RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 NUDT11Q96G61 164 aa5.64□□□□□ -1.51
SCFD1-222ENST00000556768 C5orf30Q96GV9 206 aa5.64□□□□□ -1.51
SCFD1-222ENST00000556768 HRASLSQ9HDD0 168 aa5.64□□□□□ -1.51
SCFD1-222ENST00000556768 PEMTQ9UBM1 199 aa5.64□□□□□ -1.51
SCFD1-222ENST00000556768 LSM4Q9Y4Z0 139 aaKnown RBP5.64□□□□□ -1.51
SCFD1-222ENST00000556768 IGKV1D-13A0A0B4J2D9 117 aa5.63□□□□□ -1.51
SCFD1-222ENST00000556768 TNFSF12O43508 249 aa5.63□□□□□ -1.51
SCFD1-222ENST00000556768 KBTBD11O94819 623 aa5.63□□□□□ -1.51
SCFD1-222ENST00000556768 FCER2P06734 321 aa5.63□□□□□ -1.51
SCFD1-222ENST00000556768 IGKV1-13P0DP09 117 aa5.63□□□□□ -1.51
SCFD1-222ENST00000556768 RPL30P62888 115 aaKnown RBP5.63□□□□□ -1.51
SCFD1-222ENST00000556768 RPL8P62917 257 aaKnown RBP5.63□□□□□ -1.51
SCFD1-222ENST00000556768 RHOGP84095 191 aa5.63□□□□□ -1.51
SCFD1-222ENST00000556768 KLF5Q13887 457 aaPredicted RBP5.63□□□□□ -1.51
SCFD1-222ENST00000556768 ZNF343Q6P1L6 599 aa5.63□□□□□ -1.51
SCFD1-222ENST00000556768 SSX9Q7RTT3 188 aa5.63□□□□□ -1.51
SCFD1-222ENST00000556768 TMEM17Q86X19 198 aa5.63□□□□□ -1.51
SCFD1-222ENST00000556768 VKORC1L1Q8N0U8 176 aa5.63□□□□□ -1.51
SCFD1-222ENST00000556768 TTC9CQ8N5M4 171 aa5.63□□□□□ -1.51
SCFD1-222ENST00000556768 ADAD2Q8NCV1 583 aaKnown RBP5.63□□□□□ -1.51
SCFD1-222ENST00000556768 DMBX1Q8NFW5 382 aa5.63□□□□□ -1.51
SCFD1-222ENST00000556768 OR9G4Q8NGQ1 327 aa5.63□□□□□ -1.51
SCFD1-222ENST00000556768 OR4A5Q8NH83 315 aa5.63□□□□□ -1.51
SCFD1-222ENST00000556768 SLC25A46Q96AG3 418 aa5.63□□□□□ -1.51
SCFD1-222ENST00000556768 WWC2-AS2Q96NR7 200 aa5.63□□□□□ -1.51
SCFD1-222ENST00000556768 FYTTD1Q96QD9 318 aaKnown RBP5.63□□□□□ -1.51
SCFD1-222ENST00000556768 COMMD5Q9GZQ3 224 aa5.63□□□□□ -1.51
SCFD1-222ENST00000556768 CCL28Q9NRJ3 127 aa5.63□□□□□ -1.51
SCFD1-222ENST00000556768 EHFQ9NZC4 300 aa5.63□□□□□ -1.51
SCFD1-222ENST00000556768 COMMD3Q9UBI1 195 aa5.63□□□□□ -1.51
SCFD1-222ENST00000556768 ZNF257Q9Y2Q1 563 aa5.63□□□□□ -1.51
SCFD1-222ENST00000556768 SULT1C2O00338 296 aa5.62□□□□□ -1.51
SCFD1-222ENST00000556768 RBFOX2O43251 390 aaKnown RBP eCLIP5.62□□□□□ -1.51
SCFD1-222ENST00000556768 HPRT1P00492 218 aa5.62□□□□□ -1.51
SCFD1-222ENST00000556768 IGLV2-14P01704 120 aa5.62□□□□□ -1.51
SCFD1-222ENST00000556768 GP9P14770 177 aa5.62□□□□□ -1.51
SCFD1-222ENST00000556768 NQO2P16083 231 aa5.62□□□□□ -1.51
SCFD1-222ENST00000556768 SPNP16150 400 aa5.62□□□□□ -1.51
SCFD1-222ENST00000556768 RPL27AP46776 148 aaKnown RBP5.62□□□□□ -1.51
SCFD1-222ENST00000556768 RORCP51449 518 aa5.62□□□□□ -1.51
SCFD1-222ENST00000556768 SYNJ2BPP57105 145 aa5.62□□□□□ -1.51
SCFD1-222ENST00000556768 TAS2R31P59538 309 aa5.62□□□□□ -1.51
SCFD1-222ENST00000556768 ERVK-16P61578 105 aa5.62□□□□□ -1.51
SCFD1-222ENST00000556768 TSPAN5P62079 268 aa5.62□□□□□ -1.51
SCFD1-222ENST00000556768 SSBP2P81877 361 aaPredicted RBP5.62□□□□□ -1.51
SCFD1-222ENST00000556768 BAK1Q16611 211 aa5.62□□□□□ -1.51
SCFD1-222ENST00000556768 AADACL3Q5VUY0 350 aa5.62□□□□□ -1.51
SCFD1-222ENST00000556768 LPCAT3Q6P1A2 487 aa5.62□□□□□ -1.51
SCFD1-222ENST00000556768 DHRS11Q6UWP2 260 aa5.62□□□□□ -1.51
SCFD1-222ENST00000556768 GTSCR1Q86UQ5 136 aa5.62□□□□□ -1.51
SCFD1-222ENST00000556768 OR5H2Q8NGV7 314 aa5.62□□□□□ -1.51
SCFD1-222ENST00000556768 TMEM167AQ8TBQ9 72 aa5.62□□□□□ -1.51
SCFD1-222ENST00000556768 AP3S1Q92572 193 aa5.62□□□□□ -1.51
SCFD1-222ENST00000556768 YIPF6Q96EC8 236 aa5.62□□□□□ -1.51
SCFD1-222ENST00000556768 RNF125Q96EQ8 232 aa5.62□□□□□ -1.51
SCFD1-222ENST00000556768 CMTM3Q96MX0 182 aa5.62□□□□□ -1.51
SCFD1-222ENST00000556768 SLC25A32Q9H2D1 315 aa5.62□□□□□ -1.51
SCFD1-222ENST00000556768 SLC2A9Q9NRM0 540 aa5.62□□□□□ -1.51
SCFD1-222ENST00000556768 THYN1Q9P016 225 aa5.62□□□□□ -1.51
SCFD1-222ENST00000556768 U3KQK5 164 aa5.62□□□□□ -1.51
SCFD1-222ENST00000556768 MEIS3P1A6NDR6 274 aa5.62□□□□□ -1.51
SCFD1-222ENST00000556768 APOA1P02647 267 aa5.62□□□□□ -1.51
SCFD1-222ENST00000556768 HIST1H1BP16401 226 aaKnown RBP5.62□□□□□ -1.51
SCFD1-222ENST00000556768 HLA-GP17693 338 aa5.62□□□□□ -1.51
SCFD1-222ENST00000556768 RFX2P48378 723 aa5.62□□□□□ -1.51
SCFD1-222ENST00000556768 TAS2R20P59543 309 aa5.62□□□□□ -1.51
SCFD1-222ENST00000556768 SRSF3P84103 164 aaKnown RBP5.62□□□□□ -1.51
SCFD1-222ENST00000556768 C15orf32Q32M92 178 aa5.62□□□□□ -1.51
SCFD1-222ENST00000556768 OR51H1Q8NH63 302 aa5.62□□□□□ -1.51
SCFD1-222ENST00000556768 GPHA2Q96T91 129 aa5.62□□□□□ -1.51
SCFD1-222ENST00000556768 ZNF2Q9BSG1 426 aaPredicted RBP5.62□□□□□ -1.51
SCFD1-222ENST00000556768 FUNDC2Q9BWH2 189 aa5.62□□□□□ -1.51
SCFD1-222ENST00000556768 PLEKHA2Q9HB19 425 aa5.62□□□□□ -1.51
SCFD1-222ENST00000556768 AKIP1Q9NQ31 210 aa5.62□□□□□ -1.51
SCFD1-222ENST00000556768 BET1LQ9NYM9 111 aa5.62□□□□□ -1.51
SCFD1-222ENST00000556768 NBEAL2Q6ZNJ1 2754 aa5.61□□□□□ -1.51
SCFD1-222ENST00000556768 TRBV9A0A0B4J1U6 114 aa5.61□□□□□ -1.51
SCFD1-222ENST00000556768 NPIPB5A8MRT5 1133 aa5.61□□□□□ -1.51
SCFD1-222ENST00000556768 B5MCH6 92 aa5.61□□□□□ -1.51
SCFD1-222ENST00000556768 OR2J3O76001 311 aa5.61□□□□□ -1.51
SCFD1-222ENST00000556768 IGLV1-51P01701 117 aa5.61□□□□□ -1.51
SCFD1-222ENST00000556768 PMP2P02689 132 aa5.61□□□□□ -1.51
SCFD1-222ENST00000556768 PRH1P02810 166 aa5.61□□□□□ -1.51
SCFD1-222ENST00000556768 IFNA6P05013 189 aa5.61□□□□□ -1.51
SCFD1-222ENST00000556768 PTHLHP12272 177 aa5.61□□□□□ -1.51
SCFD1-222ENST00000556768 RAP2BP61225 183 aa5.61□□□□□ -1.51
SCFD1-222ENST00000556768 VBP1P61758 197 aa5.61□□□□□ -1.51
SCFD1-222ENST00000556768 DYRK1AQ13627 763 aa5.61□□□□□ -1.51
SCFD1-222ENST00000556768 EXOSC2Q13868 293 aaKnown RBP5.61□□□□□ -1.51
SCFD1-222ENST00000556768 FAM106AQ4KMX7 169 aa5.61□□□□□ -1.51
SCFD1-222ENST00000556768 OR4A47Q6IF82 309 aa5.61□□□□□ -1.51
SCFD1-222ENST00000556768 LCN12Q6JVE5 192 aa5.61□□□□□ -1.51
SCFD1-222ENST00000556768 C11orf87Q6NUJ2 197 aa5.61□□□□□ -1.51
SCFD1-222ENST00000556768 ZNF818PQ6ZRF7 136 aa5.61□□□□□ -1.51
SCFD1-222ENST00000556768 SGPP2Q8IWX5 399 aa5.61□□□□□ -1.51
SCFD1-222ENST00000556768 PUSL1Q8N0Z8 303 aaKnown RBP5.61□□□□□ -1.51
SCFD1-222ENST00000556768 C15orf40Q8WUR7 153 aa5.61□□□□□ -1.51
SCFD1-222ENST00000556768 CXorf58Q96LI9 332 aa5.61□□□□□ -1.51
SCFD1-222ENST00000556768 TUBA4BQ9H853 241 aa5.61□□□□□ -1.51
SCFD1-222ENST00000556768 SCPEP1Q9HB40 452 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms