3Q13185 183 aa8.42□□□□□ -1.06
SMAD3-206ENST00000558739 OR2B11Q5JQS5 317 aa8.42□□□□□ -1.06
SMAD3-206ENST00000558739 CSNK1G2-AS1Q8NCQ2 148 aa8.42□□□□□ -1.06
SMAD3-206ENST00000558739 OR6M1Q8NGM8 313 aa8.42□□□□□ -1.06
SMAD3-206ENST00000558739 GFI1Q99684 422 aa8.42□□□□□ -1.06
SMAD3-206ENST00000558739 YTHDF1Q9BYJ9 559 aaKnown RBP8.42□□□□□ -1.06
SMAD3-206ENST00000558739 ACOT13Q9NPJ3 140 aa8.42□□□□□ -1.06
SMAD3-206ENST00000558739 AK3Q9UIJ7 227 aa8.42□□□□□ -1.06
SMAD3-206ENST00000558739 BLOC1S6Q9UL45 172 aa8.42□□□□□ -1.06
SMAD3-206ENST00000558739 TBC1D24Q9ULP9 559 aa8.42□□□□□ -1.06
SMAD3-206ENST00000558739 TMEM14DPA8MWL7 114 aa8.41□□□□□ -1.06
SMAD3-206ENST00000558739 RAB27BO00194 218 aa8.41□□□□□ -1.06
SMAD3-206ENST00000558739 SMR3BP02814 79 aaPredicted RBP8.41□□□□□ -1.06
SMAD3-206ENST00000558739 GSTT2P0CG29 244 aa8.41□□□□□ -1.06
SMAD3-206ENST00000558739 GSTT2BP0CG30 244 aa8.41□□□□□ -1.06
SMAD3-206ENST00000558739 HSMCR30P0CW71 290 aa8.41□□□□□ -1.06
SMAD3-206ENST00000558739 DUTP33316 252 aaKnown RBP8.41□□□□□ -1.06
SMAD3-206ENST00000558739 RPL27AP46776 148 aaKnown RBP8.41□□□□□ -1.06
SMAD3-206ENST00000558739 GABARAPL2P60520 117 aa8.41□□□□□ -1.06
SMAD3-206ENST00000558739 UNC119Q13432 240 aa8.41□□□□□ -1.06
SMAD3-206ENST00000558739 SSX1Q16384 188 aa8.41□□□□□ -1.06
SMAD3-206ENST00000558739 KLK9Q2XQG4 91 aa8.41□□□□□ -1.06
SMAD3-206ENST00000558739 FRZBQ92765 325 aa8.41□□□□□ -1.06
SMAD3-206ENST00000558739 TMEM203Q969S6 136 aa8.41□□□□□ -1.06
SMAD3-206ENST00000558739 TM2D1Q9BX74 207 aa8.41□□□□□ -1.06
SMAD3-206ENST00000558739 CCDC90BQ9GZT6 254 aa8.41□□□□□ -1.06
SMAD3-206ENST00000558739 KLK9Q9UKQ9 250 aa8.41□□□□□ -1.06
SMAD3-206ENST00000558739 DNAH8Q96JB1 4490 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms