RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 ATP6V0E1O15342 81 aa11.12□□□□□ -0.63
SUPT16H-208ENST00000557652 ELANEP08246 267 aa11.12□□□□□ -0.63
SUPT16H-208ENST00000557652 RPL27AP46776 148 aaKnown RBP11.12□□□□□ -0.63
SUPT16H-208ENST00000557652 TNXAQ16473 311 aa11.12□□□□□ -0.63
SUPT16H-208ENST00000557652 MRGPRG-AS1Q2M3A8 158 aa11.12□□□□□ -0.63
SUPT16H-208ENST00000557652 AARDQ4LEZ3 155 aa11.12□□□□□ -0.63
SUPT16H-208ENST00000557652 C4orf46Q504U0 113 aa11.12□□□□□ -0.63
SUPT16H-208ENST00000557652 TMEM268Q5VZI3 342 aa11.12□□□□□ -0.63
SUPT16H-208ENST00000557652 TEX38Q6PEX7 206 aa11.12□□□□□ -0.63
SUPT16H-208ENST00000557652 Q6ZS46 218 aa11.12□□□□□ -0.63
SUPT16H-208ENST00000557652 NRARPQ7Z6K4 114 aa11.12□□□□□ -0.63
SUPT16H-208ENST00000557652 CENPVQ7Z7K6 275 aaPredicted RBP11.12□□□□□ -0.63
SUPT16H-208ENST00000557652 OR4X2Q8NGF9 303 aa11.12□□□□□ -0.63
SUPT16H-208ENST00000557652 OR5M8Q8NGP6 311 aa11.12□□□□□ -0.63
SUPT16H-208ENST00000557652 OR1L8Q8NGR8 309 aa11.12□□□□□ -0.63
SUPT16H-208ENST00000557652 OR4A16Q8NH70 328 aa11.12□□□□□ -0.63
SUPT16H-208ENST00000557652 SRSF12Q8WXF0 261 aaKnown RBP11.12□□□□□ -0.63
SUPT16H-208ENST00000557652 MARVELD1Q9BSK0 173 aa11.12□□□□□ -0.63
SUPT16H-208ENST00000557652 GPN1Q9HCN4 374 aaPredicted RBP11.12□□□□□ -0.63
SUPT16H-208ENST00000557652 PARP11Q9NR21 331 aa11.12□□□□□ -0.63
SUPT16H-208ENST00000557652 TPSG1Q9NRR2 321 aa11.12□□□□□ -0.63
SUPT16H-208ENST00000557652 TMEM14BQ9NUH8 114 aa11.12□□□□□ -0.63
SUPT16H-208ENST00000557652 FOXA2Q9Y261 457 aaPredicted RBP11.12□□□□□ -0.63
SUPT16H-208ENST00000557652 TRAV41A0A0B4J266 112 aa11.11□□□□□ -0.63
SUPT16H-208ENST00000557652 DHFRP00374 187 aa11.11□□□□□ -0.63
SUPT16H-208ENST00000557652 C19orf54Q5BKX5 351 aa11.11□□□□□ -0.63
SUPT16H-208ENST00000557652 KLHDC1Q8N7A1 406 aa11.11□□□□□ -0.63
SUPT16H-208ENST00000557652 RNF152Q8N8N0 203 aa11.11□□□□□ -0.63
SUPT16H-208ENST00000557652 MINDY2Q8NBR6 621 aa11.11□□□□□ -0.63
SUPT16H-208ENST00000557652 OR52E5Q8NH55 327 aa11.11□□□□□ -0.63
SUPT16H-208ENST00000557652 SPATA3Q8NHX4 192 aa11.11□□□□□ -0.63
SUPT16H-208ENST00000557652 ABHD5Q8WTS1 349 aa11.11□□□□□ -0.63
SUPT16H-208ENST00000557652 MITD1Q8WV92 249 aa11.11□□□□□ -0.63
SUPT16H-208ENST00000557652 CLCC1Q96S66 551 aa11.11□□□□□ -0.63
SUPT16H-208ENST00000557652 PHB2Q99623 299 aa11.11□□□□□ -0.63
SUPT16H-208ENST00000557652 ZNF747Q9BV97 191 aa11.11□□□□□ -0.63
SUPT16H-208ENST00000557652 FLVCR2Q9UPI3 526 aa11.11□□□□□ -0.63
SUPT16H-208ENST00000557652 FBN1P35555 2871 aaKnown RBP11.1□□□□□ -0.63
SUPT16H-208ENST00000557652 TRAV6A0A075B6T7 132 aa11.1□□□□□ -0.63
SUPT16H-208ENST00000557652 A0A1B0GU03 582 aa11.1□□□□□ -0.63
SUPT16H-208ENST00000557652 SH2D7A6NKC9 451 aaPredicted RBP11.1□□□□□ -0.63
SUPT16H-208ENST00000557652 IGKV1-5P01602 117 aa11.1□□□□□ -0.63
SUPT16H-208ENST00000557652 IGHG4P01861 327 aa11.1□□□□□ -0.63
SUPT16H-208ENST00000557652 ANXA7P20073 488 aaKnown RBP11.1□□□□□ -0.63
SUPT16H-208ENST00000557652 PPIFP30405 207 aaKnown RBP11.1□□□□□ -0.63
SUPT16H-208ENST00000557652 SSBP2P81877 361 aaPredicted RBP11.1□□□□□ -0.63
SUPT16H-208ENST00000557652 NDPQ00604 133 aa11.1□□□□□ -0.63
SUPT16H-208ENST00000557652 CFHR3Q02985 330 aa11.1□□□□□ -0.63
SUPT16H-208ENST00000557652 PJVKQ0ZLH3 352 aa11.1□□□□□ -0.63
SUPT16H-208ENST00000557652 FOXE3Q13461 319 aa11.1□□□□□ -0.63
SUPT16H-208ENST00000557652 SHISA2Q6UWI4 295 aa11.1□□□□□ -0.63
SUPT16H-208ENST00000557652 SLC35G3Q8N808 338 aa11.1□□□□□ -0.63
SUPT16H-208ENST00000557652 C3orf56Q8N813 242 aa11.1□□□□□ -0.63
SUPT16H-208ENST00000557652 LHFPL5Q8TAF8 219 aa11.1□□□□□ -0.63
SUPT16H-208ENST00000557652 PDCD10Q9BUL8 212 aa11.1□□□□□ -0.63
SUPT16H-208ENST00000557652 QTRT1Q9BXR0 403 aaKnown RBP11.1□□□□□ -0.63
SUPT16H-208ENST00000557652 SLA2Q9H6Q3 261 aa11.1□□□□□ -0.63
SUPT16H-208ENST00000557652 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.1□□□□□ -0.63
SUPT16H-208ENST00000557652 A0A1W2PN81 502 aa11.09□□□□□ -0.63
SUPT16H-208ENST00000557652 SNRPGP15A8MWD9 76 aa11.09□□□□□ -0.63
SUPT16H-208ENST00000557652 INMT-MINDY4F8WBC2 141 aa11.09□□□□□ -0.63
SUPT16H-208ENST00000557652 INS-IGF2F8WCM5 200 aa11.09□□□□□ -0.63
SUPT16H-208ENST00000557652 CYB5BO43169 146 aa11.09□□□□□ -0.63
SUPT16H-208ENST00000557652 IFNA21P01568 189 aa11.09□□□□□ -0.63
SUPT16H-208ENST00000557652 OPN1MWP04001 364 aa11.09□□□□□ -0.63
SUPT16H-208ENST00000557652 SULT1A3P0DMM9 295 aa11.09□□□□□ -0.63
SUPT16H-208ENST00000557652 SULT1A4P0DMN0 295 aa11.09□□□□□ -0.63
SUPT16H-208ENST00000557652 OPN1MW2P0DN77 364 aa11.09□□□□□ -0.63
SUPT16H-208ENST00000557652 OPN1MW3P0DN78 364 aa11.09□□□□□ -0.63
SUPT16H-208ENST00000557652 EGR2P11161 476 aaPredicted RBP11.09□□□□□ -0.63
SUPT16H-208ENST00000557652 CHRNA7P36544 502 aa11.09□□□□□ -0.63
SUPT16H-208ENST00000557652 OR2B8PP59922 312 aa11.09□□□□□ -0.63
SUPT16H-208ENST00000557652 HSPE1P61604 102 aaKnown RBP11.09□□□□□ -0.63
SUPT16H-208ENST00000557652 GNB1P62873 340 aa11.09□□□□□ -0.63
SUPT16H-208ENST00000557652 RGS21Q2M5E4 152 aa11.09□□□□□ -0.63
SUPT16H-208ENST00000557652 TMEM95Q3KNT9 176 aa11.09□□□□□ -0.63
SUPT16H-208ENST00000557652 PDLIM3Q53GG5 364 aaPredicted RBP11.09□□□□□ -0.63
SUPT16H-208ENST00000557652 NMSQ5H8A3 153 aa11.09□□□□□ -0.63
SUPT16H-208ENST00000557652 UNQ5815/PRO19632Q6UWF5 114 aa11.09□□□□□ -0.63
SUPT16H-208ENST00000557652 OR5AU1Q8NGC0 362 aa11.09□□□□□ -0.63
SUPT16H-208ENST00000557652 GRPEL2Q8TAA5 225 aa11.09□□□□□ -0.63
SUPT16H-208ENST00000557652 ZNF431Q8TF32 576 aaPredicted RBP11.09□□□□□ -0.63
SUPT16H-208ENST00000557652 ZFP57Q9NU63 452 aa11.09□□□□□ -0.63
SUPT16H-208ENST00000557652 OR51B2Q9Y5P1 312 aa11.09□□□□□ -0.63
SUPT16H-208ENST00000557652 MSGN1A6NI15 193 aa11.08□□□□□ -0.64
SUPT16H-208ENST00000557652 LINC01548A6NM66 108 aa11.08□□□□□ -0.64
SUPT16H-208ENST00000557652 NPIPB5A8MRT5 1133 aa11.08□□□□□ -0.64
SUPT16H-208ENST00000557652 FAM90A26D6RGX4 464 aa11.08□□□□□ -0.64
SUPT16H-208ENST00000557652 FBXO24O75426 580 aa11.08□□□□□ -0.64
SUPT16H-208ENST00000557652 RBMXL2O75526 392 aaKnown RBP11.08□□□□□ -0.64
SUPT16H-208ENST00000557652 LY86O95711 162 aa11.08□□□□□ -0.64
SUPT16H-208ENST00000557652 IGLV1-40P01703 118 aa11.08□□□□□ -0.64
SUPT16H-208ENST00000557652 OR9G9P0C7N8 305 aa11.08□□□□□ -0.64
SUPT16H-208ENST00000557652 TRAPPC2P0DI81 140 aa11.08□□□□□ -0.64
SUPT16H-208ENST00000557652 TRAPPC2BP0DI82 140 aa11.08□□□□□ -0.64
SUPT16H-208ENST00000557652 SMCO1Q147U7 214 aa11.08□□□□□ -0.64
SUPT16H-208ENST00000557652 ANKRD55Q3KP44 614 aa11.08□□□□□ -0.64
SUPT16H-208ENST00000557652 CXorf66Q5JRM2 361 aaPredicted RBP11.08□□□□□ -0.64
SUPT16H-208ENST00000557652 TTC9CQ8N5M4 171 aa11.08□□□□□ -0.64
SUPT16H-208ENST00000557652 LFNGQ8NES3 379 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms