RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 CMTM1Q8IZ96 169 aa18.61■□□□□ 0.57
PRKCH-216ENST00000555542 DYNLRB2Q8TF09 96 aa18.61■□□□□ 0.57
PRKCH-216ENST00000555542 EEF1AKMT3Q96AZ1 226 aa18.61■□□□□ 0.57
PRKCH-216ENST00000555542 SIGLEC8Q9NYZ4 499 aa18.61■□□□□ 0.57
PRKCH-216ENST00000555542 COMMD9Q9P000 198 aa18.61■□□□□ 0.57
PRKCH-216ENST00000555542 S4R3C0 116 aa18.61■□□□□ 0.57
PRKCH-216ENST00000555542 UPK2O00526 184 aa18.6■□□□□ 0.57
PRKCH-216ENST00000555542 GGCTO75223 188 aaKnown RBP18.6■□□□□ 0.57
PRKCH-216ENST00000555542 NDUFB8O95169 186 aa18.6■□□□□ 0.57
PRKCH-216ENST00000555542 APOA1P02647 267 aa18.6■□□□□ 0.57
PRKCH-216ENST00000555542 CRYGCP07315 174 aa18.6■□□□□ 0.57
PRKCH-216ENST00000555542 NAT1P18440 290 aa18.6■□□□□ 0.57
PRKCH-216ENST00000555542 HRH1P35367 487 aa18.6■□□□□ 0.57
PRKCH-216ENST00000555542 TSPAN5P62079 268 aa18.6■□□□□ 0.57
PRKCH-216ENST00000555542 Q8N1Y9 231 aa18.6■□□□□ 0.57
PRKCH-216ENST00000555542 TRAV3A0A0B4J244 114 aa18.59■□□□□ 0.57
PRKCH-216ENST00000555542 PGLYRP1O75594 196 aaPredicted RBP18.59■□□□□ 0.57
PRKCH-216ENST00000555542 HLA-AP01891 365 aaKnown RBP18.59■□□□□ 0.57
PRKCH-216ENST00000555542 CTRB1P17538 263 aa18.59■□□□□ 0.57
PRKCH-216ENST00000555542 ARL3P36405 182 aa18.59■□□□□ 0.57
PRKCH-216ENST00000555542 OR2B8PP59922 312 aa18.59■□□□□ 0.57
PRKCH-216ENST00000555542 POU2AF1Q16633 256 aa18.59■□□□□ 0.57
PRKCH-216ENST00000555542 CTRB2Q6GPI1 263 aa18.59■□□□□ 0.57
PRKCH-216ENST00000555542 CLEC19AQ6UXS0 136 aa18.59■□□□□ 0.57
PRKCH-216ENST00000555542 CMTM3Q96MX0 182 aa18.59■□□□□ 0.57
PRKCH-216ENST00000555542 FANCD2OSQ96PS1 177 aa18.59■□□□□ 0.57
PRKCH-216ENST00000555542 OR2C1O95371 312 aa18.58■□□□□ 0.56
PRKCH-216ENST00000555542 S100GP29377 79 aa18.58■□□□□ 0.56
PRKCH-216ENST00000555542 RORCP51449 518 aa18.58■□□□□ 0.56
PRKCH-216ENST00000555542 FXYD6Q9H0Q3 95 aa18.58■□□□□ 0.56
PRKCH-216ENST00000555542 CGB1A6NKQ9 187 aa18.57■□□□□ 0.56
PRKCH-216ENST00000555542 FAM25AB3EWG3 89 aa18.57■□□□□ 0.56
PRKCH-216ENST00000555542 FAM25CB3EWG5 89 aa18.57■□□□□ 0.56
PRKCH-216ENST00000555542 FAM25GB3EWG6 89 aa18.57■□□□□ 0.56
PRKCH-216ENST00000555542 GPR31O00270 319 aa18.57■□□□□ 0.56
PRKCH-216ENST00000555542 HPGDSO60760 199 aa18.57■□□□□ 0.56
PRKCH-216ENST00000555542 F2RP25116 425 aa18.57■□□□□ 0.56
PRKCH-216ENST00000555542 OR2K2Q8NGT1 345 aa18.57■□□□□ 0.56
PRKCH-216ENST00000555542 GPX8Q8TED1 209 aa18.57■□□□□ 0.56
PRKCH-216ENST00000555542 QTRT1Q9BXR0 403 aaKnown RBP18.57■□□□□ 0.56
PRKCH-216ENST00000555542 TUBA4BQ9H853 241 aa18.57■□□□□ 0.56
PRKCH-216ENST00000555542 SCPEP1Q9HB40 452 aa18.57■□□□□ 0.56
PRKCH-216ENST00000555542 IZUMO1RA6ND01 250 aa18.56■□□□□ 0.56
PRKCH-216ENST00000555542 MARCH11A6NNE9 402 aa18.56■□□□□ 0.56
PRKCH-216ENST00000555542 CYB5BO43169 146 aa18.56■□□□□ 0.56
PRKCH-216ENST00000555542 LPAR6P43657 344 aa18.56■□□□□ 0.56
PRKCH-216ENST00000555542 MZT2AQ6P582 158 aa18.56■□□□□ 0.56
PRKCH-216ENST00000555542 LYSMD2Q8IV50 215 aa18.56■□□□□ 0.56
PRKCH-216ENST00000555542 DGCR14Q96DF8 476 aaKnown RBP18.56■□□□□ 0.56
PRKCH-216ENST00000555542 CXorf58Q96LI9 332 aa18.56■□□□□ 0.56
PRKCH-216ENST00000555542 CCDC140Q96MF4 163 aa18.56■□□□□ 0.56
PRKCH-216ENST00000555542 THYN1Q9P016 225 aa18.56■□□□□ 0.56
PRKCH-216ENST00000555542 IGLV11-55A0A075B6I3 123 aa18.55■□□□□ 0.56
PRKCH-216ENST00000555542 ZNF320A2RRD8 509 aa18.55■□□□□ 0.56
PRKCH-216ENST00000555542 KRASP01116 189 aa18.55■□□□□ 0.56
PRKCH-216ENST00000555542 ELK1P19419 428 aa18.55■□□□□ 0.56
PRKCH-216ENST00000555542 RCVRNP35243 200 aa18.55■□□□□ 0.56
PRKCH-216ENST00000555542 CD300EQ496F6 205 aaPredicted RBP18.55■□□□□ 0.56
PRKCH-216ENST00000555542 PHLDA2Q53GA4 152 aa18.55■□□□□ 0.56
PRKCH-216ENST00000555542 LPCAT3Q6P1A2 487 aa18.55■□□□□ 0.56
PRKCH-216ENST00000555542 FCAMRQ8WWV6 532 aa18.55■□□□□ 0.56
PRKCH-216ENST00000555542 AP3S1Q92572 193 aa18.55■□□□□ 0.56
PRKCH-216ENST00000555542 SRSF8Q9BRL6 282 aaKnown RBP18.55■□□□□ 0.56
PRKCH-216ENST00000555542 HINT2Q9BX68 163 aa18.55■□□□□ 0.56
PRKCH-216ENST00000555542 TRBV7-1A0A0A6YYK4 115 aa18.54■□□□□ 0.56
PRKCH-216ENST00000555542 IGLC7A0M8Q6 106 aa18.54■□□□□ 0.56
PRKCH-216ENST00000555542 C2orf70A6NJV1 201 aa18.54■□□□□ 0.56
PRKCH-216ENST00000555542 A8MZ25 164 aa18.54■□□□□ 0.56
PRKCH-216ENST00000555542 SNAPC5O75971 98 aa18.54■□□□□ 0.56
PRKCH-216ENST00000555542 FGF2P09038 288 aa18.54■□□□□ 0.56
PRKCH-216ENST00000555542 FAM106AQ4KMX7 169 aa18.54■□□□□ 0.56
PRKCH-216ENST00000555542 THOC7Q6I9Y2 204 aaKnown RBP18.54■□□□□ 0.56
PRKCH-216ENST00000555542 C19orf73Q9NVV2 129 aa18.54■□□□□ 0.56
PRKCH-216ENST00000555542 DMRT1Q9Y5R6 373 aa18.54■□□□□ 0.56
PRKCH-216ENST00000555542 MFSD2BA6NFX1 497 aa18.53■□□□□ 0.56
PRKCH-216ENST00000555542 LGALS9O00182 355 aa18.53■□□□□ 0.56
PRKCH-216ENST00000555542 TRAPPC2P0DI81 140 aa18.53■□□□□ 0.56
PRKCH-216ENST00000555542 TRAPPC2BP0DI82 140 aa18.53■□□□□ 0.56
PRKCH-216ENST00000555542 FOLR2P14207 255 aa18.53■□□□□ 0.56
PRKCH-216ENST00000555542 G6PCP35575 357 aa18.53■□□□□ 0.56
PRKCH-216ENST00000555542 RNASE12Q5GAN4 147 aaKnown RBP18.53■□□□□ 0.56
PRKCH-216ENST00000555542 GPHB5Q86YW7 130 aa18.53■□□□□ 0.56
PRKCH-216ENST00000555542 OR10W1Q8NGF6 305 aa18.53■□□□□ 0.56
PRKCH-216ENST00000555542 OR1L8Q8NGR8 309 aa18.53■□□□□ 0.56
PRKCH-216ENST00000555542 ZC4H2Q9NQZ6 224 aa18.53■□□□□ 0.56
PRKCH-216ENST00000555542 OR13C7P0DN81 318 aa18.52■□□□□ 0.56
PRKCH-216ENST00000555542 CD81P60033 236 aa18.52■□□□□ 0.56
PRKCH-216ENST00000555542 GUCA2BQ16661 112 aa18.52■□□□□ 0.56
PRKCH-216ENST00000555542 ADAMTSL5Q6ZMM2 481 aa18.52■□□□□ 0.56
PRKCH-216ENST00000555542 HSD17B13Q7Z5P4 300 aaPredicted RBP18.52■□□□□ 0.56
PRKCH-216ENST00000555542 NAA50Q9GZZ1 169 aaKnown RBP18.52■□□□□ 0.56
PRKCH-216ENST00000555542 SLC2A8Q9NY64 477 aa18.52■□□□□ 0.56
PRKCH-216ENST00000555542 NSG2Q9Y328 171 aa18.52■□□□□ 0.56
PRKCH-216ENST00000555542 TEX50A0A1B0GTY4 177 aa18.51■□□□□ 0.55
PRKCH-216ENST00000555542 C3orf84H3BNL1 204 aa18.51■□□□□ 0.55
PRKCH-216ENST00000555542 GABARAPO95166 117 aa18.51■□□□□ 0.55
PRKCH-216ENST00000555542 CLEC3BP05452 202 aa18.51■□□□□ 0.55
PRKCH-216ENST00000555542 SMIM18P0DKX4 95 aa18.51■□□□□ 0.55
PRKCH-216ENST00000555542 EDN2P20800 178 aa18.51■□□□□ 0.55
PRKCH-216ENST00000555542 GPR183P32249 361 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms