RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 PRB1P04280 392 aa14.89□□□□□ -0.03
SDR39U1-220ENST00000556548 PPT1P50897 306 aa14.89□□□□□ -0.03
SDR39U1-220ENST00000556548 CCL20P78556 96 aa14.89□□□□□ -0.03
SDR39U1-220ENST00000556548 AARDQ4LEZ3 155 aa14.89□□□□□ -0.03
SDR39U1-220ENST00000556548 NEU4Q8WWR8 484 aaPredicted RBP14.89□□□□□ -0.03
SDR39U1-220ENST00000556548 RRHO14718 337 aa14.89□□□□□ -0.03
SDR39U1-220ENST00000556548 APOA2P02652 100 aa14.89□□□□□ -0.03
SDR39U1-220ENST00000556548 AGAP20933 346 aa14.89□□□□□ -0.03
SDR39U1-220ENST00000556548 COX7A1P24310 79 aa14.89□□□□□ -0.03
SDR39U1-220ENST00000556548 RELQ04864 619 aaPredicted RBP14.89□□□□□ -0.03
SDR39U1-220ENST00000556548 NEIL1Q96FI4 390 aaPredicted RBP14.89□□□□□ -0.03
SDR39U1-220ENST00000556548 CLCC1Q96S66 551 aa14.89□□□□□ -0.03
SDR39U1-220ENST00000556548 HIPK2Q9H2X6 1198 aa14.89□□□□□ -0.03
SDR39U1-220ENST00000556548 SMCO4Q9NRQ5 59 aa14.89□□□□□ -0.03
SDR39U1-220ENST00000556548 ONECUT1Q9UBC0 465 aa14.89□□□□□ -0.03
SDR39U1-220ENST00000556548 TET2Q6N021 2002 aaPredicted RBP14.89□□□□□ -0.03
SDR39U1-220ENST00000556548 IGHV3-72A0A0B4J1Y9 119 aa14.88□□□□□ -0.03
SDR39U1-220ENST00000556548 VDAC2P45880 294 aaPredicted RBP14.88□□□□□ -0.03
SDR39U1-220ENST00000556548 ELLP55199 621 aaPredicted RBP14.88□□□□□ -0.03
SDR39U1-220ENST00000556548 TAF15Q92804 592 aaKnown RBP eCLIP14.88□□□□□ -0.03
SDR39U1-220ENST00000556548 HARBI1Q96MB7 349 aa14.88□□□□□ -0.03
SDR39U1-220ENST00000556548 EIF5A2Q9GZV4 153 aaKnown RBP14.88□□□□□ -0.03
SDR39U1-220ENST00000556548 TMPRSS5Q9H3S3 457 aa14.88□□□□□ -0.03
SDR39U1-220ENST00000556548 AKAP6Q13023 2319 aa14.88□□□□□ -0.03
SDR39U1-220ENST00000556548 A0A1B0GV90 55 aa14.88□□□□□ -0.03
SDR39U1-220ENST00000556548 C22orf46C9J442 243 aa14.88□□□□□ -0.03
SDR39U1-220ENST00000556548 SAA1P0DJI8 122 aaPredicted RBP14.88□□□□□ -0.03
SDR39U1-220ENST00000556548 ZNF429Q86V71 674 aa14.88□□□□□ -0.03
SDR39U1-220ENST00000556548 ST6GALNAC6Q969X2 333 aa14.88□□□□□ -0.03
SDR39U1-220ENST00000556548 NABP2Q9BQ15 211 aa14.88□□□□□ -0.03
SDR39U1-220ENST00000556548 TMEM14BQ9NUH8 114 aa14.88□□□□□ -0.03
SDR39U1-220ENST00000556548 OR51B2Q9Y5P1 312 aa14.88□□□□□ -0.03
SDR39U1-220ENST00000556548 IGHV2-26A0A0B4J1V2 119 aa14.87□□□□□ -0.03
SDR39U1-220ENST00000556548 RD3LP0DJH9 198 aa14.87□□□□□ -0.03
SDR39U1-220ENST00000556548 LINC00311Q8N616 119 aa14.87□□□□□ -0.03
SDR39U1-220ENST00000556548 OR5AN1Q8NGI8 311 aa14.87□□□□□ -0.03
SDR39U1-220ENST00000556548 OR52E5Q8NH55 327 aa14.87□□□□□ -0.03
SDR39U1-220ENST00000556548 TMEM186Q96B77 213 aa14.87□□□□□ -0.03
SDR39U1-220ENST00000556548 A0A087X0M5 115 aa14.87□□□□□ -0.03
SDR39U1-220ENST00000556548 A0A1B0GX30 115 aa14.87□□□□□ -0.03
SDR39U1-220ENST00000556548 OR8U8P0C7N1 319 aa14.87□□□□□ -0.03
SDR39U1-220ENST00000556548 RAB2AP61019 212 aa14.87□□□□□ -0.03
SDR39U1-220ENST00000556548 GNB2P62879 340 aa14.87□□□□□ -0.03
SDR39U1-220ENST00000556548 GUK1Q16774 197 aa14.87□□□□□ -0.03
SDR39U1-220ENST00000556548 TGIF2LXQ8IUE1 241 aa14.87□□□□□ -0.03
SDR39U1-220ENST00000556548 PINX1Q96BK5 328 aaKnown RBP14.87□□□□□ -0.03
SDR39U1-220ENST00000556548 FLYWCH2Q96CP2 140 aaKnown RBP14.87□□□□□ -0.03
SDR39U1-220ENST00000556548 TMEM147Q9BVK8 224 aa14.87□□□□□ -0.03
SDR39U1-220ENST00000556548 CHODLQ9H9P2 273 aa14.87□□□□□ -0.03
SDR39U1-220ENST00000556548 RPRMQ9NS64 109 aa14.87□□□□□ -0.03
SDR39U1-220ENST00000556548 PPP1R14DQ9NXH3 145 aa14.87□□□□□ -0.03
SDR39U1-220ENST00000556548 FOXA2Q9Y261 457 aaPredicted RBP14.87□□□□□ -0.03
SDR39U1-220ENST00000556548 VPS13CQ709C8 3753 aa14.86□□□□□ -0.03
SDR39U1-220ENST00000556548 ARHGAP32A7KAX9 2087 aa14.86□□□□□ -0.03
SDR39U1-220ENST00000556548 FSTL3O95633 263 aa14.86□□□□□ -0.03
SDR39U1-220ENST00000556548 IGHV2-5P01817 119 aa14.86□□□□□ -0.03
SDR39U1-220ENST00000556548 ARG1P05089 322 aa14.86□□□□□ -0.03
SDR39U1-220ENST00000556548 CD5P06127 495 aa14.86□□□□□ -0.03
SDR39U1-220ENST00000556548 SFTA3P0C7M3 94 aa14.86□□□□□ -0.03
SDR39U1-220ENST00000556548 FGF7P21781 194 aa14.86□□□□□ -0.03
SDR39U1-220ENST00000556548 DVL1P1P54792 670 aaPredicted RBP14.86□□□□□ -0.03
SDR39U1-220ENST00000556548 HSPE1P61604 102 aaKnown RBP14.86□□□□□ -0.03
SDR39U1-220ENST00000556548 ZNF596Q8TC21 504 aa14.86□□□□□ -0.03
SDR39U1-220ENST00000556548 LHX4Q969G2 390 aa14.86□□□□□ -0.03
SDR39U1-220ENST00000556548 GGACTQ9BVM4 153 aa14.86□□□□□ -0.03
SDR39U1-220ENST00000556548 UPK2O00526 184 aa14.86□□□□□ -0.03
SDR39U1-220ENST00000556548 ENSAO43768 121 aaKnown RBP14.86□□□□□ -0.03
SDR39U1-220ENST00000556548 ARF6P62330 175 aa14.86□□□□□ -0.03
SDR39U1-220ENST00000556548 POU2AF1Q16633 256 aa14.86□□□□□ -0.03
SDR39U1-220ENST00000556548 SPSB3Q6PJ21 355 aa14.86□□□□□ -0.03
SDR39U1-220ENST00000556548 C8orf31Q8N9H6 132 aa14.86□□□□□ -0.03
SDR39U1-220ENST00000556548 TMEM170AQ8WVE7 144 aa14.86□□□□□ -0.03
SDR39U1-220ENST00000556548 RITA1Q96K30 269 aa14.86□□□□□ -0.03
SDR39U1-220ENST00000556548 UTP20O75691 2785 aaKnown RBP14.85□□□□□ -0.03
SDR39U1-220ENST00000556548 SMCO3A2RU48 225 aa14.85□□□□□ -0.03
SDR39U1-220ENST00000556548 A6NNC1 897 aa14.85□□□□□ -0.03
SDR39U1-220ENST00000556548 LY86O95711 162 aa14.85□□□□□ -0.03
SDR39U1-220ENST00000556548 ETV3LQ6ZN32 361 aa14.85□□□□□ -0.03
SDR39U1-220ENST00000556548 RARRES2Q99969 163 aa14.85□□□□□ -0.03
SDR39U1-220ENST00000556548 ATP6V1FQ16864 119 aa14.84□□□□□ -0.03
SDR39U1-220ENST00000556548 PDLIM3Q53GG5 364 aaPredicted RBP14.84□□□□□ -0.03
SDR39U1-220ENST00000556548 ENY2Q9NPA8 101 aa14.84□□□□□ -0.03
SDR39U1-220ENST00000556548 SIRT7Q9NRC8 400 aa14.84□□□□□ -0.03
SDR39U1-220ENST00000556548 A0A1W2PPH5 198 aa14.84□□□□□ -0.03
SDR39U1-220ENST00000556548 SSX7Q7RTT5 188 aa14.84□□□□□ -0.03
SDR39U1-220ENST00000556548 PNKDQ8N490 385 aa14.84□□□□□ -0.03
SDR39U1-220ENST00000556548 OSR1Q8TAX0 266 aaPredicted RBP14.84□□□□□ -0.03
SDR39U1-220ENST00000556548 HIST1H2BAQ96A08 127 aa14.84□□□□□ -0.03
SDR39U1-220ENST00000556548 SCRT1Q9BWW7 348 aa14.84□□□□□ -0.03
SDR39U1-220ENST00000556548 PRNDQ9UKY0 176 aa14.84□□□□□ -0.03
SDR39U1-220ENST00000556548 KBTBD11O94819 623 aa14.83□□□□□ -0.03
SDR39U1-220ENST00000556548 IL6RP08887 468 aaPredicted RBP14.83□□□□□ -0.03
SDR39U1-220ENST00000556548 GPR6P46095 362 aaPredicted RBP14.83□□□□□ -0.03
SDR39U1-220ENST00000556548 TAS2R60P59551 318 aa14.83□□□□□ -0.03
SDR39U1-220ENST00000556548 RPP30P78346 268 aaKnown RBP14.83□□□□□ -0.03
SDR39U1-220ENST00000556548 TLE4Q04727 773 aa14.83□□□□□ -0.03
SDR39U1-220ENST00000556548 LCN15Q6UWW0 184 aa14.83□□□□□ -0.03
SDR39U1-220ENST00000556548 TMEM68Q96MH6 324 aa14.83□□□□□ -0.03
SDR39U1-220ENST00000556548 PSMG3Q9BT73 122 aaPredicted RBP14.83□□□□□ -0.03
SDR39U1-220ENST00000556548 CLEC7AQ9BXN2 247 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms