RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 ZNF486Q96H40 463 aaPredicted RBP6.52□□□□□ -1.37
PSEN1-209ENST00000553855 UBE2E2Q96LR5 201 aa6.52□□□□□ -1.37
PSEN1-209ENST00000553855 ABHD1Q96SE0 405 aa6.52□□□□□ -1.37
PSEN1-209ENST00000553855 SPATA25Q9BR10 227 aa6.52□□□□□ -1.37
PSEN1-209ENST00000553855 MIXL1Q9H2W2 232 aa6.52□□□□□ -1.37
PSEN1-209ENST00000553855 COA4Q9NYJ1 87 aa6.52□□□□□ -1.37
PSEN1-209ENST00000553855 COMMD9Q9P000 198 aa6.52□□□□□ -1.37
PSEN1-209ENST00000553855 ZMAT5Q9UDW3 170 aaKnown RBP6.52□□□□□ -1.37
PSEN1-209ENST00000553855 NUBP2Q9Y5Y2 271 aa6.52□□□□□ -1.37
PSEN1-209ENST00000553855 MSGN1A6NI15 193 aa6.51□□□□□ -1.37
PSEN1-209ENST00000553855 PRSS29PA6NIE9 313 aa6.51□□□□□ -1.37
PSEN1-209ENST00000553855 SRRM4A7MD48 611 aaKnown RBP6.51□□□□□ -1.37
PSEN1-209ENST00000553855 CCL24O00175 119 aa6.51□□□□□ -1.37
PSEN1-209ENST00000553855 CYB5BO43169 146 aa6.51□□□□□ -1.37
PSEN1-209ENST00000553855 SNAPC5O75971 98 aa6.51□□□□□ -1.37
PSEN1-209ENST00000553855 KBTBD11O94819 623 aa6.51□□□□□ -1.37
PSEN1-209ENST00000553855 IGLV2-14P01704 120 aa6.51□□□□□ -1.37
PSEN1-209ENST00000553855 TRGV3P03979 118 aa6.51□□□□□ -1.37
PSEN1-209ENST00000553855 SERPINE2P07093 398 aa6.51□□□□□ -1.37
PSEN1-209ENST00000553855 CRYGBP07316 175 aa6.51□□□□□ -1.37
PSEN1-209ENST00000553855 AKAIN1P0CW23 69 aa6.51□□□□□ -1.37
PSEN1-209ENST00000553855 F2RP25116 425 aa6.51□□□□□ -1.37
PSEN1-209ENST00000553855 RPL27AP46776 148 aaKnown RBP6.51□□□□□ -1.37
PSEN1-209ENST00000553855 UCP3P55916 312 aa6.51□□□□□ -1.37
PSEN1-209ENST00000553855 AP3S2P59780 193 aa6.51□□□□□ -1.37
PSEN1-209ENST00000553855 RPL8P62917 257 aaKnown RBP6.51□□□□□ -1.37
PSEN1-209ENST00000553855 DGCR2P98153 550 aa6.51□□□□□ -1.37
PSEN1-209ENST00000553855 NDPQ00604 133 aa6.51□□□□□ -1.37
PSEN1-209ENST00000553855 CFHR3Q02985 330 aa6.51□□□□□ -1.37
PSEN1-209ENST00000553855 PHLDA2Q53GA4 152 aa6.51□□□□□ -1.37
PSEN1-209ENST00000553855 PYDC2Q56P42 97 aa6.51□□□□□ -1.37
PSEN1-209ENST00000553855 SPANXN2Q5MJ10 180 aa6.51□□□□□ -1.37
PSEN1-209ENST00000553855 OR5T1Q8NG75 326 aa6.51□□□□□ -1.37
PSEN1-209ENST00000553855 SMIM4Q8WVI0 70 aa6.51□□□□□ -1.37
PSEN1-209ENST00000553855 SRSF12Q8WXF0 261 aaKnown RBP6.51□□□□□ -1.37
PSEN1-209ENST00000553855 DGCR14Q96DF8 476 aaKnown RBP6.51□□□□□ -1.37
PSEN1-209ENST00000553855 MS4A10Q96PG2 267 aa6.51□□□□□ -1.37
PSEN1-209ENST00000553855 SCGB3A2Q96PL1 93 aa6.51□□□□□ -1.37
PSEN1-209ENST00000553855 FYTTD1Q96QD9 318 aaKnown RBP6.51□□□□□ -1.37
PSEN1-209ENST00000553855 GPHA2Q96T91 129 aa6.51□□□□□ -1.37
PSEN1-209ENST00000553855 TSC22D3Q99576 134 aa6.51□□□□□ -1.37
PSEN1-209ENST00000553855 COMMD5Q9GZQ3 224 aa6.51□□□□□ -1.37
PSEN1-209ENST00000553855 SLIRPQ9GZT3 109 aaKnown RBP6.51□□□□□ -1.37
PSEN1-209ENST00000553855 FXYD6Q9H0Q3 95 aa6.51□□□□□ -1.37
PSEN1-209ENST00000553855 ZNF430Q9H8G1 570 aaPredicted RBP6.51□□□□□ -1.37
PSEN1-209ENST00000553855 PLEKHA2Q9HB19 425 aa6.51□□□□□ -1.37
PSEN1-209ENST00000553855 COPZ2Q9P299 210 aa6.51□□□□□ -1.37
PSEN1-209ENST00000553855 SCP2D1Q9UJQ7 156 aa6.51□□□□□ -1.37
PSEN1-209ENST00000553855 C14orf166Q9Y224 244 aaKnown RBP6.51□□□□□ -1.37
PSEN1-209ENST00000553855 ARPC1BO15143 372 aaKnown RBP6.5□□□□□ -1.37
PSEN1-209ENST00000553855 OR8U8P0C7N1 319 aa6.5□□□□□ -1.37
PSEN1-209ENST00000553855 OR9G9P0C7N8 305 aa6.5□□□□□ -1.37
PSEN1-209ENST00000553855 HLA-GP17693 338 aa6.5□□□□□ -1.37
PSEN1-209ENST00000553855 TNFSF8P32971 234 aa6.5□□□□□ -1.37
PSEN1-209ENST00000553855 LPAR6P43657 344 aa6.5□□□□□ -1.37
PSEN1-209ENST00000553855 PPP5CP53041 499 aa6.5□□□□□ -1.37
PSEN1-209ENST00000553855 PJVKQ0ZLH3 352 aa6.5□□□□□ -1.37
PSEN1-209ENST00000553855 EIF4EBP1Q13541 118 aaPredicted RBP6.5□□□□□ -1.37
PSEN1-209ENST00000553855 TBC1D26Q86UD7 250 aa6.5□□□□□ -1.37
PSEN1-209ENST00000553855 VKORC1L1Q8N0U8 176 aa6.5□□□□□ -1.37
PSEN1-209ENST00000553855 ZNF491Q8N8L2 437 aa6.5□□□□□ -1.37
PSEN1-209ENST00000553855 OR11H1Q8NG94 326 aa6.5□□□□□ -1.37
PSEN1-209ENST00000553855 OR1N2Q8NGR9 330 aa6.5□□□□□ -1.37
PSEN1-209ENST00000553855 TERB2Q8NHR7 220 aa6.5□□□□□ -1.37
PSEN1-209ENST00000553855 TMEM167AQ8TBQ9 72 aa6.5□□□□□ -1.37
PSEN1-209ENST00000553855 OR5B12Q96R08 314 aa6.5□□□□□ -1.37
PSEN1-209ENST00000553855 PRRT1Q99946 306 aa6.5□□□□□ -1.37
PSEN1-209ENST00000553855 TINAGL1Q9GZM7 467 aaPredicted RBP6.5□□□□□ -1.37
PSEN1-209ENST00000553855 FAM212BQ9NTI7 297 aaPredicted RBP6.5□□□□□ -1.37
PSEN1-209ENST00000553855 BET1LQ9NYM9 111 aa6.5□□□□□ -1.37
PSEN1-209ENST00000553855 FBXO7Q9Y3I1 522 aa6.5□□□□□ -1.37
PSEN1-209ENST00000553855 MARCH11A6NNE9 402 aa6.49□□□□□ -1.37
PSEN1-209ENST00000553855 LINC01619G3V211 115 aa6.49□□□□□ -1.37
PSEN1-209ENST00000553855 GSTZ1O43708 216 aaPredicted RBP6.49□□□□□ -1.37
PSEN1-209ENST00000553855 RAMP3O60896 148 aa6.49□□□□□ -1.37
PSEN1-209ENST00000553855 RBMXL2O75526 392 aaKnown RBP6.49□□□□□ -1.37
PSEN1-209ENST00000553855 B3GALNT1O75752 331 aa6.49□□□□□ -1.37
PSEN1-209ENST00000553855 S1PR2O95136 353 aa6.49□□□□□ -1.37
PSEN1-209ENST00000553855 CD74P04233 296 aa6.49□□□□□ -1.37
PSEN1-209ENST00000553855 LGALS1P09382 135 aaKnown RBP6.49□□□□□ -1.37
PSEN1-209ENST00000553855 APELAP0DMC3 54 aa6.49□□□□□ -1.37
PSEN1-209ENST00000553855 EGR2P11161 476 aaPredicted RBP6.49□□□□□ -1.37
PSEN1-209ENST00000553855 DEFA4P12838 97 aa6.49□□□□□ -1.37
PSEN1-209ENST00000553855 RPA2P15927 270 aa6.49□□□□□ -1.37
PSEN1-209ENST00000553855 PTBP1P26599 531 aaKnown RBP eCLIP6.49□□□□□ -1.37
PSEN1-209ENST00000553855 DEFA6Q01524 100 aa6.49□□□□□ -1.37
PSEN1-209ENST00000553855 ZNF616Q08AN1 781 aa6.49□□□□□ -1.37
PSEN1-209ENST00000553855 MLANAQ16655 118 aa6.49□□□□□ -1.37
PSEN1-209ENST00000553855 TATDN3Q17R31 274 aa6.49□□□□□ -1.37
PSEN1-209ENST00000553855 THOC7Q6I9Y2 204 aaKnown RBP6.49□□□□□ -1.37
PSEN1-209ENST00000553855 OR4A47Q6IF82 309 aa6.49□□□□□ -1.37
PSEN1-209ENST00000553855 H2BFWTQ7Z2G1 175 aa6.49□□□□□ -1.37
PSEN1-209ENST00000553855 HSD17B13Q7Z5P4 300 aaPredicted RBP6.49□□□□□ -1.37
PSEN1-209ENST00000553855 PUSL1Q8N0Z8 303 aaKnown RBP6.49□□□□□ -1.37
PSEN1-209ENST00000553855 TOMM5Q8N4H5 51 aa6.49□□□□□ -1.37
PSEN1-209ENST00000553855 WFDC9Q8NEX5 89 aa6.49□□□□□ -1.37
PSEN1-209ENST00000553855 RNASE11Q8TAA1 199 aaKnown RBP6.49□□□□□ -1.37
PSEN1-209ENST00000553855 USMG5Q96IX5 58 aa6.49□□□□□ -1.37
PSEN1-209ENST00000553855 THAP7Q9BT49 309 aaPredicted RBP6.49□□□□□ -1.37
PSEN1-209ENST00000553855 NXF2Q9GZY0 626 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms