RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 GABARAPO95166 117 aa9.87□□□□□ -0.83
ACTN1-207ENST00000553290 RLN1P04808 185 aa9.87□□□□□ -0.83
ACTN1-207ENST00000553290 FRMD6-AS1P0C7T7 363 aa9.87□□□□□ -0.83
ACTN1-207ENST00000553290 SMIM18P0DKX4 95 aa9.87□□□□□ -0.83
ACTN1-207ENST00000553290 DEFA4P12838 97 aa9.87□□□□□ -0.83
ACTN1-207ENST00000553290 AREGP15514 252 aa9.87□□□□□ -0.83
ACTN1-207ENST00000553290 ELK1P19419 428 aa9.87□□□□□ -0.83
ACTN1-207ENST00000553290 HLA-DMAP28067 261 aa9.87□□□□□ -0.83
ACTN1-207ENST00000553290 S100GP29377 79 aa9.87□□□□□ -0.83
ACTN1-207ENST00000553290 OR2B8PP59922 312 aa9.87□□□□□ -0.83
ACTN1-207ENST00000553290 ERVK-16P61578 105 aa9.87□□□□□ -0.83
ACTN1-207ENST00000553290 TSPAN5P62079 268 aa9.87□□□□□ -0.83
ACTN1-207ENST00000553290 LCN12Q6JVE5 192 aa9.87□□□□□ -0.83
ACTN1-207ENST00000553290 LPCAT3Q6P1A2 487 aa9.87□□□□□ -0.83
ACTN1-207ENST00000553290 Q8N402 240 aa9.87□□□□□ -0.83
ACTN1-207ENST00000553290 AP3S1Q92572 193 aa9.87□□□□□ -0.83
ACTN1-207ENST00000553290 FANCD2OSQ96PS1 177 aa9.87□□□□□ -0.83
ACTN1-207ENST00000553290 SRSF8Q9BRL6 282 aaKnown RBP9.87□□□□□ -0.83
ACTN1-207ENST00000553290 TMEM140Q9NV12 185 aa9.87□□□□□ -0.83
ACTN1-207ENST00000553290 TENM3Q9P273 2699 aa9.87□□□□□ -0.83
ACTN1-207ENST00000553290 CGB1A6NKQ9 187 aa9.86□□□□□ -0.83
ACTN1-207ENST00000553290 GPR31O00270 319 aa9.86□□□□□ -0.83
ACTN1-207ENST00000553290 HPGDSO60760 199 aa9.86□□□□□ -0.83
ACTN1-207ENST00000553290 GGCTO75223 188 aaKnown RBP9.86□□□□□ -0.83
ACTN1-207ENST00000553290 MYOD1P15172 320 aa9.86□□□□□ -0.83
ACTN1-207ENST00000553290 RCVRNP35243 200 aa9.86□□□□□ -0.83
ACTN1-207ENST00000553290 CTF1Q16619 201 aa9.86□□□□□ -0.83
ACTN1-207ENST00000553290 THOC7Q6I9Y2 204 aaKnown RBP9.86□□□□□ -0.83
ACTN1-207ENST00000553290 C19orf35Q6ZS72 473 aa9.86□□□□□ -0.83
ACTN1-207ENST00000553290 SNX29P2Q8IUI4 249 aa9.86□□□□□ -0.83
ACTN1-207ENST00000553290 SBSPONQ8IVN8 264 aa9.86□□□□□ -0.83
ACTN1-207ENST00000553290 CADM3Q8N126 398 aa9.86□□□□□ -0.83
ACTN1-207ENST00000553290 Q8N1Y9 231 aa9.86□□□□□ -0.83
ACTN1-207ENST00000553290 OR2K2Q8NGT1 345 aa9.86□□□□□ -0.83
ACTN1-207ENST00000553290 EEF1AKMT3Q96AZ1 226 aa9.86□□□□□ -0.83
ACTN1-207ENST00000553290 DGCR14Q96DF8 476 aaKnown RBP9.86□□□□□ -0.83
ACTN1-207ENST00000553290 NAA50Q9GZZ1 169 aaKnown RBP9.86□□□□□ -0.83
ACTN1-207ENST00000553290 FXYD6Q9H0Q3 95 aa9.86□□□□□ -0.83
ACTN1-207ENST00000553290 DMRT1Q9Y5R6 373 aa9.86□□□□□ -0.83
ACTN1-207ENST00000553290 IGLV11-55A0A075B6I3 123 aa9.85□□□□□ -0.83
ACTN1-207ENST00000553290 TRAV3A0A0B4J244 114 aa9.85□□□□□ -0.83
ACTN1-207ENST00000553290 MARCH11A6NNE9 402 aa9.85□□□□□ -0.83
ACTN1-207ENST00000553290 A8MZ25 164 aa9.85□□□□□ -0.83
ACTN1-207ENST00000553290 FAM25AB3EWG3 89 aa9.85□□□□□ -0.83
ACTN1-207ENST00000553290 FAM25CB3EWG5 89 aa9.85□□□□□ -0.83
ACTN1-207ENST00000553290 FAM25GB3EWG6 89 aa9.85□□□□□ -0.83
ACTN1-207ENST00000553290 PPP5D1E7EU14 171 aa9.85□□□□□ -0.83
ACTN1-207ENST00000553290 NDUFB8O95169 186 aa9.85□□□□□ -0.83
ACTN1-207ENST00000553290 REG1AP05451 166 aa9.85□□□□□ -0.83
ACTN1-207ENST00000553290 ZNF182P17025 639 aaPredicted RBP9.85□□□□□ -0.83
ACTN1-207ENST00000553290 LPAR6P43657 344 aa9.85□□□□□ -0.83
ACTN1-207ENST00000553290 HSD17B13Q7Z5P4 300 aaPredicted RBP9.85□□□□□ -0.83
ACTN1-207ENST00000553290 SGPP2Q8IWX5 399 aa9.85□□□□□ -0.83
ACTN1-207ENST00000553290 CXorf58Q96LI9 332 aa9.85□□□□□ -0.83
ACTN1-207ENST00000553290 QTRT1Q9BXR0 403 aaKnown RBP9.85□□□□□ -0.83
ACTN1-207ENST00000553290 FAM212BQ9NTI7 297 aaPredicted RBP9.85□□□□□ -0.83
ACTN1-207ENST00000553290 TRBV7-1A0A0A6YYK4 115 aa9.84□□□□□ -0.83
ACTN1-207ENST00000553290 IGLC7A0M8Q6 106 aa9.84□□□□□ -0.83
ACTN1-207ENST00000553290 LGALS9O00182 355 aa9.84□□□□□ -0.83
ACTN1-207ENST00000553290 CYB5BO43169 146 aa9.84□□□□□ -0.83
ACTN1-207ENST00000553290 TPPPO94811 219 aa9.84□□□□□ -0.83
ACTN1-207ENST00000553290 TRAPPC2P0DI81 140 aa9.84□□□□□ -0.83
ACTN1-207ENST00000553290 TRAPPC2BP0DI82 140 aa9.84□□□□□ -0.83
ACTN1-207ENST00000553290 IGHV4-30-4P0DP06 118 aa9.84□□□□□ -0.83
ACTN1-207ENST00000553290 RPA2P15927 270 aa9.84□□□□□ -0.83
ACTN1-207ENST00000553290 ARL3P36405 182 aa9.84□□□□□ -0.83
ACTN1-207ENST00000553290 MECP2P51608 486 aaKnown RBP9.84□□□□□ -0.83
ACTN1-207ENST00000553290 UCP3P55916 312 aa9.84□□□□□ -0.83
ACTN1-207ENST00000553290 GPR107Q5VW38 600 aa9.84□□□□□ -0.83
ACTN1-207ENST00000553290 CLEC19AQ6UXS0 136 aa9.84□□□□□ -0.83
ACTN1-207ENST00000553290 GTSCR1Q86UQ5 136 aa9.84□□□□□ -0.83
ACTN1-207ENST00000553290 GPHB5Q86YW7 130 aa9.84□□□□□ -0.83
ACTN1-207ENST00000553290 OR1L8Q8NGR8 309 aa9.84□□□□□ -0.83
ACTN1-207ENST00000553290 FCAMRQ8WWV6 532 aa9.84□□□□□ -0.83
ACTN1-207ENST00000553290 CCDC140Q96MF4 163 aa9.84□□□□□ -0.83
ACTN1-207ENST00000553290 MRPS26Q9BYN8 205 aaKnown RBP9.84□□□□□ -0.83
ACTN1-207ENST00000553290 ZMAT4Q9H898 229 aa9.84□□□□□ -0.83
ACTN1-207ENST00000553290 THYN1Q9P016 225 aa9.84□□□□□ -0.83
ACTN1-207ENST00000553290 TEX50A0A1B0GTY4 177 aa9.83□□□□□ -0.84
ACTN1-207ENST00000553290 SNAPC5O75971 98 aa9.83□□□□□ -0.84
ACTN1-207ENST00000553290 OR2C1O95371 312 aa9.83□□□□□ -0.84
ACTN1-207ENST00000553290 KRASP01116 189 aa9.83□□□□□ -0.84
ACTN1-207ENST00000553290 IGHV3-23P01764 117 aa9.83□□□□□ -0.84
ACTN1-207ENST00000553290 FAM106AQ4KMX7 169 aa9.83□□□□□ -0.84
ACTN1-207ENST00000553290 ZNF585BQ52M93 769 aa9.83□□□□□ -0.84
ACTN1-207ENST00000553290 PHLDA2Q53GA4 152 aa9.83□□□□□ -0.84
ACTN1-207ENST00000553290 GPR141Q7Z602 305 aa9.83□□□□□ -0.84
ACTN1-207ENST00000553290 SLC38A6Q8IZM9 456 aa9.83□□□□□ -0.84
ACTN1-207ENST00000553290 C15orf40Q8WUR7 153 aa9.83□□□□□ -0.84
ACTN1-207ENST00000553290 THAP7Q9BT49 309 aaPredicted RBP9.83□□□□□ -0.84
ACTN1-207ENST00000553290 C19orf73Q9NVV2 129 aa9.83□□□□□ -0.84
ACTN1-207ENST00000553290 FKBP11Q9NYL4 201 aa9.83□□□□□ -0.84
ACTN1-207ENST00000553290 IZUMO1RA6ND01 250 aa9.82□□□□□ -0.84
ACTN1-207ENST00000553290 C2orf70A6NJV1 201 aa9.82□□□□□ -0.84
ACTN1-207ENST00000553290 HLA-AP01891 365 aaKnown RBP9.82□□□□□ -0.84
ACTN1-207ENST00000553290 IFNA6P05013 189 aa9.82□□□□□ -0.84
ACTN1-207ENST00000553290 SERPINE2P07093 398 aa9.82□□□□□ -0.84
ACTN1-207ENST00000553290 OR13C7P0DN81 318 aa9.82□□□□□ -0.84
ACTN1-207ENST00000553290 TBPP20226 339 aa9.82□□□□□ -0.84
ACTN1-207ENST00000553290 G6PCP35575 357 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms