RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 SPIN2AQ99865 258 aa12.98□□□□□ -0.33
SPTLC2-203ENST00000554901 SPIN2BQ9BPZ2 258 aa12.98□□□□□ -0.33
SPTLC2-203ENST00000554901 SEC22CQ9BRL7 303 aa12.98□□□□□ -0.33
SPTLC2-203ENST00000554901 GON7Q9BXV9 100 aa12.98□□□□□ -0.33
SPTLC2-203ENST00000554901 COMMD5Q9GZQ3 224 aa12.98□□□□□ -0.33
SPTLC2-203ENST00000554901 SERTAD4Q9NUC0 356 aa12.98□□□□□ -0.33
SPTLC2-203ENST00000554901 TMEM14BQ9NUH8 114 aa12.98□□□□□ -0.33
SPTLC2-203ENST00000554901 COA4Q9NYJ1 87 aa12.98□□□□□ -0.33
SPTLC2-203ENST00000554901 ZNF257Q9Y2Q1 563 aa12.98□□□□□ -0.33
SPTLC2-203ENST00000554901 TNCP24821 2201 aa12.98□□□□□ -0.33
SPTLC2-203ENST00000554901 TMEM89A2RUT3 159 aa12.98□□□□□ -0.33
SPTLC2-203ENST00000554901 CLPSL1A2RUU4 121 aa12.98□□□□□ -0.33
SPTLC2-203ENST00000554901 DBX1A6NMT0 343 aa12.98□□□□□ -0.33
SPTLC2-203ENST00000554901 OR9G9P0C7N8 305 aa12.98□□□□□ -0.33
SPTLC2-203ENST00000554901 TMEM267Q0VDI3 215 aaPredicted RBP12.98□□□□□ -0.33
SPTLC2-203ENST00000554901 AARDQ4LEZ3 155 aa12.98□□□□□ -0.33
SPTLC2-203ENST00000554901 C12orf45Q8N5I9 185 aaPredicted RBP12.98□□□□□ -0.33
SPTLC2-203ENST00000554901 SGMS2Q8NHU3 365 aa12.98□□□□□ -0.33
SPTLC2-203ENST00000554901 SRSF8Q9BRL6 282 aaKnown RBP12.98□□□□□ -0.33
SPTLC2-203ENST00000554901 FOXA2Q9Y261 457 aaPredicted RBP12.98□□□□□ -0.33
SPTLC2-203ENST00000554901 TRAV3A0A0B4J244 114 aa12.97□□□□□ -0.33
SPTLC2-203ENST00000554901 A0A0G2JRQ6 117 aa12.97□□□□□ -0.33
SPTLC2-203ENST00000554901 A0A1B0GU03 582 aa12.97□□□□□ -0.33
SPTLC2-203ENST00000554901 C7orf66A4D0T2 115 aa12.97□□□□□ -0.33
SPTLC2-203ENST00000554901 IFNA21P01568 189 aa12.97□□□□□ -0.33
SPTLC2-203ENST00000554901 SULT1A3P0DMM9 295 aa12.97□□□□□ -0.33
SPTLC2-203ENST00000554901 SULT1A4P0DMN0 295 aa12.97□□□□□ -0.33
SPTLC2-203ENST00000554901 RPL27AP46776 148 aaKnown RBP12.97□□□□□ -0.33
SPTLC2-203ENST00000554901 GNB1P62873 340 aa12.97□□□□□ -0.33
SPTLC2-203ENST00000554901 TATDN3Q17R31 274 aa12.97□□□□□ -0.33
SPTLC2-203ENST00000554901 OR1L8Q8NGR8 309 aa12.97□□□□□ -0.33
SPTLC2-203ENST00000554901 SRSF12Q8WXF0 261 aaKnown RBP12.97□□□□□ -0.33
SPTLC2-203ENST00000554901 GPR146Q96CH1 333 aa12.97□□□□□ -0.33
SPTLC2-203ENST00000554901 PARP11Q9NR21 331 aa12.97□□□□□ -0.33
SPTLC2-203ENST00000554901 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.97□□□□□ -0.33
SPTLC2-203ENST00000554901 A0A0B4J293 547 aa12.96□□□□□ -0.33
SPTLC2-203ENST00000554901 ATP6V0E1O15342 81 aa12.96□□□□□ -0.33
SPTLC2-203ENST00000554901 NDPQ00604 133 aa12.96□□□□□ -0.33
SPTLC2-203ENST00000554901 AKIRIN2Q53H80 203 aa12.96□□□□□ -0.33
SPTLC2-203ENST00000554901 HSD17B13Q7Z5P4 300 aaPredicted RBP12.96□□□□□ -0.33
SPTLC2-203ENST00000554901 STPG2Q8N412 459 aa12.96□□□□□ -0.33
SPTLC2-203ENST00000554901 WNT10AQ9GZT5 417 aa12.96□□□□□ -0.33
SPTLC2-203ENST00000554901 OR51B2Q9Y5P1 312 aa12.96□□□□□ -0.33
SPTLC2-203ENST00000554901 LINC01548A6NM66 108 aa12.95□□□□□ -0.34
SPTLC2-203ENST00000554901 RBMXL2O75526 392 aaKnown RBP12.95□□□□□ -0.34
SPTLC2-203ENST00000554901 HOXB5P09067 269 aa12.95□□□□□ -0.34
SPTLC2-203ENST00000554901 EGR2P11161 476 aaPredicted RBP12.95□□□□□ -0.34
SPTLC2-203ENST00000554901 HSPE1P61604 102 aaKnown RBP12.95□□□□□ -0.34
SPTLC2-203ENST00000554901 SMCO1Q147U7 214 aa12.95□□□□□ -0.34
SPTLC2-203ENST00000554901 GGNBP1Q5YKI7 109 aa12.95□□□□□ -0.34
SPTLC2-203ENST00000554901 OR52E5Q8NH55 327 aa12.95□□□□□ -0.34
SPTLC2-203ENST00000554901 GRPEL2Q8TAA5 225 aa12.95□□□□□ -0.34
SPTLC2-203ENST00000554901 C19orf24Q9BVV8 132 aa12.95□□□□□ -0.34
SPTLC2-203ENST00000554901 QTRT1Q9BXR0 403 aaKnown RBP12.95□□□□□ -0.34
SPTLC2-203ENST00000554901 CACNG5Q9UF02 275 aa12.95□□□□□ -0.34
SPTLC2-203ENST00000554901 NSG2Q9Y328 171 aa12.95□□□□□ -0.34
SPTLC2-203ENST00000554901 RNF114Q9Y508 228 aa12.95□□□□□ -0.34
SPTLC2-203ENST00000554901 TEX50A0A1B0GTY4 177 aa12.94□□□□□ -0.34
SPTLC2-203ENST00000554901 PLXNB1O43157 2135 aa12.94□□□□□ -0.34
SPTLC2-203ENST00000554901 OR2B8PP59922 312 aa12.94□□□□□ -0.34
SPTLC2-203ENST00000554901 IZUMO4Q1ZYL8 232 aa12.94□□□□□ -0.34
SPTLC2-203ENST00000554901 Q6ZRM9 215 aa12.94□□□□□ -0.34
SPTLC2-203ENST00000554901 MRPL41Q8IXM3 137 aaKnown RBP12.94□□□□□ -0.34
SPTLC2-203ENST00000554901 ABHD5Q8WTS1 349 aa12.94□□□□□ -0.34
SPTLC2-203ENST00000554901 PDCD10Q9BUL8 212 aa12.94□□□□□ -0.34
SPTLC2-203ENST00000554901 NDUFA4L2Q9NRX3 87 aa12.94□□□□□ -0.34
SPTLC2-203ENST00000554901 FBXO7Q9Y3I1 522 aa12.94□□□□□ -0.34
SPTLC2-203ENST00000554901 TRAV41A0A0B4J266 112 aa12.93□□□□□ -0.34
SPTLC2-203ENST00000554901 MSGN1A6NI15 193 aa12.93□□□□□ -0.34
SPTLC2-203ENST00000554901 TRAPPC2P0DI81 140 aa12.93□□□□□ -0.34
SPTLC2-203ENST00000554901 TRAPPC2BP0DI82 140 aa12.93□□□□□ -0.34
SPTLC2-203ENST00000554901 MDKP21741 143 aaPredicted RBP12.93□□□□□ -0.34
SPTLC2-203ENST00000554901 PROK1P58294 105 aa12.93□□□□□ -0.34
SPTLC2-203ENST00000554901 SLC35B1P78383 322 aa12.93□□□□□ -0.34
SPTLC2-203ENST00000554901 TMEM95Q3KNT9 176 aa12.93□□□□□ -0.34
SPTLC2-203ENST00000554901 PDLIM3Q53GG5 364 aaPredicted RBP12.93□□□□□ -0.34
SPTLC2-203ENST00000554901 C19orf54Q5BKX5 351 aa12.93□□□□□ -0.34
SPTLC2-203ENST00000554901 C10orf55Q5SWW7 151 aa12.93□□□□□ -0.34
SPTLC2-203ENST00000554901 COMMD1Q8N668 190 aa12.93□□□□□ -0.34
SPTLC2-203ENST00000554901 TAF15Q92804 592 aaKnown RBP eCLIP12.93□□□□□ -0.34
SPTLC2-203ENST00000554901 FAM90A26D6RGX4 464 aa12.93□□□□□ -0.34
SPTLC2-203ENST00000554901 ADAP1O75689 374 aa12.93□□□□□ -0.34
SPTLC2-203ENST00000554901 PRCDQ00LT1 54 aa12.93□□□□□ -0.34
SPTLC2-203ENST00000554901 UXS1Q8NBZ7 420 aa12.93□□□□□ -0.34
SPTLC2-203ENST00000554901 LFNGQ8NES3 379 aa12.93□□□□□ -0.34
SPTLC2-203ENST00000554901 NOL4LQ96MY1 436 aaPredicted RBP12.93□□□□□ -0.34
SPTLC2-203ENST00000554901 FAM103A1Q9BTL3 118 aaKnown RBP12.93□□□□□ -0.34
SPTLC2-203ENST00000554901 A0A1W2PN81 502 aa12.92□□□□□ -0.34
SPTLC2-203ENST00000554901 TEX22C9J3V5 150 aa12.92□□□□□ -0.34
SPTLC2-203ENST00000554901 INS-IGF2F8WCM5 200 aa12.92□□□□□ -0.34
SPTLC2-203ENST00000554901 ST8SIA3O43173 380 aa12.92□□□□□ -0.34
SPTLC2-203ENST00000554901 PITX3O75364 302 aa12.92□□□□□ -0.34
SPTLC2-203ENST00000554901 IFNA17P01571 189 aa12.92□□□□□ -0.34
SPTLC2-203ENST00000554901 CHRNA7P36544 502 aa12.92□□□□□ -0.34
SPTLC2-203ENST00000554901 SPCS3P61009 180 aa12.92□□□□□ -0.34
SPTLC2-203ENST00000554901 CFHR3Q02985 330 aa12.92□□□□□ -0.34
SPTLC2-203ENST00000554901 KRTAP21-3Q3LHN1 58 aa12.92□□□□□ -0.34
SPTLC2-203ENST00000554901 UNQ5815/PRO19632Q6UWF5 114 aa12.92□□□□□ -0.34
SPTLC2-203ENST00000554901 CENPVQ7Z7K6 275 aaPredicted RBP12.92□□□□□ -0.34
SPTLC2-203ENST00000554901 OR5M8Q8NGP6 311 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms