RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 A0A1B0GW15 77 aa9.76□□□□□ -0.85
SYNE2-208ENST00000553289 RBFOX2O43251 390 aaKnown RBP eCLIP9.76□□□□□ -0.85
SYNE2-208ENST00000553289 IL4P05112 153 aa9.76□□□□□ -0.85
SYNE2-208ENST00000553289 ATP1A1-AS1Q5TC04 95 aa9.76□□□□□ -0.85
SYNE2-208ENST00000553289 ZNRF1Q8ND25 227 aa9.76□□□□□ -0.85
SYNE2-208ENST00000553289 EAF1Q96JC9 268 aaPredicted RBP9.76□□□□□ -0.85
SYNE2-208ENST00000553289 FBLL1A6NHQ2 334 aaKnown RBP9.76□□□□□ -0.85
SYNE2-208ENST00000553289 PPP1R17O96001 155 aa9.76□□□□□ -0.85
SYNE2-208ENST00000553289 MPZP25189 248 aa9.76□□□□□ -0.85
SYNE2-208ENST00000553289 RPL39P5Q59GN2 51 aa9.76□□□□□ -0.85
SYNE2-208ENST00000553289 GPR82Q96P67 336 aa9.76□□□□□ -0.85
SYNE2-208ENST00000553289 IL36BQ9NZH7 164 aa9.76□□□□□ -0.85
SYNE2-208ENST00000553289 DPM3Q9P2X0 92 aa9.76□□□□□ -0.85
SYNE2-208ENST00000553289 HINT1P49773 126 aaPredicted RBP9.76□□□□□ -0.85
SYNE2-208ENST00000553289 SNRPD3P62318 126 aaKnown RBP9.76□□□□□ -0.85
SYNE2-208ENST00000553289 JOSD1Q15040 202 aaPredicted RBP9.76□□□□□ -0.85
SYNE2-208ENST00000553289 KIR2DL4Q99706 377 aa9.76□□□□□ -0.85
SYNE2-208ENST00000553289 REG1AP05451 166 aa9.76□□□□□ -0.85
SYNE2-208ENST00000553289 LINC00271P0C7V0 271 aa9.76□□□□□ -0.85
SYNE2-208ENST00000553289 LGALS3P17931 250 aaKnown RBP9.76□□□□□ -0.85
SYNE2-208ENST00000553289 CIRBPQ14011 172 aaKnown RBP9.76□□□□□ -0.85
SYNE2-208ENST00000553289 ADIPOQQ15848 244 aa9.76□□□□□ -0.85
SYNE2-208ENST00000553289 DNLZQ5SXM8 178 aa9.76□□□□□ -0.85
SYNE2-208ENST00000553289 VWCEQ96DN2 955 aa9.76□□□□□ -0.85
SYNE2-208ENST00000553289 PATJQ8NI35 1801 aa9.76□□□□□ -0.85
SYNE2-208ENST00000553289 BRCA1P38398 1863 aaKnown RBP9.75□□□□□ -0.85
SYNE2-208ENST00000553289 IGHV2OR16-5A0A0B4J2B6 119 aa9.75□□□□□ -0.85
SYNE2-208ENST00000553289 MSGN1A6NI15 193 aa9.75□□□□□ -0.85
SYNE2-208ENST00000553289 EIF3GO75821 320 aaKnown RBP eCLIP9.75□□□□□ -0.85
SYNE2-208ENST00000553289 SRP19P09132 144 aaKnown RBP9.75□□□□□ -0.85
SYNE2-208ENST00000553289 Q6AWC8 147 aa9.75□□□□□ -0.85
SYNE2-208ENST00000553289 RNF222A6NCQ9 220 aa9.75□□□□□ -0.85
SYNE2-208ENST00000553289 TBX6O95947 436 aaPredicted RBP9.75□□□□□ -0.85
SYNE2-208ENST00000553289 LINC00312Q9Y6C7 94 aa9.75□□□□□ -0.85
SYNE2-208ENST00000553289 RRHO14718 337 aa9.75□□□□□ -0.85
SYNE2-208ENST00000553289 NBEAP1P0C6P0 100 aa9.75□□□□□ -0.85
SYNE2-208ENST00000553289 HIST1H4GQ99525 98 aa9.75□□□□□ -0.85
SYNE2-208ENST00000553289 TRBV6-7A0A0A0MS04 114 aa9.75□□□□□ -0.85
SYNE2-208ENST00000553289 ATP5J2P56134 94 aa9.75□□□□□ -0.85
SYNE2-208ENST00000553289 DLX6P56179 175 aa9.75□□□□□ -0.85
SYNE2-208ENST00000553289 FAM57AQ8TBR7 257 aa9.75□□□□□ -0.85
SYNE2-208ENST00000553289 FAM131CQ96AQ9 280 aa9.74□□□□□ -0.85
SYNE2-208ENST00000553289 FMC1Q96HJ9 113 aa9.74□□□□□ -0.85
SYNE2-208ENST00000553289 NEU1Q99519 415 aa9.74□□□□□ -0.85
SYNE2-208ENST00000553289 C9orf172C9J069 976 aa9.74□□□□□ -0.85
SYNE2-208ENST00000553289 ACSF3Q4G176 576 aaPredicted RBP9.74□□□□□ -0.85
SYNE2-208ENST00000553289 RAXQ9Y2V3 346 aa9.74□□□□□ -0.85
SYNE2-208ENST00000553289 CGB1A6NKQ9 187 aa9.74□□□□□ -0.85
SYNE2-208ENST00000553289 C17orf98A8MV24 154 aa9.74□□□□□ -0.85
SYNE2-208ENST00000553289 LYPD3O95274 346 aa9.74□□□□□ -0.85
SYNE2-208ENST00000553289 CELA3AP09093 270 aa9.74□□□□□ -0.85
SYNE2-208ENST00000553289 TAS2R60P59551 318 aa9.74□□□□□ -0.85
SYNE2-208ENST00000553289 OR13A1Q8NGR1 328 aa9.74□□□□□ -0.85
SYNE2-208ENST00000553289 WDYHV1Q96HA8 205 aa9.74□□□□□ -0.85
SYNE2-208ENST00000553289 TUBA4BQ9H853 241 aa9.74□□□□□ -0.85
SYNE2-208ENST00000553289 PSG7Q13046 419 aa9.74□□□□□ -0.85
SYNE2-208ENST00000553289 C18orf12Q96KH6 178 aa9.74□□□□□ -0.85
SYNE2-208ENST00000553289 MRPS16Q9Y3D3 137 aaKnown RBP9.74□□□□□ -0.85
SYNE2-208ENST00000553289 MOSP00540 346 aa9.73□□□□□ -0.85
SYNE2-208ENST00000553289 FAM159AQ6UWV7 190 aa9.73□□□□□ -0.85
SYNE2-208ENST00000553289 J3QRE1 110 aa9.73□□□□□ -0.85
SYNE2-208ENST00000553289 PEX7O00628 323 aa9.73□□□□□ -0.85
SYNE2-208ENST00000553289 SAMD13Q5VXD3 122 aa9.73□□□□□ -0.85
SYNE2-208ENST00000553289 ZNF525Q8N782 197 aa9.73□□□□□ -0.85
SYNE2-208ENST00000553289 LRTM2Q8N967 370 aa9.73□□□□□ -0.85
SYNE2-208ENST00000553289 OR4D5Q8NGN0 318 aa9.73□□□□□ -0.85
SYNE2-208ENST00000553289 PSME4Q14997 1843 aa9.73□□□□□ -0.85
SYNE2-208ENST00000553289 NPIPB7O75200 414 aa9.73□□□□□ -0.85
SYNE2-208ENST00000553289 TBR1Q16650 682 aa9.73□□□□□ -0.85
SYNE2-208ENST00000553289 FAM89BQ8N5H3 189 aa9.73□□□□□ -0.85
SYNE2-208ENST00000553289 FLVCR1-AS1Q8TAF5 88 aa9.73□□□□□ -0.85
SYNE2-208ENST00000553289 SIPA1L1O43166 1804 aa9.73□□□□□ -0.85
SYNE2-208ENST00000553289 LOC285556D6RIA3 1793 aa9.73□□□□□ -0.85
SYNE2-208ENST00000553289 TRAV14DV4A0A0A6YYC5 116 aa9.73□□□□□ -0.85
SYNE2-208ENST00000553289 A0A0G2JLM5 398 aa9.73□□□□□ -0.85
SYNE2-208ENST00000553289 LOC107984156A0A0G2JMH3 177 aa9.73□□□□□ -0.85
SYNE2-208ENST00000553289 H7C1H1 209 aa9.73□□□□□ -0.85
SYNE2-208ENST00000553289 YPEL1O60688 119 aa9.73□□□□□ -0.85
SYNE2-208ENST00000553289 IGHV1-2P23083 117 aa9.73□□□□□ -0.85
SYNE2-208ENST00000553289 UQCRFS1P47985 274 aa9.73□□□□□ -0.85
SYNE2-208ENST00000553289 PLP1P60201 277 aa9.73□□□□□ -0.85
SYNE2-208ENST00000553289 MBNL2Q5VZF2 373 aaKnown RBP9.73□□□□□ -0.85
SYNE2-208ENST00000553289 ARL17AQ8IVW1 177 aa9.73□□□□□ -0.85
SYNE2-208ENST00000553289 YPEL2Q96QA6 119 aa9.73□□□□□ -0.85
SYNE2-208ENST00000553289 MOB4Q9Y3A3 225 aa9.73□□□□□ -0.85
SYNE2-208ENST00000553289 ICAM4Q14773 271 aa9.72□□□□□ -0.85
SYNE2-208ENST00000553289 KIAA1644Q3SXP7 199 aa9.72□□□□□ -0.85
SYNE2-208ENST00000553289 FAM209BQ5JX69 171 aa9.72□□□□□ -0.85
SYNE2-208ENST00000553289 TEX45Q8NA69 505 aa9.72□□□□□ -0.85
SYNE2-208ENST00000553289 SSBP3Q9BWW4 388 aaPredicted RBP9.72□□□□□ -0.85
SYNE2-208ENST00000553289 PIKFYVEQ9Y2I7 2098 aa9.72□□□□□ -0.85
SYNE2-208ENST00000553289 UMODP07911 640 aa9.72□□□□□ -0.85
SYNE2-208ENST00000553289 PEAR1Q5VY43 1037 aaPredicted RBP9.72□□□□□ -0.85
SYNE2-208ENST00000553289 CYB5R2Q6BCY4 276 aa9.72□□□□□ -0.85
SYNE2-208ENST00000553289 DUX5Q96PT3 197 aa9.72□□□□□ -0.85
SYNE2-208ENST00000553289 TRBV20OR9-2A0A075B6H5 130 aa9.72□□□□□ -0.85
SYNE2-208ENST00000553289 CEACAM1P13688 526 aa9.72□□□□□ -0.85
SYNE2-208ENST00000553289 IGFBP2P18065 325 aa9.72□□□□□ -0.85
SYNE2-208ENST00000553289 BTCP35070 178 aa9.72□□□□□ -0.85
SYNE2-208ENST00000553289 TMEM136Q6ZRR5 245 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms