RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 OR2B8PP59922 312 aa9.02□□□□□ -0.97
VRK1-204ENST00000555351 VBP1P61758 197 aa9.02□□□□□ -0.97
VRK1-204ENST00000555351 AADACL3Q5VUY0 350 aa9.02□□□□□ -0.97
VRK1-204ENST00000555351 LCN12Q6JVE5 192 aa9.02□□□□□ -0.97
VRK1-204ENST00000555351 SSX9Q7RTT3 188 aa9.02□□□□□ -0.97
VRK1-204ENST00000555351 LAX1Q8IWV1 398 aa9.02□□□□□ -0.97
VRK1-204ENST00000555351 Q8N1Y9 231 aa9.02□□□□□ -0.97
VRK1-204ENST00000555351 C15orf40Q8WUR7 153 aa9.02□□□□□ -0.97
VRK1-204ENST00000555351 CXorf58Q96LI9 332 aa9.02□□□□□ -0.97
VRK1-204ENST00000555351 FANCD2OSQ96PS1 177 aa9.02□□□□□ -0.97
VRK1-204ENST00000555351 RSRP1Q9BUV0 290 aa9.02□□□□□ -0.97
VRK1-204ENST00000555351 COMMD5Q9GZQ3 224 aa9.02□□□□□ -0.97
VRK1-204ENST00000555351 HRASLSQ9HDD0 168 aa9.02□□□□□ -0.97
VRK1-204ENST00000555351 COMMD3Q9UBI1 195 aa9.02□□□□□ -0.97
VRK1-204ENST00000555351 FBXL7Q9UJT9 491 aa9.02□□□□□ -0.97
VRK1-204ENST00000555351 DMRT1Q9Y5R6 373 aa9.02□□□□□ -0.97
VRK1-204ENST00000555351 IGLV11-55A0A075B6I3 123 aa9.01□□□□□ -0.97
VRK1-204ENST00000555351 TRBV7-1A0A0A6YYK4 115 aa9.01□□□□□ -0.97
VRK1-204ENST00000555351 CGB1A6NKQ9 187 aa9.01□□□□□ -0.97
VRK1-204ENST00000555351 GPR31O00270 319 aa9.01□□□□□ -0.97
VRK1-204ENST00000555351 OR2J3O76001 311 aa9.01□□□□□ -0.97
VRK1-204ENST00000555351 PMP2P02689 132 aa9.01□□□□□ -0.97
VRK1-204ENST00000555351 PRH1P02810 166 aa9.01□□□□□ -0.97
VRK1-204ENST00000555351 FRMD6-AS1P0C7T7 363 aa9.01□□□□□ -0.97
VRK1-204ENST00000555351 HRH1P35367 487 aa9.01□□□□□ -0.97
VRK1-204ENST00000555351 UCP3P55916 312 aa9.01□□□□□ -0.97
VRK1-204ENST00000555351 ERVK-16P61578 105 aa9.01□□□□□ -0.97
VRK1-204ENST00000555351 DEFA5Q01523 94 aa9.01□□□□□ -0.97
VRK1-204ENST00000555351 CTF1Q16619 201 aa9.01□□□□□ -0.97
VRK1-204ENST00000555351 GPHB5Q86YW7 130 aa9.01□□□□□ -0.97
VRK1-204ENST00000555351 SGPP2Q8IWX5 399 aa9.01□□□□□ -0.97
VRK1-204ENST00000555351 DMBX1Q8NFW5 382 aa9.01□□□□□ -0.97
VRK1-204ENST00000555351 OR51H1Q8NH63 302 aa9.01□□□□□ -0.97
VRK1-204ENST00000555351 DGCR14Q96DF8 476 aaKnown RBP9.01□□□□□ -0.97
VRK1-204ENST00000555351 ATP6V0BQ99437 205 aa9.01□□□□□ -0.97
VRK1-204ENST00000555351 TMEM140Q9NV12 185 aa9.01□□□□□ -0.97
VRK1-204ENST00000555351 THYN1Q9P016 225 aa9.01□□□□□ -0.97
VRK1-204ENST00000555351 TENM3Q9P273 2699 aa9.01□□□□□ -0.97
VRK1-204ENST00000555351 IGLC7A0M8Q6 106 aa9□□□□□ -0.97
VRK1-204ENST00000555351 MARCH11A6NNE9 402 aa9□□□□□ -0.97
VRK1-204ENST00000555351 S1PR2O95136 353 aa9□□□□□ -0.97
VRK1-204ENST00000555351 FCER2P06734 321 aa9□□□□□ -0.97
VRK1-204ENST00000555351 SMIM18P0DKX4 95 aa9□□□□□ -0.97
VRK1-204ENST00000555351 DEFA4P12838 97 aa9□□□□□ -0.97
VRK1-204ENST00000555351 AREGP15514 252 aa9□□□□□ -0.97
VRK1-204ENST00000555351 ZNF182P17025 639 aaPredicted RBP9□□□□□ -0.97
VRK1-204ENST00000555351 ELK1P19419 428 aa9□□□□□ -0.97
VRK1-204ENST00000555351 TBPP20226 339 aa9□□□□□ -0.97
VRK1-204ENST00000555351 PTBP1P26599 531 aaKnown RBP eCLIP9□□□□□ -0.97
VRK1-204ENST00000555351 EEF1AKMT3Q96AZ1 226 aa9□□□□□ -0.97
VRK1-204ENST00000555351 TSC22D3Q99576 134 aa9□□□□□ -0.97
VRK1-204ENST00000555351 THAP7Q9BT49 309 aaPredicted RBP9□□□□□ -0.97
VRK1-204ENST00000555351 QTRT1Q9BXR0 403 aaKnown RBP9□□□□□ -0.97
VRK1-204ENST00000555351 FXYD6Q9H0Q3 95 aa9□□□□□ -0.97
VRK1-204ENST00000555351 C19orf73Q9NVV2 129 aa9□□□□□ -0.97
VRK1-204ENST00000555351 FKBP11Q9NYL4 201 aa9□□□□□ -0.97
VRK1-204ENST00000555351 TECRQ9NZ01 308 aaKnown RBP9□□□□□ -0.97
VRK1-204ENST00000555351 A8MWP6 167 aa8.99□□□□□ -0.97
VRK1-204ENST00000555351 HPGDSO60760 199 aa8.99□□□□□ -0.97
VRK1-204ENST00000555351 NDUFB8O95169 186 aa8.99□□□□□ -0.97
VRK1-204ENST00000555351 RLN1P04808 185 aa8.99□□□□□ -0.97
VRK1-204ENST00000555351 TRAPPC2P0DI81 140 aa8.99□□□□□ -0.97
VRK1-204ENST00000555351 TRAPPC2BP0DI82 140 aa8.99□□□□□ -0.97
VRK1-204ENST00000555351 IGHV4-30-4P0DP06 118 aa8.99□□□□□ -0.97
VRK1-204ENST00000555351 HLA-DMAP28067 261 aa8.99□□□□□ -0.97
VRK1-204ENST00000555351 TSPAN5P62079 268 aa8.99□□□□□ -0.97
VRK1-204ENST00000555351 FAM106AQ4KMX7 169 aa8.99□□□□□ -0.97
VRK1-204ENST00000555351 ZNF585BQ52M93 769 aa8.99□□□□□ -0.97
VRK1-204ENST00000555351 GPR107Q5VW38 600 aa8.99□□□□□ -0.97
VRK1-204ENST00000555351 GTSCR1Q86UQ5 136 aa8.99□□□□□ -0.97
VRK1-204ENST00000555351 SBSPONQ8IVN8 264 aa8.99□□□□□ -0.97
VRK1-204ENST00000555351 SLC38A6Q8IZM9 456 aa8.99□□□□□ -0.97
VRK1-204ENST00000555351 OR1L8Q8NGR8 309 aa8.99□□□□□ -0.97
VRK1-204ENST00000555351 CCDC140Q96MF4 163 aa8.99□□□□□ -0.97
VRK1-204ENST00000555351 MRPS26Q9BYN8 205 aaKnown RBP8.99□□□□□ -0.97
VRK1-204ENST00000555351 ZMAT4Q9H898 229 aa8.99□□□□□ -0.97
VRK1-204ENST00000555351 TRAV3A0A0B4J244 114 aa8.98□□□□□ -0.97
VRK1-204ENST00000555351 SNAPC5O75971 98 aa8.98□□□□□ -0.97
VRK1-204ENST00000555351 SERPINE2P07093 398 aa8.98□□□□□ -0.97
VRK1-204ENST00000555351 ARL3P36405 182 aa8.98□□□□□ -0.97
VRK1-204ENST00000555351 LPAR6P43657 344 aa8.98□□□□□ -0.97
VRK1-204ENST00000555351 ALDH3B2P48448 385 aa8.98□□□□□ -0.97
VRK1-204ENST00000555351 SNX29P2Q8IUI4 249 aa8.98□□□□□ -0.97
VRK1-204ENST00000555351 ARRDC1Q8N5I2 433 aa8.98□□□□□ -0.97
VRK1-204ENST00000555351 GDPD1Q8N9F7 314 aa8.98□□□□□ -0.97
VRK1-204ENST00000555351 OR1L6Q8NGR2 347 aa8.98□□□□□ -0.97
VRK1-204ENST00000555351 OR5B3Q8NH48 314 aa8.98□□□□□ -0.97
VRK1-204ENST00000555351 VN1R17PQ8TDU5 208 aa8.98□□□□□ -0.97
VRK1-204ENST00000555351 FCAMRQ8WWV6 532 aa8.98□□□□□ -0.97
VRK1-204ENST00000555351 ZNF486Q96H40 463 aaPredicted RBP8.98□□□□□ -0.97
VRK1-204ENST00000555351 ASCL2Q99929 193 aa8.98□□□□□ -0.97
VRK1-204ENST00000555351 TM2D3Q9BRN9 247 aa8.98□□□□□ -0.97
VRK1-204ENST00000555351 ZC4H2Q9NQZ6 224 aa8.98□□□□□ -0.97
VRK1-204ENST00000555351 NDUFA4L2Q9NRX3 87 aa8.98□□□□□ -0.97
VRK1-204ENST00000555351 PRNDQ9UKY0 176 aa8.98□□□□□ -0.97
VRK1-204ENST00000555351 TEX50A0A1B0GTY4 177 aa8.97□□□□□ -0.97
VRK1-204ENST00000555351 C2orf70A6NJV1 201 aa8.97□□□□□ -0.97
VRK1-204ENST00000555351 PPP5D1E7EU14 171 aa8.97□□□□□ -0.97
VRK1-204ENST00000555351 C3orf84H3BNL1 204 aa8.97□□□□□ -0.97
VRK1-204ENST00000555351 KRASP01116 189 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms