RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 CD81P60033 236 aa8.24□□□□□ -1.09
TMEM260-211ENST00000556648 HSPE1P61604 102 aaKnown RBP8.24□□□□□ -1.09
TMEM260-211ENST00000556648 RTL8BQ17RB0 113 aa8.24□□□□□ -1.09
TMEM260-211ENST00000556648 FBXL19-AS1Q494R0 122 aa8.24□□□□□ -1.09
TMEM260-211ENST00000556648 ARSJQ5FYB0 599 aaPredicted RBP8.24□□□□□ -1.09
TMEM260-211ENST00000556648 IQCF2Q8IXL9 164 aa8.24□□□□□ -1.09
TMEM260-211ENST00000556648 ZNF709Q8N972 641 aa8.24□□□□□ -1.09
TMEM260-211ENST00000556648 SLC24A4Q8NFF2 622 aa8.24□□□□□ -1.09
TMEM260-211ENST00000556648 RAB24Q969Q5 203 aa8.24□□□□□ -1.09
TMEM260-211ENST00000556648 VAX2Q9UIW0 290 aa8.24□□□□□ -1.09
TMEM260-211ENST00000556648 LY6HO94772 140 aa8.24□□□□□ -1.09
TMEM260-211ENST00000556648 OR2C1O95371 312 aa8.24□□□□□ -1.09
TMEM260-211ENST00000556648 PAX6P26367 422 aa8.24□□□□□ -1.09
TMEM260-211ENST00000556648 TAGLN2P37802 199 aaKnown RBP8.24□□□□□ -1.09
TMEM260-211ENST00000556648 RPP30P78346 268 aaKnown RBP8.24□□□□□ -1.09
TMEM260-211ENST00000556648 TMEM155Q4W5P6 130 aa8.24□□□□□ -1.09
TMEM260-211ENST00000556648 MIC13Q5XKP0 118 aa8.24□□□□□ -1.09
TMEM260-211ENST00000556648 ZNF343Q6P1L6 599 aa8.24□□□□□ -1.09
TMEM260-211ENST00000556648 OR10A7Q8NGE5 316 aa8.24□□□□□ -1.09
TMEM260-211ENST00000556648 GGTLC1Q9BX51 225 aa8.24□□□□□ -1.09
TMEM260-211ENST00000556648 ACTR3CQ9C0K3 210 aaPredicted RBP8.24□□□□□ -1.09
TMEM260-211ENST00000556648 PATZ1Q9HBE1 687 aaKnown RBP8.24□□□□□ -1.09
TMEM260-211ENST00000556648 C17orf112F2Z3M2 114 aa8.23□□□□□ -1.09
TMEM260-211ENST00000556648 J3QR06 171 aa8.23□□□□□ -1.09
TMEM260-211ENST00000556648 FOLR2P14207 255 aa8.23□□□□□ -1.09
TMEM260-211ENST00000556648 CDC34P49427 236 aaPredicted RBP8.23□□□□□ -1.09
TMEM260-211ENST00000556648 ZNF672Q499Z4 452 aaPredicted RBP8.23□□□□□ -1.09
TMEM260-211ENST00000556648 MOB3BQ86TA1 216 aa8.23□□□□□ -1.09
TMEM260-211ENST00000556648 MUC15Q8N387 334 aa8.23□□□□□ -1.09
TMEM260-211ENST00000556648 C11orf42Q8N5U0 333 aa8.23□□□□□ -1.09
TMEM260-211ENST00000556648 SSMEM1Q8WWF3 244 aa8.23□□□□□ -1.09
TMEM260-211ENST00000556648 TVP23CQ96ET8 276 aa8.23□□□□□ -1.09
TMEM260-211ENST00000556648 HARBI1Q96MB7 349 aa8.23□□□□□ -1.09
TMEM260-211ENST00000556648 NIPSNAP3BQ9BS92 247 aa8.23□□□□□ -1.09
TMEM260-211ENST00000556648 TUBA4BQ9H853 241 aa8.23□□□□□ -1.09
TMEM260-211ENST00000556648 UNKLQ9H9P5 680 aaKnown RBP8.23□□□□□ -1.09
TMEM260-211ENST00000556648 ENY2Q9NPA8 101 aa8.23□□□□□ -1.09
TMEM260-211ENST00000556648 KAAG1Q9UBP8 84 aa8.23□□□□□ -1.09
TMEM260-211ENST00000556648 POLEQ07864 2286 aa8.23□□□□□ -1.09
TMEM260-211ENST00000556648 TEX50A0A1B0GTY4 177 aa8.22□□□□□ -1.09
TMEM260-211ENST00000556648 IFNA1P01562 189 aa8.22□□□□□ -1.09
TMEM260-211ENST00000556648 MBP02144 154 aa8.22□□□□□ -1.09
TMEM260-211ENST00000556648 RAB13P51153 203 aa8.22□□□□□ -1.09
TMEM260-211ENST00000556648 LY6DQ14210 128 aa8.22□□□□□ -1.09
TMEM260-211ENST00000556648 ACOT6Q3I5F7 207 aaPredicted RBP8.22□□□□□ -1.09
TMEM260-211ENST00000556648 OR10W1Q8NGF6 305 aa8.22□□□□□ -1.09
TMEM260-211ENST00000556648 OR10X1Q8NGY0 326 aa8.22□□□□□ -1.09
TMEM260-211ENST00000556648 NABP2Q9BQ15 211 aa8.22□□□□□ -1.09
TMEM260-211ENST00000556648 PLEKHA3Q9HB20 300 aa8.22□□□□□ -1.09
TMEM260-211ENST00000556648 RALYQ9UKM9 306 aaKnown RBP8.22□□□□□ -1.09
TMEM260-211ENST00000556648 PRNDQ9UKY0 176 aa8.22□□□□□ -1.09
TMEM260-211ENST00000556648 E7EUB6 86 aa8.22□□□□□ -1.09
TMEM260-211ENST00000556648 PAGE4O60829 102 aa8.22□□□□□ -1.09
TMEM260-211ENST00000556648 KBTBD11O94819 623 aa8.22□□□□□ -1.09
TMEM260-211ENST00000556648 APOA2P02652 100 aa8.22□□□□□ -1.09
TMEM260-211ENST00000556648 MT-ND4LP03901 98 aa8.22□□□□□ -1.09
TMEM260-211ENST00000556648 IGHV1-8P0DP01 117 aa8.22□□□□□ -1.09
TMEM260-211ENST00000556648 RAB5AP20339 215 aa8.22□□□□□ -1.09
TMEM260-211ENST00000556648 PRCDQ00LT1 54 aa8.22□□□□□ -1.09
TMEM260-211ENST00000556648 ZNF674Q2M3X9 581 aa8.22□□□□□ -1.09
TMEM260-211ENST00000556648 SLC35E3Q7Z769 313 aa8.22□□□□□ -1.09
TMEM260-211ENST00000556648 OR5AN1Q8NGI8 311 aa8.22□□□□□ -1.09
TMEM260-211ENST00000556648 ST6GALNAC6Q969X2 333 aa8.22□□□□□ -1.09
TMEM260-211ENST00000556648 RITA1Q96K30 269 aa8.22□□□□□ -1.09
TMEM260-211ENST00000556648 SSX3Q99909 188 aa8.22□□□□□ -1.09
TMEM260-211ENST00000556648 PXMP4Q9Y6I8 212 aa8.22□□□□□ -1.09
TMEM260-211ENST00000556648 SEC14L6B5MCN3 397 aa8.21□□□□□ -1.1
TMEM260-211ENST00000556648 LY86O95711 162 aa8.21□□□□□ -1.1
TMEM260-211ENST00000556648 CXCL1P09341 107 aa8.21□□□□□ -1.1
TMEM260-211ENST00000556648 IGFBP2P18065 325 aa8.21□□□□□ -1.1
TMEM260-211ENST00000556648 OPRK1P41145 380 aa8.21□□□□□ -1.1
TMEM260-211ENST00000556648 MEF2BQ02080 365 aaPredicted RBP8.21□□□□□ -1.1
TMEM260-211ENST00000556648 C10orf55Q5SWW7 151 aa8.21□□□□□ -1.1
TMEM260-211ENST00000556648 SPATA31B1PQ5VZV4 182 aa8.21□□□□□ -1.1
TMEM260-211ENST00000556648 WDR25Q64LD2 544 aaPredicted RBP8.21□□□□□ -1.1
TMEM260-211ENST00000556648 ZNF841Q6ZN19 808 aa8.21□□□□□ -1.1
TMEM260-211ENST00000556648 ZNF596Q8TC21 504 aa8.21□□□□□ -1.1
TMEM260-211ENST00000556648 GGACTQ9BVM4 153 aa8.21□□□□□ -1.1
TMEM260-211ENST00000556648 TPSG1Q9NRR2 321 aa8.21□□□□□ -1.1
TMEM260-211ENST00000556648 BET1LQ9NYM9 111 aa8.21□□□□□ -1.1
TMEM260-211ENST00000556648 LSM4Q9Y4Z0 139 aaKnown RBP8.21□□□□□ -1.1
TMEM260-211ENST00000556648 URGCP-MRPS24S4R325 110 aa8.21□□□□□ -1.1
TMEM260-211ENST00000556648 IGHV3-72A0A0B4J1Y9 119 aa8.2□□□□□ -1.1
TMEM260-211ENST00000556648 CGB1A6NKQ9 187 aa8.2□□□□□ -1.1
TMEM260-211ENST00000556648 IGLV2-23P01705 113 aa8.2□□□□□ -1.1
TMEM260-211ENST00000556648 IGHV2-70P01814 119 aa8.2□□□□□ -1.1
TMEM260-211ENST00000556648 PSMB3P49720 205 aa8.2□□□□□ -1.1
TMEM260-211ENST00000556648 UBE2G2P60604 165 aa8.2□□□□□ -1.1
TMEM260-211ENST00000556648 MLANAQ16655 118 aa8.2□□□□□ -1.1
TMEM260-211ENST00000556648 TMEM177Q53S58 311 aa8.2□□□□□ -1.1
TMEM260-211ENST00000556648 LINC00311Q8N616 119 aa8.2□□□□□ -1.1
TMEM260-211ENST00000556648 OR4F5Q8NH21 305 aa8.2□□□□□ -1.1
TMEM260-211ENST00000556648 Q8WTZ3 238 aa8.2□□□□□ -1.1
TMEM260-211ENST00000556648 RPUSD4Q96CM3 377 aaKnown RBP8.2□□□□□ -1.1
TMEM260-211ENST00000556648 OR4F4Q96R69 305 aa8.2□□□□□ -1.1
TMEM260-211ENST00000556648 P2RX4Q99571 388 aa8.2□□□□□ -1.1
TMEM260-211ENST00000556648 ZNF257Q9Y2Q1 563 aa8.2□□□□□ -1.1
TMEM260-211ENST00000556648 TGIF2-C20orf24A0A0A6YYL0 155 aa8.2□□□□□ -1.1
TMEM260-211ENST00000556648 C1orf196B1AJZ1 125 aa8.2□□□□□ -1.1
TMEM260-211ENST00000556648 CYB5BO43169 146 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms