RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 UXS1Q8NBZ7 420 aa13.73□□□□□ -0.21
TUBB3-211ENST00000556536 FAM103A1Q9BTL3 118 aaKnown RBP13.73□□□□□ -0.21
TUBB3-211ENST00000556536 GPN1Q9HCN4 374 aaPredicted RBP13.73□□□□□ -0.21
TUBB3-211ENST00000556536 PARP11Q9NR21 331 aa13.73□□□□□ -0.21
TUBB3-211ENST00000556536 LINC00527Q9UJ94 153 aa13.73□□□□□ -0.21
TUBB3-211ENST00000556536 ALG5Q9Y673 324 aa13.73□□□□□ -0.21
TUBB3-211ENST00000556536 DUXBA0A1W2PPF3 345 aa13.72□□□□□ -0.21
TUBB3-211ENST00000556536 C15orf61A6NNL5 157 aa13.72□□□□□ -0.21
TUBB3-211ENST00000556536 SNRPGP15A8MWD9 76 aa13.72□□□□□ -0.21
TUBB3-211ENST00000556536 E7EUB6 86 aa13.72□□□□□ -0.21
TUBB3-211ENST00000556536 ATP6V0E1O15342 81 aa13.72□□□□□ -0.21
TUBB3-211ENST00000556536 CREBL2O60519 120 aaPredicted RBP13.72□□□□□ -0.21
TUBB3-211ENST00000556536 SNAPC5O75971 98 aa13.72□□□□□ -0.21
TUBB3-211ENST00000556536 OPN1MWP04001 364 aa13.72□□□□□ -0.21
TUBB3-211ENST00000556536 OPN1MW2P0DN77 364 aa13.72□□□□□ -0.21
TUBB3-211ENST00000556536 OPN1MW3P0DN78 364 aa13.72□□□□□ -0.21
TUBB3-211ENST00000556536 COMPP49747 757 aaPredicted RBP13.72□□□□□ -0.21
TUBB3-211ENST00000556536 ARSJQ5FYB0 599 aaPredicted RBP13.72□□□□□ -0.21
TUBB3-211ENST00000556536 GGNBP1Q5YKI7 109 aa13.72□□□□□ -0.21
TUBB3-211ENST00000556536 MINDY2Q8NBR6 621 aa13.72□□□□□ -0.21
TUBB3-211ENST00000556536 OR4A16Q8NH70 328 aa13.72□□□□□ -0.21
TUBB3-211ENST00000556536 LINC01006Q8NI28 216 aa13.72□□□□□ -0.21
TUBB3-211ENST00000556536 GRPEL2Q8TAA5 225 aa13.72□□□□□ -0.21
TUBB3-211ENST00000556536 ARPC1AQ92747 370 aa13.72□□□□□ -0.21
TUBB3-211ENST00000556536 NOL4LQ96MY1 436 aaPredicted RBP13.72□□□□□ -0.21
TUBB3-211ENST00000556536 QTRT1Q9BXR0 403 aaKnown RBP13.72□□□□□ -0.21
TUBB3-211ENST00000556536 SERTAD4Q9NUC0 356 aa13.72□□□□□ -0.21
TUBB3-211ENST00000556536 CACNG5Q9UF02 275 aa13.72□□□□□ -0.21
TUBB3-211ENST00000556536 TEX50A0A1B0GTY4 177 aa13.71□□□□□ -0.21
TUBB3-211ENST00000556536 A0A1B0GW64 132 aa13.71□□□□□ -0.21
TUBB3-211ENST00000556536 C7orf66A4D0T2 115 aa13.71□□□□□ -0.21
TUBB3-211ENST00000556536 CGB1A6NKQ9 187 aa13.71□□□□□ -0.21
TUBB3-211ENST00000556536 MPTX1A8MV57 137 aa13.71□□□□□ -0.21
TUBB3-211ENST00000556536 KCNAB3O43448 404 aa13.71□□□□□ -0.21
TUBB3-211ENST00000556536 ACTL6BO94805 426 aa13.71□□□□□ -0.21
TUBB3-211ENST00000556536 MAS1LP35410 378 aa13.71□□□□□ -0.21
TUBB3-211ENST00000556536 VDAC2P45880 294 aaPredicted RBP13.71□□□□□ -0.21
TUBB3-211ENST00000556536 C2orf68Q2NKX9 166 aa13.71□□□□□ -0.21
TUBB3-211ENST00000556536 OR2T6Q8NHC8 308 aa13.71□□□□□ -0.21
TUBB3-211ENST00000556536 ABHD5Q8WTS1 349 aa13.71□□□□□ -0.21
TUBB3-211ENST00000556536 SRSF12Q8WXF0 261 aaKnown RBP13.71□□□□□ -0.21
TUBB3-211ENST00000556536 TMEM14BQ9NUH8 114 aa13.71□□□□□ -0.21
TUBB3-211ENST00000556536 PRNDQ9UKY0 176 aa13.71□□□□□ -0.21
TUBB3-211ENST00000556536 FOXA2Q9Y261 457 aaPredicted RBP13.71□□□□□ -0.21
TUBB3-211ENST00000556536 TMED3Q9Y3Q3 217 aa13.71□□□□□ -0.21
TUBB3-211ENST00000556536 OR51B2Q9Y5P1 312 aa13.71□□□□□ -0.21
TUBB3-211ENST00000556536 PIGBOS1A0A0B4J2F0 54 aa13.7□□□□□ -0.22
TUBB3-211ENST00000556536 MSGN1A6NI15 193 aa13.7□□□□□ -0.22
TUBB3-211ENST00000556536 CCSO14618 274 aa13.7□□□□□ -0.22
TUBB3-211ENST00000556536 WIPF1O43516 503 aa13.7□□□□□ -0.22
TUBB3-211ENST00000556536 FGF2P09038 288 aa13.7□□□□□ -0.22
TUBB3-211ENST00000556536 MDKP21741 143 aaPredicted RBP13.7□□□□□ -0.22
TUBB3-211ENST00000556536 RPL27AP46776 148 aaKnown RBP13.7□□□□□ -0.22
TUBB3-211ENST00000556536 FOXRED2Q8IWF2 684 aa13.7□□□□□ -0.22
TUBB3-211ENST00000556536 OR4F5Q8NH21 305 aa13.7□□□□□ -0.22
TUBB3-211ENST00000556536 WSB1Q9Y6I7 421 aa13.7□□□□□ -0.22
TUBB3-211ENST00000556536 TEX22C9J3V5 150 aa13.69□□□□□ -0.22
TUBB3-211ENST00000556536 G3V318 75 aa13.69□□□□□ -0.22
TUBB3-211ENST00000556536 AP4M1O00189 453 aa13.69□□□□□ -0.22
TUBB3-211ENST00000556536 ST8SIA3O43173 380 aa13.69□□□□□ -0.22
TUBB3-211ENST00000556536 RBMXL2O75526 392 aaKnown RBP13.69□□□□□ -0.22
TUBB3-211ENST00000556536 IGF1P05019 195 aa13.69□□□□□ -0.22
TUBB3-211ENST00000556536 APELAP0DMC3 54 aa13.69□□□□□ -0.22
TUBB3-211ENST00000556536 SULT1A3P0DMM9 295 aa13.69□□□□□ -0.22
TUBB3-211ENST00000556536 SULT1A4P0DMN0 295 aa13.69□□□□□ -0.22
TUBB3-211ENST00000556536 SMCO1Q147U7 214 aa13.69□□□□□ -0.22
TUBB3-211ENST00000556536 SGMS2Q8NHU3 365 aa13.69□□□□□ -0.22
TUBB3-211ENST00000556536 FYTTD1Q96QD9 318 aaKnown RBP13.69□□□□□ -0.22
TUBB3-211ENST00000556536 COMMD5Q9GZQ3 224 aa13.69□□□□□ -0.22
TUBB3-211ENST00000556536 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.69□□□□□ -0.22
TUBB3-211ENST00000556536 A0A1B0GU03 582 aa13.68□□□□□ -0.22
TUBB3-211ENST00000556536 HMX3A6NHT5 357 aa13.68□□□□□ -0.22
TUBB3-211ENST00000556536 NXPH3O95157 252 aa13.68□□□□□ -0.22
TUBB3-211ENST00000556536 IFNA21P01568 189 aa13.68□□□□□ -0.22
TUBB3-211ENST00000556536 CRIP2P52943 208 aaPredicted RBP13.68□□□□□ -0.22
TUBB3-211ENST00000556536 ECSCRQ19T08 205 aa13.68□□□□□ -0.22
TUBB3-211ENST00000556536 AARDQ4LEZ3 155 aa13.68□□□□□ -0.22
TUBB3-211ENST00000556536 ASPHD1Q5U4P2 390 aa13.68□□□□□ -0.22
TUBB3-211ENST00000556536 ZNF429Q86V71 674 aa13.68□□□□□ -0.22
TUBB3-211ENST00000556536 STPG2Q8N412 459 aa13.68□□□□□ -0.22
TUBB3-211ENST00000556536 LFNGQ8NES3 379 aa13.68□□□□□ -0.22
TUBB3-211ENST00000556536 OR10C1Q96KK4 312 aa13.68□□□□□ -0.22
TUBB3-211ENST00000556536 WNT10AQ9GZT5 417 aa13.68□□□□□ -0.22
TUBB3-211ENST00000556536 FKBP11Q9NYL4 201 aa13.68□□□□□ -0.22
TUBB3-211ENST00000556536 TRAV41A0A0B4J266 112 aa13.67□□□□□ -0.22
TUBB3-211ENST00000556536 TMEM89A2RUT3 159 aa13.67□□□□□ -0.22
TUBB3-211ENST00000556536 CLPSL1A2RUU4 121 aa13.67□□□□□ -0.22
TUBB3-211ENST00000556536 SSNA1O43805 119 aa13.67□□□□□ -0.22
TUBB3-211ENST00000556536 PITX3O75364 302 aa13.67□□□□□ -0.22
TUBB3-211ENST00000556536 HSPE1P61604 102 aaKnown RBP13.67□□□□□ -0.22
TUBB3-211ENST00000556536 C19orf54Q5BKX5 351 aa13.67□□□□□ -0.22
TUBB3-211ENST00000556536 SPINK9Q5DT21 86 aa13.67□□□□□ -0.22
TUBB3-211ENST00000556536 OR10W1Q8NGF6 305 aa13.67□□□□□ -0.22
TUBB3-211ENST00000556536 OR1L8Q8NGR8 309 aa13.67□□□□□ -0.22
TUBB3-211ENST00000556536 OR5B3Q8NH48 314 aa13.67□□□□□ -0.22
TUBB3-211ENST00000556536 HINT2Q9BX68 163 aa13.67□□□□□ -0.22
TUBB3-211ENST00000556536 NDUFA4L2Q9NRX3 87 aa13.67□□□□□ -0.22
TUBB3-211ENST00000556536 COA4Q9NYJ1 87 aa13.67□□□□□ -0.22
TUBB3-211ENST00000556536 ZNF257Q9Y2Q1 563 aa13.67□□□□□ -0.22
TUBB3-211ENST00000556536 C13orf42A0A1B0GVH6 325 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms