RNA–Protein interactions for RNA: ENST00000556079.1

TMEM260-209, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 596 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-209ENST00000556079 PRSS3P35030 304 aa4.86□□□□□ -1.63
TMEM260-209ENST00000556079 LPAR6P43657 344 aa4.86□□□□□ -1.63
TMEM260-209ENST00000556079 RPL27AP46776 148 aaKnown RBP4.86□□□□□ -1.63
TMEM260-209ENST00000556079 MFAP2P55001 183 aa4.86□□□□□ -1.63
TMEM260-209ENST00000556079 SCAND1P57086 179 aa4.86□□□□□ -1.63
TMEM260-209ENST00000556079 OR2B8PP59922 312 aa4.86□□□□□ -1.63
TMEM260-209ENST00000556079 HERV-K104P61576 105 aa4.86□□□□□ -1.63
TMEM260-209ENST00000556079 TMEM267Q0VDI3 215 aaPredicted RBP4.86□□□□□ -1.63
TMEM260-209ENST00000556079 CBX3Q13185 183 aa4.86□□□□□ -1.63
TMEM260-209ENST00000556079 ARL6IP1Q15041 203 aa4.86□□□□□ -1.63
TMEM260-209ENST00000556079 ZNF585BQ52M93 769 aa4.86□□□□□ -1.63
TMEM260-209ENST00000556079 SPINK9Q5DT21 86 aa4.86□□□□□ -1.63
TMEM260-209ENST00000556079 ACSM6Q6P461 480 aa4.86□□□□□ -1.63
TMEM260-209ENST00000556079 ANKRD13BQ86YJ7 626 aa4.86□□□□□ -1.63
TMEM260-209ENST00000556079 CLVS1Q8IUQ0 354 aaPredicted RBP4.86□□□□□ -1.63
TMEM260-209ENST00000556079 LAX1Q8IWV1 398 aa4.86□□□□□ -1.63
TMEM260-209ENST00000556079 OR5H2Q8NGV7 314 aa4.86□□□□□ -1.63
TMEM260-209ENST00000556079 OR52I2Q8NH67 350 aa4.86□□□□□ -1.63
TMEM260-209ENST00000556079 OR4S2Q8NH73 311 aa4.86□□□□□ -1.63
TMEM260-209ENST00000556079 OSR1Q8TAX0 266 aaPredicted RBP4.86□□□□□ -1.63
TMEM260-209ENST00000556079 TMEM167AQ8TBQ9 72 aa4.86□□□□□ -1.63
TMEM260-209ENST00000556079 GPX8Q8TED1 209 aa4.86□□□□□ -1.63
TMEM260-209ENST00000556079 CCDC140Q96MF4 163 aa4.86□□□□□ -1.63
TMEM260-209ENST00000556079 FANCD2OSQ96PS1 177 aa4.86□□□□□ -1.63
TMEM260-209ENST00000556079 HSD17B10Q99714 261 aaKnown RBP4.86□□□□□ -1.63
TMEM260-209ENST00000556079 MCRIP2Q9BUT9 160 aaKnown RBP4.86□□□□□ -1.63
TMEM260-209ENST00000556079 WFDC10AQ9H1F0 79 aa4.86□□□□□ -1.63
TMEM260-209ENST00000556079 GHITMQ9H3K2 345 aa4.86□□□□□ -1.63
TMEM260-209ENST00000556079 TMEM140Q9NV12 185 aa4.86□□□□□ -1.63
TMEM260-209ENST00000556079 ZNF256Q9Y2P7 627 aaPredicted RBP4.86□□□□□ -1.63
TMEM260-209ENST00000556079 ALMS1Q8TCU4 4167 aa4.85□□□□□ -1.63
TMEM260-209ENST00000556079 DNAH10Q8IVF4 4471 aa4.85□□□□□ -1.63
TMEM260-209ENST00000556079 A0A0A6YYH2 397 aa4.85□□□□□ -1.63
TMEM260-209ENST00000556079 IGHV3-35A0A0C4DH35 117 aa4.85□□□□□ -1.63
TMEM260-209ENST00000556079 IGLC7A0M8Q6 106 aa4.85□□□□□ -1.63
TMEM260-209ENST00000556079 A6NJ64 397 aa4.85□□□□□ -1.63
TMEM260-209ENST00000556079 PGLYRP1O75594 196 aaPredicted RBP4.85□□□□□ -1.63
TMEM260-209ENST00000556079 OR2A4O95047 310 aa4.85□□□□□ -1.63
TMEM260-209ENST00000556079 SCGB1D2O95969 90 aa4.85□□□□□ -1.63
TMEM260-209ENST00000556079 CSN3P07498 182 aa4.85□□□□□ -1.63
TMEM260-209ENST00000556079 ZNF735P0CB33 412 aa4.85□□□□□ -1.63
TMEM260-209ENST00000556079 HLA-GP17693 338 aa4.85□□□□□ -1.63
TMEM260-209ENST00000556079 G6PCP35575 357 aa4.85□□□□□ -1.63
TMEM260-209ENST00000556079 PPP5CP53041 499 aa4.85□□□□□ -1.63
TMEM260-209ENST00000556079 ID3Q02535 119 aa4.85□□□□□ -1.63
TMEM260-209ENST00000556079 KLF5Q13887 457 aaPredicted RBP4.85□□□□□ -1.63
TMEM260-209ENST00000556079 LCE3BQ5TA77 95 aa4.85□□□□□ -1.63
TMEM260-209ENST00000556079 ZNF343Q6P1L6 599 aa4.85□□□□□ -1.63
TMEM260-209ENST00000556079 ZNF66Q6ZN08 573 aa4.85□□□□□ -1.63
TMEM260-209ENST00000556079 SBSPONQ8IVN8 264 aa4.85□□□□□ -1.63
TMEM260-209ENST00000556079 MMD2Q8IY49 270 aa4.85□□□□□ -1.63
TMEM260-209ENST00000556079 TCTEX1D1Q8N7M0 179 aa4.85□□□□□ -1.63
TMEM260-209ENST00000556079 GIMAP1Q8WWP7 306 aa4.85□□□□□ -1.63
TMEM260-209ENST00000556079 FCAMRQ8WWV6 532 aa4.85□□□□□ -1.63
TMEM260-209ENST00000556079 MRGPRFQ96AM1 343 aa4.85□□□□□ -1.63
TMEM260-209ENST00000556079 MOB3AQ96BX8 217 aa4.85□□□□□ -1.63
TMEM260-209ENST00000556079 OR2A7Q96R45 310 aa4.85□□□□□ -1.63
TMEM260-209ENST00000556079 ABHD1Q96SE0 405 aa4.85□□□□□ -1.63
TMEM260-209ENST00000556079 KRTAP4-12Q9BQ66 201 aa4.85□□□□□ -1.63
TMEM260-209ENST00000556079 MRPS26Q9BYN8 205 aaKnown RBP4.85□□□□□ -1.63
TMEM260-209ENST00000556079 HRASLSQ9HDD0 168 aa4.85□□□□□ -1.63
TMEM260-209ENST00000556079 EXTL2Q9UBQ6 330 aa4.85□□□□□ -1.63
TMEM260-209ENST00000556079 KLK11Q9UBX7 282 aa4.85□□□□□ -1.63
TMEM260-209ENST00000556079 FBXL7Q9UJT9 491 aa4.85□□□□□ -1.63
TMEM260-209ENST00000556079 PRELID3BQ9Y3B1 194 aa4.85□□□□□ -1.63
TMEM260-209ENST00000556079 U3KQK5 164 aa4.85□□□□□ -1.63
TMEM260-209ENST00000556079 FRAS1Q86XX4 4008 aa4.85□□□□□ -1.63
TMEM260-209ENST00000556079 IGHV3OR16-8A0A075B7F1 116 aa4.84□□□□□ -1.63
TMEM260-209ENST00000556079 TRBV9A0A0B4J1U6 114 aa4.84□□□□□ -1.63
TMEM260-209ENST00000556079 UPK2O00526 184 aa4.84□□□□□ -1.63
TMEM260-209ENST00000556079 OR2C1O95371 312 aa4.84□□□□□ -1.63
TMEM260-209ENST00000556079 KRASP01116 189 aa4.84□□□□□ -1.63
TMEM260-209ENST00000556079 IGHV3-48P01763 117 aa4.84□□□□□ -1.63
TMEM260-209ENST00000556079 APOA1P02647 267 aa4.84□□□□□ -1.63
TMEM260-209ENST00000556079 CD3DP04234 171 aa4.84□□□□□ -1.63
TMEM260-209ENST00000556079 GP9P14770 177 aa4.84□□□□□ -1.63
TMEM260-209ENST00000556079 RANBP1P43487 201 aa4.84□□□□□ -1.63
TMEM260-209ENST00000556079 CBX5P45973 191 aa4.84□□□□□ -1.63
TMEM260-209ENST00000556079 RORCP51449 518 aa4.84□□□□□ -1.63
TMEM260-209ENST00000556079 RPL8P62917 257 aaKnown RBP4.84□□□□□ -1.63
TMEM260-209ENST00000556079 ATP5G2Q06055 141 aa4.84□□□□□ -1.63
TMEM260-209ENST00000556079 C15orf32Q32M92 178 aa4.84□□□□□ -1.63
TMEM260-209ENST00000556079 PYHIN1Q6K0P9 492 aa4.84□□□□□ -1.63
TMEM260-209ENST00000556079 DHRS11Q6UWP2 260 aa4.84□□□□□ -1.63
TMEM260-209ENST00000556079 CLEC19AQ6UXS0 136 aa4.84□□□□□ -1.63
TMEM260-209ENST00000556079 GPR141Q7Z602 305 aa4.84□□□□□ -1.63
TMEM260-209ENST00000556079 TBC1D26Q86UD7 250 aa4.84□□□□□ -1.63
TMEM260-209ENST00000556079 Q8N1Y9 231 aa4.84□□□□□ -1.63
TMEM260-209ENST00000556079 TTC9CQ8N5M4 171 aa4.84□□□□□ -1.63
TMEM260-209ENST00000556079 ZNF414Q96IQ9 312 aa4.84□□□□□ -1.63
TMEM260-209ENST00000556079 CLUHP3Q96NS8 147 aa4.84□□□□□ -1.63
TMEM260-209ENST00000556079 HINT2Q9BX68 163 aa4.84□□□□□ -1.63
TMEM260-209ENST00000556079 SLA2Q9H6Q3 261 aa4.84□□□□□ -1.63
TMEM260-209ENST00000556079 RETNQ9HD89 108 aa4.84□□□□□ -1.63
TMEM260-209ENST00000556079 PRR13Q9NZ81 148 aa4.84□□□□□ -1.63
TMEM260-209ENST00000556079 PEF1Q9UBV8 284 aaKnown RBP4.84□□□□□ -1.63
TMEM260-209ENST00000556079 HERC2O95714 4834 aa4.84□□□□□ -1.63
TMEM260-209ENST00000556079 RYR1P21817 5038 aa4.83□□□□□ -1.64
TMEM260-209ENST00000556079 IGLV11-55A0A075B6I3 123 aa4.83□□□□□ -1.64
TMEM260-209ENST00000556079 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms