RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-223	ENST00000553686	SPART-AS1	P0CW21	52 aa		4.07	□□□□□ -1.76
ATXN3-223	ENST00000553686	CRISP1	P54107	249 aa		4.07	□□□□□ -1.76
ATXN3-223	ENST00000553686	HERV-K104	P61576	105 aa		4.07	□□□□□ -1.76
ATXN3-223	ENST00000553686	PHLDA2	Q53GA4	152 aa		4.07	□□□□□ -1.76
ATXN3-223	ENST00000553686	LY6G6F	Q5SQ64	297 aa		4.07	□□□□□ -1.76
ATXN3-223	ENST00000553686	ZNF322	Q6U7Q0	402 aa	Predicted RBP	4.07	□□□□□ -1.76
ATXN3-223	ENST00000553686	ARPIN	Q7Z6K5	226 aa		4.07	□□□□□ -1.76
ATXN3-223	ENST00000553686	CROCCP2	Q86T23	111 aa		4.07	□□□□□ -1.76
ATXN3-223	ENST00000553686	SLC25A42	Q86VD7	318 aa		4.07	□□□□□ -1.76
ATXN3-223	ENST00000553686	OR5D18	Q8NGL1	313 aa		4.07	□□□□□ -1.76
ATXN3-223	ENST00000553686	ZNRF2	Q8NHG8	242 aa		4.07	□□□□□ -1.76
ATXN3-223	ENST00000553686	NEK7	Q8TDX7	302 aa		4.07	□□□□□ -1.76
ATXN3-223	ENST00000553686	FAM46B	Q96A09	425 aa		4.07	□□□□□ -1.76
ATXN3-223	ENST00000553686	MCUR1	Q96AQ8	359 aa		4.07	□□□□□ -1.76
ATXN3-223	ENST00000553686	APOL4	Q9BPW4	351 aa		4.07	□□□□□ -1.76
ATXN3-223	ENST00000553686	CABLES2	Q9BTV7	478 aa		4.07	□□□□□ -1.76
ATXN3-223	ENST00000553686	SCRT1	Q9BWW7	348 aa		4.07	□□□□□ -1.76
ATXN3-223	ENST00000553686	MRGBP	Q9NV56	204 aa		4.07	□□□□□ -1.76
ATXN3-223	ENST00000553686	ARMC1	Q9NVT9	282 aa		4.07	□□□□□ -1.76
ATXN3-223	ENST00000553686	SMPD3	Q9NY59	655 aa	Predicted RBP	4.07	□□□□□ -1.76
ATXN3-223	ENST00000553686	NKIRAS1	Q9NYS0	192 aa		4.07	□□□□□ -1.76
ATXN3-223	ENST00000553686	KCNIP1	Q9NZI2	227 aa		4.07	□□□□□ -1.76
ATXN3-223	ENST00000553686	JPT1	Q9UK76	154 aa		4.07	□□□□□ -1.76
ATXN3-223	ENST00000553686	SAMD4A	Q9UPU9	718 aa	Known RBP	4.07	□□□□□ -1.76
ATXN3-223	ENST00000553686	LRRC42	Q9Y546	428 aa		4.07	□□□□□ -1.76
ATXN3-223	ENST00000553686	TEX48	A0A1B0GUV7	120 aa		4.06	□□□□□ -1.76
ATXN3-223	ENST00000553686	NDUFAB1	O14561	156 aa		4.06	□□□□□ -1.76
ATXN3-223	ENST00000553686	SNX3	O60493	162 aa		4.06	□□□□□ -1.76
ATXN3-223	ENST00000553686	YPEL1	O60688	119 aa		4.06	□□□□□ -1.76
ATXN3-223	ENST00000553686	OR7C1	O76099	320 aa	Predicted RBP	4.06	□□□□□ -1.76
ATXN3-223	ENST00000553686	HMGN1	P05114	100 aa		4.06	□□□□□ -1.76
ATXN3-223	ENST00000553686	REG1A	P05451	166 aa		4.06	□□□□□ -1.76
ATXN3-223	ENST00000553686	SAA2	P0DJI9	122 aa	Predicted RBP	4.06	□□□□□ -1.76
ATXN3-223	ENST00000553686	CT45A6	P0DMU7	189 aa		4.06	□□□□□ -1.76
ATXN3-223	ENST00000553686	CT45A5	P0DMU8	189 aa		4.06	□□□□□ -1.76
ATXN3-223	ENST00000553686	CT45A7	P0DMV0	189 aa		4.06	□□□□□ -1.76
ATXN3-223	ENST00000553686	CCL18	P55774	89 aa		4.06	□□□□□ -1.76
ATXN3-223	ENST00000553686	HTD2	P86397	168 aa		4.06	□□□□□ -1.76
ATXN3-223	ENST00000553686	RIPK1	Q13546	671 aa		4.06	□□□□□ -1.76
ATXN3-223	ENST00000553686	PTGES3	Q15185	160 aa	Known RBP	4.06	□□□□□ -1.76
ATXN3-223	ENST00000553686	SYT6	Q5T7P8	510 aa	Predicted RBP	4.06	□□□□□ -1.76
ATXN3-223	ENST00000553686	CLEC19A	Q6UXS0	136 aa		4.06	□□□□□ -1.76
ATXN3-223	ENST00000553686	ARHGAP24	Q8N264	748 aa		4.06	□□□□□ -1.76
ATXN3-223	ENST00000553686	PXT1	Q8NFP0	134 aa		4.06	□□□□□ -1.76
ATXN3-223	ENST00000553686	TEX47	Q8TBZ9	253 aa		4.06	□□□□□ -1.76
ATXN3-223	ENST00000553686	FGGY	Q96C11	551 aa		4.06	□□□□□ -1.76
ATXN3-223	ENST00000553686	CPNE2	Q96FN4	548 aa	Predicted RBP	4.06	□□□□□ -1.76
ATXN3-223	ENST00000553686	YPEL2	Q96QA6	119 aa		4.06	□□□□□ -1.76
ATXN3-223	ENST00000553686	PYGO2	Q9BRQ0	406 aa		4.06	□□□□□ -1.76
ATXN3-223	ENST00000553686	TEX12	Q9BXU0	123 aa		4.06	□□□□□ -1.76
ATXN3-223	ENST00000553686	TMEM14B	Q9NUH8	114 aa		4.06	□□□□□ -1.76
ATXN3-223	ENST00000553686	ZNF221	Q9UK13	617 aa		4.06	□□□□□ -1.76
ATXN3-223	ENST00000553686	TBC1D24	Q9ULP9	559 aa		4.06	□□□□□ -1.76
ATXN3-223	ENST00000553686	CELA1	Q9UNI1	258 aa		4.06	□□□□□ -1.76
ATXN3-223	ENST00000553686	ST3GAL6	Q9Y274	331 aa		4.06	□□□□□ -1.76
ATXN3-223	ENST00000553686	RRP15	Q9Y3B9	282 aa	Known RBP	4.06	□□□□□ -1.76
ATXN3-223	ENST00000553686	TMEM189	A5PLL7	270 aa		4.05	□□□□□ -1.76
ATXN3-223	ENST00000553686	ZNF670-ZNF695	F2Z2N8	137 aa		4.05	□□□□□ -1.76
ATXN3-223	ENST00000553686	CCDC22	O60826	627 aa		4.05	□□□□□ -1.76
ATXN3-223	ENST00000553686	OR2J3	O76001	311 aa		4.05	□□□□□ -1.76
ATXN3-223	ENST00000553686	RPP14	O95059	124 aa	Known RBP	4.05	□□□□□ -1.76
ATXN3-223	ENST00000553686	PRH1	P02810	166 aa		4.05	□□□□□ -1.76
ATXN3-223	ENST00000553686	KRT8	P05787	483 aa		4.05	□□□□□ -1.76
ATXN3-223	ENST00000553686	UBC	P0CG48	685 aa	Known RBP	4.05	□□□□□ -1.76
ATXN3-223	ENST00000553686	SPP1	P10451	314 aa		4.05	□□□□□ -1.76
ATXN3-223	ENST00000553686	PSMB6	P28072	239 aa		4.05	□□□□□ -1.76
ATXN3-223	ENST00000553686	PPP1CC	P36873	323 aa	Known RBP	4.05	□□□□□ -1.76
ATXN3-223	ENST00000553686	CAPG	P40121	348 aa		4.05	□□□□□ -1.76
ATXN3-223	ENST00000553686	ASIP	P42127	132 aa		4.05	□□□□□ -1.76
ATXN3-223	ENST00000553686	KRTAP10-1	P60331	282 aa		4.05	□□□□□ -1.76
ATXN3-223	ENST00000553686	CXCR4	P61073	352 aa		4.05	□□□□□ -1.76
ATXN3-223	ENST00000553686	PAFAH1B2	P68402	229 aa		4.05	□□□□□ -1.76
ATXN3-223	ENST00000553686	DLK1	P80370	383 aa		4.05	□□□□□ -1.76
ATXN3-223	ENST00000553686	PJVK	Q0ZLH3	352 aa		4.05	□□□□□ -1.76
ATXN3-223	ENST00000553686	RSU1	Q15404	277 aa		4.05	□□□□□ -1.76
ATXN3-223	ENST00000553686	MAPRE2	Q15555	327 aa		4.05	□□□□□ -1.76
ATXN3-223	ENST00000553686	KISS1	Q15726	138 aa		4.05	□□□□□ -1.76
ATXN3-223	ENST00000553686	TMEM244	Q5VVB8	128 aa		4.05	□□□□□ -1.76
ATXN3-223	ENST00000553686	STH	Q8IWL8	128 aa		4.05	□□□□□ -1.76
ATXN3-223	ENST00000553686	TTC9C	Q8N5M4	171 aa		4.05	□□□□□ -1.76
ATXN3-223	ENST00000553686	EEF1AKMT3	Q96AZ1	226 aa		4.05	□□□□□ -1.76
ATXN3-223	ENST00000553686	ADAT3	Q96EY9	351 aa	Predicted RBP	4.05	□□□□□ -1.76
ATXN3-223	ENST00000553686	PELI1	Q96FA3	418 aa		4.05	□□□□□ -1.76
ATXN3-223	ENST00000553686	SPIN2A	Q99865	258 aa		4.05	□□□□□ -1.76
ATXN3-223	ENST00000553686	SPIN2B	Q9BPZ2	258 aa		4.05	□□□□□ -1.76
ATXN3-223	ENST00000553686	TAF9B	Q9HBM6	251 aa		4.05	□□□□□ -1.76
ATXN3-223	ENST00000553686	SPACA1	Q9HBV2	294 aa		4.05	□□□□□ -1.76
ATXN3-223	ENST00000553686	DAZ1	Q9NQZ3	744 aa	Known RBP	4.05	□□□□□ -1.76
ATXN3-223	ENST00000553686	CMTM6	Q9NX76	183 aa		4.05	□□□□□ -1.76
ATXN3-223	ENST00000553686	TRBV7-1	A0A0A6YYK4	115 aa		4.04	□□□□□ -1.76
ATXN3-223	ENST00000553686	LOC107986453	A0A1B0GWG9	222 aa		4.04	□□□□□ -1.76
ATXN3-223	ENST00000553686		A0A1W2PPQ1	181 aa		4.04	□□□□□ -1.76
ATXN3-223	ENST00000553686	MCRIP1	C9JLW8	97 aa		4.04	□□□□□ -1.76
ATXN3-223	ENST00000553686		H3BN98	237 aa		4.04	□□□□□ -1.76
ATXN3-223	ENST00000553686	TNFRSF11B	O00300	401 aa		4.04	□□□□□ -1.76
ATXN3-223	ENST00000553686	CA11	O75493	328 aa		4.04	□□□□□ -1.76
ATXN3-223	ENST00000553686	DFFB	O76075	338 aa		4.04	□□□□□ -1.76
ATXN3-223	ENST00000553686	CCNB2	O95067	398 aa		4.04	□□□□□ -1.76
ATXN3-223	ENST00000553686	DHFR	P00374	187 aa		4.04	□□□□□ -1.76
ATXN3-223	ENST00000553686	APOA2	P02652	100 aa		4.04	□□□□□ -1.76

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