RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 NPIPB5A8MRT5 1133 aa6.13□□□□□ -1.43
TRAF3-205ENST00000558700 BMPR1BO00238 502 aa6.13□□□□□ -1.43
TRAF3-205ENST00000558700 SSX5O60225 188 aa6.13□□□□□ -1.43
TRAF3-205ENST00000558700 DHFRP00374 187 aa6.13□□□□□ -1.43
TRAF3-205ENST00000558700 HRASP01112 189 aa6.13□□□□□ -1.43
TRAF3-205ENST00000558700 IGKV1-13P0DP09 117 aa6.13□□□□□ -1.43
TRAF3-205ENST00000558700 MAS1LP35410 378 aa6.13□□□□□ -1.43
TRAF3-205ENST00000558700 RPL27AP46776 148 aaKnown RBP6.13□□□□□ -1.43
TRAF3-205ENST00000558700 ZNF45Q02386 682 aa6.13□□□□□ -1.43
TRAF3-205ENST00000558700 MSMO1Q15800 293 aa6.13□□□□□ -1.43
TRAF3-205ENST00000558700 CASC10Q5T4H9 136 aa6.13□□□□□ -1.43
TRAF3-205ENST00000558700 IL34Q6ZMJ4 242 aa6.13□□□□□ -1.43
TRAF3-205ENST00000558700 LAX1Q8IWV1 398 aa6.13□□□□□ -1.43
TRAF3-205ENST00000558700 TTC9CQ8N5M4 171 aa6.13□□□□□ -1.43
TRAF3-205ENST00000558700 BEST4Q8NFU0 473 aa6.13□□□□□ -1.43
TRAF3-205ENST00000558700 OR13F1Q8NGS4 319 aa6.13□□□□□ -1.43
TRAF3-205ENST00000558700 OR2A7Q96R45 310 aa6.13□□□□□ -1.43
TRAF3-205ENST00000558700 AIFM2Q9BRQ8 373 aa6.13□□□□□ -1.43
TRAF3-205ENST00000558700 OR51E2Q9H255 320 aa6.13□□□□□ -1.43
TRAF3-205ENST00000558700 TAS2R8Q9NYW2 309 aa6.13□□□□□ -1.43
TRAF3-205ENST00000558700 SPATA2Q9UM82 520 aa6.13□□□□□ -1.43
TRAF3-205ENST00000558700 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.12□□□□□ -1.43
TRAF3-205ENST00000558700 LOC100506127A0A0U1RQW1 187 aa6.12□□□□□ -1.43
TRAF3-205ENST00000558700 TEX22C9J3V5 150 aa6.12□□□□□ -1.43
TRAF3-205ENST00000558700 RBMXL2O75526 392 aaKnown RBP6.12□□□□□ -1.43
TRAF3-205ENST00000558700 OR2J3O76001 311 aa6.12□□□□□ -1.43
TRAF3-205ENST00000558700 PPYP01298 95 aa6.12□□□□□ -1.43
TRAF3-205ENST00000558700 IGLV2-14P01704 120 aa6.12□□□□□ -1.43
TRAF3-205ENST00000558700 PRH1P02810 166 aa6.12□□□□□ -1.43
TRAF3-205ENST00000558700 CSN3P07498 182 aa6.12□□□□□ -1.43
TRAF3-205ENST00000558700 HIST1H1BP16401 226 aaKnown RBP6.12□□□□□ -1.43
TRAF3-205ENST00000558700 SDC2P34741 201 aa6.12□□□□□ -1.43
TRAF3-205ENST00000558700 CBX5P45973 191 aa6.12□□□□□ -1.43
TRAF3-205ENST00000558700 RPL30P62888 115 aaKnown RBP6.12□□□□□ -1.43
TRAF3-205ENST00000558700 RPL8P62917 257 aaKnown RBP6.12□□□□□ -1.43
TRAF3-205ENST00000558700 MXD1Q05195 221 aa6.12□□□□□ -1.43
TRAF3-205ENST00000558700 CATR1Q13166 79 aa6.12□□□□□ -1.43
TRAF3-205ENST00000558700 C15orf32Q32M92 178 aa6.12□□□□□ -1.43
TRAF3-205ENST00000558700 VKORC1L1Q8N0U8 176 aa6.12□□□□□ -1.43
TRAF3-205ENST00000558700 PUSL1Q8N0Z8 303 aaKnown RBP6.12□□□□□ -1.43
TRAF3-205ENST00000558700 OR4A5Q8NH83 315 aa6.12□□□□□ -1.43
TRAF3-205ENST00000558700 TMEM167AQ8TBQ9 72 aa6.12□□□□□ -1.43
TRAF3-205ENST00000558700 SECTM1Q8WVN6 248 aa6.12□□□□□ -1.43
TRAF3-205ENST00000558700 SLC25A38Q96DW6 304 aa6.12□□□□□ -1.43
TRAF3-205ENST00000558700 TUBA4BQ9H853 241 aa6.12□□□□□ -1.43
TRAF3-205ENST00000558700 DIABLOQ9NR28 239 aa6.12□□□□□ -1.43
TRAF3-205ENST00000558700 TRAV18A0A075B6X5 111 aa6.11□□□□□ -1.43
TRAF3-205ENST00000558700 SCO2A0A1W2PP80 73 aa6.11□□□□□ -1.43
TRAF3-205ENST00000558700 RBFOX2O43251 390 aaKnown RBP eCLIP6.11□□□□□ -1.43
TRAF3-205ENST00000558700 GGCTO75223 188 aaKnown RBP6.11□□□□□ -1.43
TRAF3-205ENST00000558700 TPPPO94811 219 aa6.11□□□□□ -1.43
TRAF3-205ENST00000558700 IFNA6P05013 189 aa6.11□□□□□ -1.43
TRAF3-205ENST00000558700 ZNF735P0CB33 412 aa6.11□□□□□ -1.43
TRAF3-205ENST00000558700 ARL3P36405 182 aa6.11□□□□□ -1.43
TRAF3-205ENST00000558700 CD81P60033 236 aa6.11□□□□□ -1.43
TRAF3-205ENST00000558700 EIF4EBP1Q13541 118 aaPredicted RBP6.11□□□□□ -1.43
TRAF3-205ENST00000558700 TIMM50Q3ZCQ8 353 aa6.11□□□□□ -1.43
TRAF3-205ENST00000558700 KCTD21Q4G0X4 260 aa6.11□□□□□ -1.43
TRAF3-205ENST00000558700 IDNKQ5T6J7 187 aa6.11□□□□□ -1.43
TRAF3-205ENST00000558700 SSX9Q7RTT3 188 aa6.11□□□□□ -1.43
TRAF3-205ENST00000558700 HOGA1Q86XE5 327 aa6.11□□□□□ -1.43
TRAF3-205ENST00000558700 ST8SIA2Q92186 375 aa6.11□□□□□ -1.43
TRAF3-205ENST00000558700 BORCS5Q969J3 196 aa6.11□□□□□ -1.43
TRAF3-205ENST00000558700 EEF1AKMT3Q96AZ1 226 aa6.11□□□□□ -1.43
TRAF3-205ENST00000558700 FYTTD1Q96QD9 318 aaKnown RBP6.11□□□□□ -1.43
TRAF3-205ENST00000558700 THAP7Q9BT49 309 aaPredicted RBP6.11□□□□□ -1.43
TRAF3-205ENST00000558700 AUNIPQ9H7T9 357 aa6.11□□□□□ -1.43
TRAF3-205ENST00000558700 IFT46Q9NQC8 304 aa6.11□□□□□ -1.43
TRAF3-205ENST00000558700 SLC2A9Q9NRM0 540 aa6.11□□□□□ -1.43
TRAF3-205ENST00000558700 SLC2A8Q9NY64 477 aa6.11□□□□□ -1.43
TRAF3-205ENST00000558700 BET1LQ9NYM9 111 aa6.11□□□□□ -1.43
TRAF3-205ENST00000558700 RYR3Q15413 4870 aa6.11□□□□□ -1.43
TRAF3-205ENST00000558700 IZUMO1RA6ND01 250 aa6.1□□□□□ -1.43
TRAF3-205ENST00000558700 C2orf70A6NJV1 201 aa6.1□□□□□ -1.43
TRAF3-205ENST00000558700 A8MWP6 167 aa6.1□□□□□ -1.43
TRAF3-205ENST00000558700 PPP5D1E7EU14 171 aa6.1□□□□□ -1.43
TRAF3-205ENST00000558700 LGALS9O00182 355 aa6.1□□□□□ -1.43
TRAF3-205ENST00000558700 TNFSF12O43508 249 aa6.1□□□□□ -1.43
TRAF3-205ENST00000558700 IL6RP08887 468 aaPredicted RBP6.1□□□□□ -1.43
TRAF3-205ENST00000558700 DEFA4P12838 97 aa6.1□□□□□ -1.43
TRAF3-205ENST00000558700 HLA-GP17693 338 aa6.1□□□□□ -1.43
TRAF3-205ENST00000558700 PI3P19957 117 aa6.1□□□□□ -1.43
TRAF3-205ENST00000558700 PSMB6P28072 239 aa6.1□□□□□ -1.43
TRAF3-205ENST00000558700 FCGR2CP31995 323 aa6.1□□□□□ -1.43
TRAF3-205ENST00000558700 TAS2R31P59538 309 aa6.1□□□□□ -1.43
TRAF3-205ENST00000558700 FXYD4P59646 89 aa6.1□□□□□ -1.43
TRAF3-205ENST00000558700 HERV-K104P61576 105 aa6.1□□□□□ -1.43
TRAF3-205ENST00000558700 NEDD8Q15843 81 aa6.1□□□□□ -1.43
TRAF3-205ENST00000558700 HAGHQ16775 308 aa6.1□□□□□ -1.43
TRAF3-205ENST00000558700 THOC7Q6I9Y2 204 aaKnown RBP6.1□□□□□ -1.43
TRAF3-205ENST00000558700 OR4A47Q6IF82 309 aa6.1□□□□□ -1.43
TRAF3-205ENST00000558700 TMEM17Q86X19 198 aa6.1□□□□□ -1.43
TRAF3-205ENST00000558700 CROCCP3Q8IVE0 287 aa6.1□□□□□ -1.43
TRAF3-205ENST00000558700 SPAG16Q8N0X2 631 aa6.1□□□□□ -1.43
TRAF3-205ENST00000558700 GVQW1Q8N7I0 195 aa6.1□□□□□ -1.43
TRAF3-205ENST00000558700 OR5H6Q8NGV6 325 aa6.1□□□□□ -1.43
TRAF3-205ENST00000558700 SLC5A7Q9GZV3 580 aa6.1□□□□□ -1.43
TRAF3-205ENST00000558700 EDA2RQ9HAV5 297 aa6.1□□□□□ -1.43
TRAF3-205ENST00000558700 PLEKHA3Q9HB20 300 aa6.1□□□□□ -1.43
TRAF3-205ENST00000558700 HRASLSQ9HDD0 168 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms